RNA–Protein interactions for RNA: ENST00000463421.1

NFX1-204, Transcript of nuclear transcription factor, X-box binding 1, human

TSL 3

Gene NFX1, Length 987 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFX1-204	ENST00000463421		A0A096LPF7	62 aa		10.16	□□□□□ -0.78
NFX1-204	ENST00000463421	C9orf170	A2RU37	121 aa		10.16	□□□□□ -0.78
NFX1-204	ENST00000463421	COX7A2P2	O60397	106 aa		10.16	□□□□□ -0.78
NFX1-204	ENST00000463421	SCGB1D2	O95969	90 aa		10.16	□□□□□ -0.78
NFX1-204	ENST00000463421	DAZ2	Q13117	558 aa	Known RBP	10.16	□□□□□ -0.78
NFX1-204	ENST00000463421		Q6ZRN7	208 aa	Predicted RBP	10.16	□□□□□ -0.78
NFX1-204	ENST00000463421	VSIG2	Q96IQ7	327 aa		10.16	□□□□□ -0.78
NFX1-204	ENST00000463421	ODF3	Q96PU9	254 aa		10.16	□□□□□ -0.78
NFX1-204	ENST00000463421	TRGV2	A0A075B6R0	118 aa		10.15	□□□□□ -0.78
NFX1-204	ENST00000463421		H3BMQ9	156 aa		10.15	□□□□□ -0.78
NFX1-204	ENST00000463421	EREG	O14944	169 aa		10.15	□□□□□ -0.78
NFX1-204	ENST00000463421	AGPAT2	O15120	278 aa		10.15	□□□□□ -0.78
NFX1-204	ENST00000463421	SIVA1	O15304	175 aa		10.15	□□□□□ -0.78
NFX1-204	ENST00000463421	CT45A10	P0DMU9	189 aa		10.15	□□□□□ -0.78
NFX1-204	ENST00000463421	ERVFC1-1	P60608	527 aa		10.15	□□□□□ -0.78
NFX1-204	ENST00000463421	C10orf113	Q5VZT2	155 aa		10.15	□□□□□ -0.78
NFX1-204	ENST00000463421	PGPEP1	Q9NXJ5	209 aa		10.15	□□□□□ -0.78
NFX1-204	ENST00000463421		V9GYH0	126 aa		10.15	□□□□□ -0.78
NFX1-204	ENST00000463421	LINC00854	A0A1B0GVQ3	168 aa		10.14	□□□□□ -0.79
NFX1-204	ENST00000463421	NPIPB6	E9PJ23	425 aa		10.14	□□□□□ -0.79
NFX1-204	ENST00000463421	TSC22D2	O75157	780 aa		10.14	□□□□□ -0.79
NFX1-204	ENST00000463421	INAFM2	P0DMQ5	153 aa		10.14	□□□□□ -0.79
NFX1-204	ENST00000463421	IGLC2	P0DOY2	106 aa		10.14	□□□□□ -0.79
NFX1-204	ENST00000463421	OPCML	Q14982	345 aa		10.14	□□□□□ -0.79
NFX1-204	ENST00000463421	MORN5	Q5VZ52	161 aa		10.14	□□□□□ -0.79
NFX1-204	ENST00000463421	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	10.14	□□□□□ -0.79
NFX1-204	ENST00000463421	ZNF680	Q8NEM1	530 aa		10.14	□□□□□ -0.79
NFX1-204	ENST00000463421	ZNF431	Q8TF32	576 aa	Predicted RBP	10.14	□□□□□ -0.79
NFX1-204	ENST00000463421	TMEM37	Q8WXS4	190 aa		10.14	□□□□□ -0.79
NFX1-204	ENST00000463421		H3BQ15	152 aa		10.13	□□□□□ -0.79
NFX1-204	ENST00000463421	FUS	P35637	526 aa	Known RBP eCLIP	10.13	□□□□□ -0.79
NFX1-204	ENST00000463421	TAS2R30	P59541	319 aa		10.13	□□□□□ -0.79
NFX1-204	ENST00000463421	GUK1	Q16774	197 aa		10.13	□□□□□ -0.79
NFX1-204	ENST00000463421	C4orf46	Q504U0	113 aa		10.13	□□□□□ -0.79
NFX1-204	ENST00000463421	CDPF1	Q6NVV7	123 aa		10.13	□□□□□ -0.79
NFX1-204	ENST00000463421	LYPD1	Q8N2G4	141 aa		10.13	□□□□□ -0.79
NFX1-204	ENST00000463421	SAT2	Q96F10	170 aa	Predicted RBP	10.13	□□□□□ -0.79
NFX1-204	ENST00000463421	C18orf15	Q96N68	181 aa		10.13	□□□□□ -0.79
NFX1-204	ENST00000463421	MGST2	Q99735	147 aa		10.13	□□□□□ -0.79
NFX1-204	ENST00000463421	GGACT	Q9BVM4	153 aa		10.13	□□□□□ -0.79
NFX1-204	ENST00000463421	GSN-AS1	Q9NRJ2	163 aa		10.13	□□□□□ -0.79
NFX1-204	ENST00000463421	TRGV1	A0A0A0MS02	117 aa		10.12	□□□□□ -0.79
NFX1-204	ENST00000463421	NXPH4	O95158	308 aa		10.12	□□□□□ -0.79
NFX1-204	ENST00000463421	SLC25A5	P05141	298 aa	Known RBP	10.12	□□□□□ -0.79
NFX1-204	ENST00000463421	ARL16	Q0P5N6	197 aa		10.12	□□□□□ -0.79
NFX1-204	ENST00000463421	IAH1	Q2TAA2	248 aa	Predicted RBP	10.12	□□□□□ -0.79
NFX1-204	ENST00000463421	C11orf72	Q8NBR9	251 aa		10.12	□□□□□ -0.79
NFX1-204	ENST00000463421	FUT9	Q9Y231	359 aa		10.12	□□□□□ -0.79
NFX1-204	ENST00000463421	RCL1	Q9Y2P8	373 aa	Known RBP	10.12	□□□□□ -0.79
NFX1-204	ENST00000463421	ICOS	Q9Y6W8	199 aa		10.12	□□□□□ -0.79
NFX1-204	ENST00000463421	C7orf71	A4D174	169 aa		10.11	□□□□□ -0.79
NFX1-204	ENST00000463421	NDUFB6	O95139	128 aa		10.11	□□□□□ -0.79
NFX1-204	ENST00000463421	OR4E1	P0C645	316 aa		10.11	□□□□□ -0.79
NFX1-204	ENST00000463421	S100A5	P33763	92 aa		10.11	□□□□□ -0.79
NFX1-204	ENST00000463421	FRZB	Q92765	325 aa		10.11	□□□□□ -0.79
NFX1-204	ENST00000463421	DNAJC4	Q9NNZ3	241 aa		10.11	□□□□□ -0.79
NFX1-204	ENST00000463421	GSKIP	Q9P0R6	139 aa		10.11	□□□□□ -0.79
NFX1-204	ENST00000463421	VPS13B	Q7Z7G8	4022 aa		10.11	□□□□□ -0.79
NFX1-204	ENST00000463421	DMBT1	Q9UGM3	2413 aa	Predicted RBP	10.11	□□□□□ -0.79
NFX1-204	ENST00000463421	PAX4	O43316	350 aa		10.1	□□□□□ -0.79
NFX1-204	ENST00000463421	CAMLG	P49069	296 aa		10.1	□□□□□ -0.79
NFX1-204	ENST00000463421	INPP1	P49441	399 aa		10.1	□□□□□ -0.79
NFX1-204	ENST00000463421	XG	P55808	180 aa		10.1	□□□□□ -0.79
NFX1-204	ENST00000463421	RAB31	Q13636	194 aa		10.1	□□□□□ -0.79
NFX1-204	ENST00000463421		Q5VSD8	79 aa		10.1	□□□□□ -0.79
NFX1-204	ENST00000463421		Q6ZRG5	221 aa		10.1	□□□□□ -0.79
NFX1-204	ENST00000463421	NFE4	Q86UQ8	179 aa		10.1	□□□□□ -0.79
NFX1-204	ENST00000463421	EIF4E3	Q8N5X7	224 aa	Known RBP	10.1	□□□□□ -0.79
NFX1-204	ENST00000463421	FLVCR2	Q9UPI3	526 aa		10.1	□□□□□ -0.79
NFX1-204	ENST00000463421	FAT1	Q14517	4588 aa		10.1	□□□□□ -0.79
NFX1-204	ENST00000463421	TRAV5	A0A0B4J249	113 aa		10.09	□□□□□ -0.79
NFX1-204	ENST00000463421	C7orf66	A4D0T2	115 aa		10.09	□□□□□ -0.79
NFX1-204	ENST00000463421	NAP1L6	A6NFF2	107 aa		10.09	□□□□□ -0.79
NFX1-204	ENST00000463421	SPINK4	O60575	86 aa		10.09	□□□□□ -0.79
NFX1-204	ENST00000463421	ZNF253	O75346	499 aa		10.09	□□□□□ -0.79
NFX1-204	ENST00000463421	ZNF324	O75467	553 aa	Predicted RBP	10.09	□□□□□ -0.79
NFX1-204	ENST00000463421	IFNA5	P01569	189 aa		10.09	□□□□□ -0.79
NFX1-204	ENST00000463421	BTN1A1	Q13410	526 aa		10.09	□□□□□ -0.79
NFX1-204	ENST00000463421	OR1L4	Q8NGR5	311 aa		10.09	□□□□□ -0.79
NFX1-204	ENST00000463421	MRPL53	Q96EL3	112 aa	Known RBP	10.09	□□□□□ -0.79
NFX1-204	ENST00000463421	PFDN5	Q99471	154 aa		10.09	□□□□□ -0.79
NFX1-204	ENST00000463421	LINC00467	Q9BRT7	94 aa		10.09	□□□□□ -0.79
NFX1-204	ENST00000463421	KLF12	Q9Y4X4	402 aa		10.09	□□□□□ -0.79
NFX1-204	ENST00000463421	TNFRSF18	Q9Y5U5	241 aa		10.09	□□□□□ -0.79
NFX1-204	ENST00000463421	KLLN	B2CW77	178 aa		10.08	□□□□□ -0.8
NFX1-204	ENST00000463421		L7N2F9	121 aa		10.08	□□□□□ -0.8
NFX1-204	ENST00000463421		M0R3E3	92 aa		10.08	□□□□□ -0.8
NFX1-204	ENST00000463421	DNAH10OS	P0CZ25	163 aa		10.08	□□□□□ -0.8
NFX1-204	ENST00000463421	TCL1A	P56279	114 aa		10.08	□□□□□ -0.8
NFX1-204	ENST00000463421	VAMP2	P63027	116 aa		10.08	□□□□□ -0.8
NFX1-204	ENST00000463421	CD300C	Q08708	224 aa		10.08	□□□□□ -0.8
NFX1-204	ENST00000463421	ERCC8	Q13216	396 aa		10.08	□□□□□ -0.8
NFX1-204	ENST00000463421	ANXA2R	Q3ZCQ2	193 aa		10.08	□□□□□ -0.8
NFX1-204	ENST00000463421	MIC13	Q5XKP0	118 aa		10.08	□□□□□ -0.8
NFX1-204	ENST00000463421	NRARP	Q7Z6K4	114 aa		10.08	□□□□□ -0.8
NFX1-204	ENST00000463421	ST6GAL2	Q96JF0	529 aa		10.08	□□□□□ -0.8
NFX1-204	ENST00000463421		A0A087WTM6	91 aa		10.07	□□□□□ -0.8
NFX1-204	ENST00000463421	MPDU1	O75352	247 aa		10.07	□□□□□ -0.8
NFX1-204	ENST00000463421	IGHV3-53	P01767	116 aa		10.07	□□□□□ -0.8
NFX1-204	ENST00000463421	MBP	P02686	304 aa	Predicted RBP	10.07	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms