RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 GNPNAT1Q96EK6 184 aaPredicted RBP16.64■□□□□ 0.25
SSNA1-203ENST00000463511 FAM167A-AS1Q96KT0 104 aa16.64■□□□□ 0.25
SSNA1-203ENST00000463511 NDUFAF3Q9BU61 184 aa16.64■□□□□ 0.25
SSNA1-203ENST00000463511 C1QTNF4Q9BXJ3 329 aa16.64■□□□□ 0.25
SSNA1-203ENST00000463511 MRPL32Q9BYC8 188 aaKnown RBP16.64■□□□□ 0.25
SSNA1-203ENST00000463511 PRSS29PA6NIE9 313 aa16.63■□□□□ 0.25
SSNA1-203ENST00000463511 BCL2L11O43521 198 aa16.63■□□□□ 0.25
SSNA1-203ENST00000463511 M6PRP20645 277 aa16.63■□□□□ 0.25
SSNA1-203ENST00000463511 MEOX2P50222 304 aa16.63■□□□□ 0.25
SSNA1-203ENST00000463511 RAB2AP61019 212 aa16.63■□□□□ 0.25
SSNA1-203ENST00000463511 SNRPD3P62318 126 aaKnown RBP16.63■□□□□ 0.25
SSNA1-203ENST00000463511 SERF2P84101 59 aa16.63■□□□□ 0.25
SSNA1-203ENST00000463511 SLC25A2Q9BXI2 301 aa16.63■□□□□ 0.25
SSNA1-203ENST00000463511 FUT9Q9Y231 359 aa16.63■□□□□ 0.25
SSNA1-203ENST00000463511 KANTRA0A1W2PQU2 76 aa16.62■□□□□ 0.25
SSNA1-203ENST00000463511 RTL8CO15255 209 aa16.62■□□□□ 0.25
SSNA1-203ENST00000463511 IGLC2P0DOY2 106 aa16.62■□□□□ 0.25
SSNA1-203ENST00000463511 NUTF2P61970 127 aaKnown RBP16.62■□□□□ 0.25
SSNA1-203ENST00000463511 TMEM14CQ9P0S9 112 aa16.62■□□□□ 0.25
SSNA1-203ENST00000463511 DYNC1H1Q14204 4646 aaKnown RBP16.61■□□□□ 0.25
SSNA1-203ENST00000463511 H3BQ15 152 aa16.61■□□□□ 0.25
SSNA1-203ENST00000463511 SNRPCP09234 159 aaKnown RBP16.61■□□□□ 0.25
SSNA1-203ENST00000463511 MED14OSP0DP75 135 aa16.61■□□□□ 0.25
SSNA1-203ENST00000463511 RHOBP62745 196 aa16.61■□□□□ 0.25
SSNA1-203ENST00000463511 RYR1P21817 5038 aa16.61■□□□□ 0.25
SSNA1-203ENST00000463511 TRAV8-2A0A0B4J237 113 aa16.6■□□□□ 0.25
SSNA1-203ENST00000463511 H3BMM0 161 aa16.6■□□□□ 0.25
SSNA1-203ENST00000463511 ISLRO14498 428 aa16.6■□□□□ 0.25
SSNA1-203ENST00000463511 ID1P41134 155 aa16.6■□□□□ 0.25
SSNA1-203ENST00000463511 PSMB3P49720 205 aa16.6■□□□□ 0.25
SSNA1-203ENST00000463511 ZFP69Q49AA0 526 aa16.6■□□□□ 0.25
SSNA1-203ENST00000463511 OR10G4Q8NGN3 311 aa16.6■□□□□ 0.25
SSNA1-203ENST00000463511 OR10G9Q8NGN4 311 aa16.6■□□□□ 0.25
SSNA1-203ENST00000463511 OR10G7Q8NGN6 311 aa16.6■□□□□ 0.25
SSNA1-203ENST00000463511 C16orf92Q96LL3 132 aa16.6■□□□□ 0.25
SSNA1-203ENST00000463511 DNAH11Q96DT5 4516 aa16.59■□□□□ 0.25
SSNA1-203ENST00000463511 PFDN1O60925 122 aa16.59■□□□□ 0.25
SSNA1-203ENST00000463511 PYYP10082 97 aa16.59■□□□□ 0.25
SSNA1-203ENST00000463511 SAMD13Q5VXD3 122 aa16.59■□□□□ 0.25
SSNA1-203ENST00000463511 FAM122CQ6P4D5 195 aa16.59■□□□□ 0.25
SSNA1-203ENST00000463511 C20orf173Q96LM9 149 aa16.59■□□□□ 0.25
SSNA1-203ENST00000463511 LINC00052Q96N35 136 aa16.59■□□□□ 0.25
SSNA1-203ENST00000463511 ZNF471Q9BX82 626 aaPredicted RBP16.59■□□□□ 0.25
SSNA1-203ENST00000463511 ZNF586Q9NXT0 402 aa16.59■□□□□ 0.25
SSNA1-203ENST00000463511 H3BTX0 84 aa16.58■□□□□ 0.24
SSNA1-203ENST00000463511 EIF3GO75821 320 aaKnown RBP eCLIP16.58■□□□□ 0.24
SSNA1-203ENST00000463511 HLA-DRB4P13762 266 aa16.58■□□□□ 0.24
SSNA1-203ENST00000463511 IGFL4Q6B9Z1 124 aa16.58■□□□□ 0.24
SSNA1-203ENST00000463511 SAT2Q96F10 170 aaPredicted RBP16.58■□□□□ 0.24
SSNA1-203ENST00000463511 ZNF503Q96F45 646 aa16.58■□□□□ 0.24
SSNA1-203ENST00000463511 HLA-DRB4X5D2U9 266 aa16.58■□□□□ 0.24
SSNA1-203ENST00000463511 NACAE9PAV3 2078 aa16.58■□□□□ 0.24
SSNA1-203ENST00000463511 MBP02144 154 aa16.57■□□□□ 0.24
SSNA1-203ENST00000463511 HIST1H1EP10412 219 aaKnown RBP16.57■□□□□ 0.24
SSNA1-203ENST00000463511 EMP1P54849 157 aa16.57■□□□□ 0.24
SSNA1-203ENST00000463511 GDF5OSQ5U4N7 250 aa16.57■□□□□ 0.24
SSNA1-203ENST00000463511 ZNF705AQ6ZN79 300 aaPredicted RBP16.57■□□□□ 0.24
SSNA1-203ENST00000463511 C9orf62Q8N4C0 152 aa16.57■□□□□ 0.24
SSNA1-203ENST00000463511 OR51M1Q9H341 326 aa16.57■□□□□ 0.24
SSNA1-203ENST00000463511 RPRMQ9NS64 109 aa16.57■□□□□ 0.24
SSNA1-203ENST00000463511 A0A1W2PPV4 95 aa16.56■□□□□ 0.24
SSNA1-203ENST00000463511 FXYD7P58549 80 aa16.56■□□□□ 0.24
SSNA1-203ENST00000463511 DEFB1P60022 68 aa16.56■□□□□ 0.24
SSNA1-203ENST00000463511 GUK1Q16774 197 aa16.56■□□□□ 0.24
SSNA1-203ENST00000463511 LCN15Q6UWW0 184 aa16.56■□□□□ 0.24
SSNA1-203ENST00000463511 RNF182Q8N6D2 247 aa16.56■□□□□ 0.24
SSNA1-203ENST00000463511 PAXXQ9BUH6 204 aa16.56■□□□□ 0.24
SSNA1-203ENST00000463511 ZNF331Q9NQX6 463 aaPredicted RBP16.56■□□□□ 0.24
SSNA1-203ENST00000463511 PLA2G2EQ9NZK7 142 aa16.56■□□□□ 0.24
SSNA1-203ENST00000463511 IGHV3OR16-12A0A075B7B8 117 aa16.55■□□□□ 0.24
SSNA1-203ENST00000463511 SLC17A3O00476 420 aa16.55■□□□□ 0.24
SSNA1-203ENST00000463511 IGKV3-20P01619 116 aa16.55■□□□□ 0.24
SSNA1-203ENST00000463511 SPART-AS1P0CW21 52 aa16.55■□□□□ 0.24
SSNA1-203ENST00000463511 LGALS9BQ3B8N2 356 aa16.55■□□□□ 0.24
SSNA1-203ENST00000463511 LRRC20Q8TCA0 184 aa16.55■□□□□ 0.24
SSNA1-203ENST00000463511 FXYD5Q96DB9 178 aa16.55■□□□□ 0.24
SSNA1-203ENST00000463511 NEU1Q99519 415 aa16.55■□□□□ 0.24
SSNA1-203ENST00000463511 IGLV2-18A0A075B6J9 118 aa16.54■□□□□ 0.24
SSNA1-203ENST00000463511 TRBV19A0A075B6N1 114 aa16.54■□□□□ 0.24
SSNA1-203ENST00000463511 ZNF705FA8MVS1 300 aaPredicted RBP16.54■□□□□ 0.24
SSNA1-203ENST00000463511 OR7C2O60412 319 aa16.54■□□□□ 0.24
SSNA1-203ENST00000463511 SEC11BP0C7V7 166 aa16.54■□□□□ 0.24
SSNA1-203ENST00000463511 ZNF705DP0CH99 300 aaPredicted RBP16.54■□□□□ 0.24
SSNA1-203ENST00000463511 ZNF705BP0CI00 300 aaPredicted RBP16.54■□□□□ 0.24
SSNA1-203ENST00000463511 CDC34P49427 236 aaPredicted RBP16.54■□□□□ 0.24
SSNA1-203ENST00000463511 TAS2R45P59539 299 aa16.54■□□□□ 0.24
SSNA1-203ENST00000463511 EIF5AP63241 154 aaKnown RBP16.54■□□□□ 0.24
SSNA1-203ENST00000463511 KHDC3LQ587J8 217 aa16.54■□□□□ 0.24
SSNA1-203ENST00000463511 UBE2DNLQ8IWF7 75 aa16.54■□□□□ 0.24
SSNA1-203ENST00000463511 BAP18Q8IXM2 172 aa16.54■□□□□ 0.24
SSNA1-203ENST00000463511 RNF141Q8WVD5 230 aa16.54■□□□□ 0.24
SSNA1-203ENST00000463511 RAB24Q969Q5 203 aa16.54■□□□□ 0.24
SSNA1-203ENST00000463511 SLC50A1Q9BRV3 221 aa16.54■□□□□ 0.24
SSNA1-203ENST00000463511 HMGB3O15347 200 aaKnown RBP16.53■□□□□ 0.24
SSNA1-203ENST00000463511 NDUFB4O95168 129 aa16.53■□□□□ 0.24
SSNA1-203ENST00000463511 OR10J4P0C629 311 aa16.53■□□□□ 0.24
SSNA1-203ENST00000463511 NBEAP1P0C6P0 100 aa16.53■□□□□ 0.24
SSNA1-203ENST00000463511 STOML3Q8TAV4 291 aa16.53■□□□□ 0.24
SSNA1-203ENST00000463511 ACTR3CQ9C0K3 210 aaPredicted RBP16.53■□□□□ 0.24
SSNA1-203ENST00000463511 TMEM189A5PLL7 270 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms