RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 Q6ZS92 163 aa2.85□□□□□ -1.95
COL8A1-205ENST00000463753 KRTAP19-1Q8IUB9 90 aa2.85□□□□□ -1.95
COL8A1-205ENST00000463753 EXOC3-AS1Q8N2X6 119 aa2.85□□□□□ -1.95
COL8A1-205ENST00000463753 OR11H6Q8NGC7 330 aa2.85□□□□□ -1.95
COL8A1-205ENST00000463753 OR9G1Q8NH87 305 aa2.85□□□□□ -1.95
COL8A1-205ENST00000463753 NPIPB3Q92617 1050 aa2.85□□□□□ -1.95
COL8A1-205ENST00000463753 JPT2Q9H910 190 aa2.85□□□□□ -1.95
COL8A1-205ENST00000463753 CHCHD2Q9Y6H1 151 aaPredicted RBP2.85□□□□□ -1.95
COL8A1-205ENST00000463753 ESPL1Q14674 2120 aa2.85□□□□□ -1.95
COL8A1-205ENST00000463753 TRAV40A0A0B4J280 105 aa2.85□□□□□ -1.95
COL8A1-205ENST00000463753 FRG2CA6NGY1 282 aa2.85□□□□□ -1.95
COL8A1-205ENST00000463753 SMKR1H3BMG3 65 aa2.85□□□□□ -1.95
COL8A1-205ENST00000463753 H3BTX0 84 aa2.85□□□□□ -1.95
COL8A1-205ENST00000463753 UQCRQO14949 82 aa2.85□□□□□ -1.95
COL8A1-205ENST00000463753 TIMM8AO60220 97 aaPredicted RBP2.85□□□□□ -1.95
COL8A1-205ENST00000463753 NDUFA3O95167 84 aa2.85□□□□□ -1.95
COL8A1-205ENST00000463753 IGLV2-14P01704 120 aa2.85□□□□□ -1.95
COL8A1-205ENST00000463753 IGHG4P01861 327 aa2.85□□□□□ -1.95
COL8A1-205ENST00000463753 IGHMP01871 453 aa2.85□□□□□ -1.95
COL8A1-205ENST00000463753 PYYP10082 97 aa2.85□□□□□ -1.95
COL8A1-205ENST00000463753 MALP21145 153 aa2.85□□□□□ -1.95
COL8A1-205ENST00000463753 TNFAIP6P98066 277 aaPredicted RBP2.85□□□□□ -1.95
COL8A1-205ENST00000463753 LINC00322Q6ZN03 302 aaPredicted RBP2.85□□□□□ -1.95
COL8A1-205ENST00000463753 LINC00336Q6ZUF6 198 aa2.85□□□□□ -1.95
COL8A1-205ENST00000463753 MDP1Q86V88 176 aa2.85□□□□□ -1.95
COL8A1-205ENST00000463753 DRAM1Q8N682 238 aa2.85□□□□□ -1.95
COL8A1-205ENST00000463753 IGFBPL1Q8WX77 278 aa2.85□□□□□ -1.95
COL8A1-205ENST00000463753 RTL8AQ9BWD3 113 aa2.85□□□□□ -1.95
COL8A1-205ENST00000463753 IFI27L2Q9H2X8 130 aa2.85□□□□□ -1.95
COL8A1-205ENST00000463753 PROK2Q9HC23 129 aa2.85□□□□□ -1.95
COL8A1-205ENST00000463753 PRO0628Q9UI54 55 aa2.85□□□□□ -1.95
COL8A1-205ENST00000463753 WDFY3Q8IZQ1 3526 aa2.85□□□□□ -1.95
COL8A1-205ENST00000463753 NCBP2LA6PVI3 153 aaKnown RBP2.85□□□□□ -1.95
COL8A1-205ENST00000463753 FAM90A5PA8MXJ8 464 aa2.85□□□□□ -1.95
COL8A1-205ENST00000463753 TMEM150CB9EJG8 249 aa2.85□□□□□ -1.95
COL8A1-205ENST00000463753 PEX7O00628 323 aa2.85□□□□□ -1.95
COL8A1-205ENST00000463753 OXTP01178 125 aa2.85□□□□□ -1.95
COL8A1-205ENST00000463753 IGHV4-39P01824 125 aa2.85□□□□□ -1.95
COL8A1-205ENST00000463753 ARMS2P0C7Q2 107 aa2.85□□□□□ -1.95
COL8A1-205ENST00000463753 EFNA4P52798 201 aa2.85□□□□□ -1.95
COL8A1-205ENST00000463753 RPL11P62913 178 aaKnown RBP2.85□□□□□ -1.95
COL8A1-205ENST00000463753 ADORA2A-AS1P86434 159 aa2.85□□□□□ -1.95
COL8A1-205ENST00000463753 NSUN5P1Q3KNT7 163 aa2.85□□□□□ -1.95
COL8A1-205ENST00000463753 CLLU1OSQ5K130 101 aa2.85□□□□□ -1.95
COL8A1-205ENST00000463753 FAM53AQ6NSI3 398 aaPredicted RBP2.85□□□□□ -1.95
COL8A1-205ENST00000463753 SCGB1D4Q6XE38 83 aa2.85□□□□□ -1.95
COL8A1-205ENST00000463753 FAM231DQ6ZW35 169 aa2.85□□□□□ -1.95
COL8A1-205ENST00000463753 VKORC1L1Q8N0U8 176 aa2.85□□□□□ -1.95
COL8A1-205ENST00000463753 RFESDQ8TAC1 157 aa2.85□□□□□ -1.95
COL8A1-205ENST00000463753 IL17DQ8TAD2 202 aa2.85□□□□□ -1.95
COL8A1-205ENST00000463753 SLC37A2Q8TED4 501 aa2.85□□□□□ -1.95
COL8A1-205ENST00000463753 C10orf105Q8TEF2 133 aa2.85□□□□□ -1.95
COL8A1-205ENST00000463753 COQ2Q96H96 371 aa2.85□□□□□ -1.95
COL8A1-205ENST00000463753 NXT2Q9NPJ8 142 aaKnown RBP2.85□□□□□ -1.95
COL8A1-205ENST00000463753 OCIAD1Q9NX40 245 aa2.85□□□□□ -1.95
COL8A1-205ENST00000463753 ALKBH4Q9NXW9 302 aa2.85□□□□□ -1.95
COL8A1-205ENST00000463753 HHLA3Q9XRX5 114 aa2.85□□□□□ -1.95
COL8A1-205ENST00000463753 KNTC1P50748 2209 aa2.84□□□□□ -1.95
COL8A1-205ENST00000463753 C17orf98A8MV24 154 aa2.84□□□□□ -1.95
COL8A1-205ENST00000463753 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.84□□□□□ -1.95
COL8A1-205ENST00000463753 M0R2P5 195 aa2.84□□□□□ -1.95
COL8A1-205ENST00000463753 TIMM23O14925 209 aa2.84□□□□□ -1.95
COL8A1-205ENST00000463753 PLAUP00749 431 aa2.84□□□□□ -1.95
COL8A1-205ENST00000463753 NPYP01303 97 aa2.84□□□□□ -1.95
COL8A1-205ENST00000463753 TRACP01848 142 aa2.84□□□□□ -1.95
COL8A1-205ENST00000463753 CNTFRP26992 372 aa2.84□□□□□ -1.95
COL8A1-205ENST00000463753 Q5XG85 94 aa2.84□□□□□ -1.95
COL8A1-205ENST00000463753 AMN1Q8IY45 258 aa2.84□□□□□ -1.95
COL8A1-205ENST00000463753 UNC13CQ8NB66 2214 aa2.84□□□□□ -1.95
COL8A1-205ENST00000463753 WFDC11Q8NEX6 87 aa2.84□□□□□ -1.95
COL8A1-205ENST00000463753 TRGV9Q99603 122 aa2.84□□□□□ -1.95
COL8A1-205ENST00000463753 SIRPDQ9H106 197 aa2.84□□□□□ -1.95
COL8A1-205ENST00000463753 BEX4Q9NWD9 120 aaPredicted RBP2.84□□□□□ -1.95
COL8A1-205ENST00000463753 RPUSD1Q9UJJ7 312 aaKnown RBP2.84□□□□□ -1.95
COL8A1-205ENST00000463753 MYOFQ9NZM1 2061 aa2.84□□□□□ -1.95
COL8A1-205ENST00000463753 CHD9Q3L8U1 2897 aa2.84□□□□□ -1.96
COL8A1-205ENST00000463753 TRBV7-3A0A075B6L6 115 aa2.84□□□□□ -1.96
COL8A1-205ENST00000463753 WI2-2373I1.2A0A1W2PRP0 233 aa2.84□□□□□ -1.96
COL8A1-205ENST00000463753 C15orf65H3BRN8 121 aa2.84□□□□□ -1.96
COL8A1-205ENST00000463753 K7EM74 188 aa2.84□□□□□ -1.96
COL8A1-205ENST00000463753 MRPS12O15235 138 aaKnown RBP2.84□□□□□ -1.96
COL8A1-205ENST00000463753 DPM2O94777 84 aa2.84□□□□□ -1.96
COL8A1-205ENST00000463753 PATE4P0C8F1 98 aa2.84□□□□□ -1.96
COL8A1-205ENST00000463753 DLX6P56179 175 aa2.84□□□□□ -1.96
COL8A1-205ENST00000463753 TWIST1Q15672 202 aa2.84□□□□□ -1.96
COL8A1-205ENST00000463753 PDPNQ86YL7 162 aa2.84□□□□□ -1.96
COL8A1-205ENST00000463753 MBD3L2Q8NHZ7 208 aaPredicted RBP2.84□□□□□ -1.96
COL8A1-205ENST00000463753 SPTSSAQ969W0 71 aa2.84□□□□□ -1.96
COL8A1-205ENST00000463753 LINC00526Q96FQ7 95 aa2.84□□□□□ -1.96
COL8A1-205ENST00000463753 DPH3Q96FX2 82 aa2.84□□□□□ -1.96
COL8A1-205ENST00000463753 CYSTM1Q9H1C7 97 aa2.84□□□□□ -1.96
COL8A1-205ENST00000463753 CABIN1Q9Y6J0 2220 aa2.84□□□□□ -1.96
COL8A1-205ENST00000463753 CHD8Q9HCK8 2581 aa2.83□□□□□ -1.96
COL8A1-205ENST00000463753 A0A1B0GUT8 65 aa2.83□□□□□ -1.96
COL8A1-205ENST00000463753 INS-IGF2F8WCM5 200 aa2.83□□□□□ -1.96
COL8A1-205ENST00000463753 H3BMM0 161 aa2.83□□□□□ -1.96
COL8A1-205ENST00000463753 OVOL1O14753 267 aa2.83□□□□□ -1.96
COL8A1-205ENST00000463753 LEPP41159 167 aa2.83□□□□□ -1.96
COL8A1-205ENST00000463753 ERVK-16P61578 105 aa2.83□□□□□ -1.96
COL8A1-205ENST00000463753 EDDM3AQ14507 147 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms