RNA–Protein interactions for RNA: ENST00000463837.5

CCDC88B-204, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 2

Gene CCDC88B, Length 5,235 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-204ENST00000463837 CDPF1Q6NVV7 123 aa15.32■□□□□ 0.04
CCDC88B-204ENST00000463837 FAM223AQ8IWN6 122 aa15.32■□□□□ 0.04
CCDC88B-204ENST00000463837 K7EP34 96 aa15.31■□□□□ 0.04
CCDC88B-204ENST00000463837 WDR86Q86TI4 376 aa15.31■□□□□ 0.04
CCDC88B-204ENST00000463837 C14orf178Q8N769 122 aaPredicted RBP15.31■□□□□ 0.04
CCDC88B-204ENST00000463837 C15orf65H3BRN8 121 aa15.31■□□□□ 0.04
CCDC88B-204ENST00000463837 SPINK8P0C7L1 97 aa15.31■□□□□ 0.04
CCDC88B-204ENST00000463837 KLRD1Q13241 179 aa15.31■□□□□ 0.04
CCDC88B-204ENST00000463837 SIVA1O15304 175 aa15.31■□□□□ 0.04
CCDC88B-204ENST00000463837 POU2AF1Q16633 256 aa15.31■□□□□ 0.04
CCDC88B-204ENST00000463837 Q6ZSR3 168 aa15.31■□□□□ 0.04
CCDC88B-204ENST00000463837 LINC00311Q8N616 119 aa15.31■□□□□ 0.04
CCDC88B-204ENST00000463837 ZNF876PQ49A33 203 aa15.3■□□□□ 0.04
CCDC88B-204ENST00000463837 SPAG8Q99932 426 aaPredicted RBP15.3■□□□□ 0.04
CCDC88B-204ENST00000463837 PRR20EP86478 221 aa15.3■□□□□ 0.04
CCDC88B-204ENST00000463837 PRR20CP86479 221 aa15.3■□□□□ 0.04
CCDC88B-204ENST00000463837 PRR20DP86480 221 aa15.3■□□□□ 0.04
CCDC88B-204ENST00000463837 PRR20BP86481 221 aa15.3■□□□□ 0.04
CCDC88B-204ENST00000463837 PRR20AP86496 221 aa15.3■□□□□ 0.04
CCDC88B-204ENST00000463837 KLF5Q13887 457 aaPredicted RBP15.3■□□□□ 0.04
CCDC88B-204ENST00000463837 C1orf122Q6ZSJ8 110 aa15.3■□□□□ 0.04
CCDC88B-204ENST00000463837 SSC4DQ8WTU2 575 aa15.3■□□□□ 0.04
CCDC88B-204ENST00000463837 USMG5Q96IX5 58 aa15.3■□□□□ 0.04
CCDC88B-204ENST00000463837 WNK2Q9Y3S1 2297 aa15.3■□□□□ 0.04
CCDC88B-204ENST00000463837 CFHR2P36980 270 aa15.3■□□□□ 0.04
CCDC88B-204ENST00000463837 TMEM213A2RRL7 107 aa15.3■□□□□ 0.04
CCDC88B-204ENST00000463837 NDPQ00604 133 aa15.3■□□□□ 0.04
CCDC88B-204ENST00000463837 C2orf82Q6UX34 121 aa15.3■□□□□ 0.04
CCDC88B-204ENST00000463837 THAP8Q8NA92 274 aa15.3■□□□□ 0.04
CCDC88B-204ENST00000463837 F8W1H4 67 aa15.3■□□□□ 0.04
CCDC88B-204ENST00000463837 C17orf58Q2M2W7 97 aa15.3■□□□□ 0.04
CCDC88B-204ENST00000463837 LYPD6Q86Y78 171 aa15.3■□□□□ 0.04
CCDC88B-204ENST00000463837 OVOL2Q9BRP0 275 aa15.3■□□□□ 0.04
CCDC88B-204ENST00000463837 TRBV20-1A0A075B6N2 111 aa15.29■□□□□ 0.04
CCDC88B-204ENST00000463837 ZNRD1Q9P1U0 126 aa15.29■□□□□ 0.04
CCDC88B-204ENST00000463837 SRRM4A7MD48 611 aaKnown RBP15.29■□□□□ 0.04
CCDC88B-204ENST00000463837 TAL2Q16559 108 aa15.29■□□□□ 0.04
CCDC88B-204ENST00000463837 PI4KAP42356 2102 aa15.28■□□□□ 0.04
CCDC88B-204ENST00000463837 HEATR5AQ86XA9 2040 aa15.28■□□□□ 0.04
CCDC88B-204ENST00000463837 RASL10AQ92737 203 aa15.28■□□□□ 0.04
CCDC88B-204ENST00000463837 COL6A6A6NMZ7 2263 aa15.28■□□□□ 0.04
CCDC88B-204ENST00000463837 NEGR1Q7Z3B1 354 aa15.28■□□□□ 0.04
CCDC88B-204ENST00000463837 IGHV3-73A0A0B4J1V6 119 aa15.27■□□□□ 0.04
CCDC88B-204ENST00000463837 K7EP13 123 aa15.27■□□□□ 0.04
CCDC88B-204ENST00000463837 SLC25A20O43772 301 aa15.27■□□□□ 0.04
CCDC88B-204ENST00000463837 SLC25A16P16260 332 aa15.27■□□□□ 0.04
CCDC88B-204ENST00000463837 TMEM86BQ8N661 226 aa15.27■□□□□ 0.04
CCDC88B-204ENST00000463837 TMEM141Q96I45 108 aa15.27■□□□□ 0.04
CCDC88B-204ENST00000463837 LYPD2Q6UXB3 125 aa15.27■□□□□ 0.03
CCDC88B-204ENST00000463837 Q6ZR03 302 aa15.27■□□□□ 0.03
CCDC88B-204ENST00000463837 ABCA4P78363 2273 aa15.27■□□□□ 0.03
CCDC88B-204ENST00000463837 A0A0G2JNJ9 132 aa15.27■□□□□ 0.03
CCDC88B-204ENST00000463837 BVES-AS1Q5T3Y7 98 aa15.27■□□□□ 0.03
CCDC88B-204ENST00000463837 Q9UFV3 132 aa15.27■□□□□ 0.03
CCDC88B-204ENST00000463837 ERCC8Q13216 396 aa15.26■□□□□ 0.03
CCDC88B-204ENST00000463837 HEATR1Q9H583 2144 aaKnown RBP15.26■□□□□ 0.03
CCDC88B-204ENST00000463837 ADARB2-AS1A8MUL3 147 aa15.26■□□□□ 0.03
CCDC88B-204ENST00000463837 MRPL51Q4U2R6 128 aaKnown RBP15.26■□□□□ 0.03
CCDC88B-204ENST00000463837 TMEM219Q86XT9 240 aa15.26■□□□□ 0.03
CCDC88B-204ENST00000463837 K7EN84 100 aa15.26■□□□□ 0.03
CCDC88B-204ENST00000463837 DIDO1Q9BTC0 2240 aaKnown RBP15.25■□□□□ 0.03
CCDC88B-204ENST00000463837 LINC00158P58513 81 aa15.25■□□□□ 0.03
CCDC88B-204ENST00000463837 PRSS57Q6UWY2 283 aa15.25■□□□□ 0.03
CCDC88B-204ENST00000463837 FXYD5Q96DB9 178 aa15.25■□□□□ 0.03
CCDC88B-204ENST00000463837 H3BRN7 92 aa15.25■□□□□ 0.03
CCDC88B-204ENST00000463837 DTX2Q86UW9 622 aa15.25■□□□□ 0.03
CCDC88B-204ENST00000463837 GPR179Q6PRD1 2367 aa15.25■□□□□ 0.03
CCDC88B-204ENST00000463837 ANAPC1Q9H1A4 1944 aa15.25■□□□□ 0.03
CCDC88B-204ENST00000463837 MYMXA0A1B0GTQ4 84 aa15.25■□□□□ 0.03
CCDC88B-204ENST00000463837 C9JAW5 83 aa15.25■□□□□ 0.03
CCDC88B-204ENST00000463837 THADAQ6YHU6 1953 aa15.25■□□□□ 0.03
CCDC88B-204ENST00000463837 DOCK10Q96BY6 2186 aa15.25■□□□□ 0.03
CCDC88B-204ENST00000463837 LGALS1P09382 135 aaKnown RBP15.24■□□□□ 0.03
CCDC88B-204ENST00000463837 MALP21145 153 aa15.24■□□□□ 0.03
CCDC88B-204ENST00000463837 OR11H6Q8NGC7 330 aa15.24■□□□□ 0.03
CCDC88B-204ENST00000463837 RCHY1Q96PM5 261 aa15.24■□□□□ 0.03
CCDC88B-204ENST00000463837 NSUN5P1Q3KNT7 163 aa15.24■□□□□ 0.03
CCDC88B-204ENST00000463837 DOCK9Q9BZ29 2069 aa15.24■□□□□ 0.03
CCDC88B-204ENST00000463837 ZNF415Q09FC8 603 aa15.24■□□□□ 0.03
CCDC88B-204ENST00000463837 TEX36Q5VZQ5 186 aa15.24■□□□□ 0.03
CCDC88B-204ENST00000463837 C8orf49Q96NF6 230 aa15.24■□□□□ 0.03
CCDC88B-204ENST00000463837 FAM110DQ8TAY7 271 aaPredicted RBP15.24■□□□□ 0.03
CCDC88B-204ENST00000463837 TIMM21Q9BVV7 248 aa15.24■□□□□ 0.03
CCDC88B-204ENST00000463837 A0A1W2PPM0 123 aa15.23■□□□□ 0.03
CCDC88B-204ENST00000463837 SPTAN1Q13813 2472 aaKnown RBP15.23■□□□□ 0.03
CCDC88B-204ENST00000463837 IGLC7A0M8Q6 106 aa15.23■□□□□ 0.03
CCDC88B-204ENST00000463837 ASPHD1Q5U4P2 390 aa15.23■□□□□ 0.03
CCDC88B-204ENST00000463837 BOD1L2Q8IYS8 172 aa15.23■□□□□ 0.03
CCDC88B-204ENST00000463837 LY6G5BQ8NDX9 201 aa15.23■□□□□ 0.03
CCDC88B-204ENST00000463837 PLA2G2EQ9NZK7 142 aa15.23■□□□□ 0.03
CCDC88B-204ENST00000463837 PKDREJQ9NTG1 2253 aa15.23■□□□□ 0.03
CCDC88B-204ENST00000463837 K7EM74 188 aa15.23■□□□□ 0.03
CCDC88B-204ENST00000463837 CRPP02741 224 aa15.23■□□□□ 0.03
CCDC88B-204ENST00000463837 SIGLEC8Q9NYZ4 499 aa15.23■□□□□ 0.03
CCDC88B-204ENST00000463837 CADP27708 2225 aa15.23■□□□□ 0.03
CCDC88B-204ENST00000463837 LTAP01374 205 aa15.23■□□□□ 0.03
CCDC88B-204ENST00000463837 PLXND1Q9Y4D7 1925 aa15.23■□□□□ 0.03
CCDC88B-204ENST00000463837 ZNF503-AS2A6NEH8 195 aa15.22■□□□□ 0.03
CCDC88B-204ENST00000463837 RNF138Q8WVD3 245 aa15.22■□□□□ 0.03
CCDC88B-204ENST00000463837 PPDPFLQ8WWR9 84 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms