RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 CHEK1O14757 476 aa9.84□□□□□ -0.83
VAPB-203ENST00000463370 NUPR1O60356 82 aa9.84□□□□□ -0.83
VAPB-203ENST00000463370 P01737 135 aa9.84□□□□□ -0.83
VAPB-203ENST00000463370 GZMBP10144 247 aa9.84□□□□□ -0.83
VAPB-203ENST00000463370 PSG9Q00887 426 aa9.84□□□□□ -0.83
VAPB-203ENST00000463370 GNB1LQ9BYB4 327 aa9.84□□□□□ -0.83
VAPB-203ENST00000463370 ZNF492Q9P255 531 aa9.84□□□□□ -0.83
VAPB-203ENST00000463370 PRRC2AP48634 2157 aaKnown RBP9.84□□□□□ -0.83
VAPB-203ENST00000463370 PCP4L1A6NKN8 68 aa9.83□□□□□ -0.84
VAPB-203ENST00000463370 PRAC2D3DTV9 90 aa9.83□□□□□ -0.84
VAPB-203ENST00000463370 RPL19P84098 196 aaKnown RBP9.83□□□□□ -0.84
VAPB-203ENST00000463370 KIAA1644Q3SXP7 199 aa9.83□□□□□ -0.84
VAPB-203ENST00000463370 CDPF1Q6NVV7 123 aa9.83□□□□□ -0.84
VAPB-203ENST00000463370 TMEM256Q8N2U0 113 aa9.83□□□□□ -0.84
VAPB-203ENST00000463370 METTL26Q96S19 204 aa9.83□□□□□ -0.84
VAPB-203ENST00000463370 VGLL1Q99990 258 aa9.83□□□□□ -0.84
VAPB-203ENST00000463370 NAT8BQ9UHF3 227 aa9.83□□□□□ -0.84
VAPB-203ENST00000463370 TP53TG3Q9ULZ0 132 aa9.83□□□□□ -0.84
VAPB-203ENST00000463370 U3KQE9 123 aa9.83□□□□□ -0.84
VAPB-203ENST00000463370 TLN2Q9Y4G6 2542 aa9.83□□□□□ -0.84
VAPB-203ENST00000463370 J3QKU1 62 aa9.83□□□□□ -0.84
VAPB-203ENST00000463370 SMIM6P0DI80 62 aa9.83□□□□□ -0.84
VAPB-203ENST00000463370 RAB9AP51151 201 aa9.83□□□□□ -0.84
VAPB-203ENST00000463370 RAB4BP61018 213 aa9.83□□□□□ -0.84
VAPB-203ENST00000463370 PYY3Q5JQD4 70 aa9.83□□□□□ -0.84
VAPB-203ENST00000463370 OR4X2Q8NGF9 303 aa9.83□□□□□ -0.84
VAPB-203ENST00000463370 Q8TAT8 98 aa9.83□□□□□ -0.84
VAPB-203ENST00000463370 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.82□□□□□ -0.84
VAPB-203ENST00000463370 NPIPB6E9PJ23 425 aa9.82□□□□□ -0.84
VAPB-203ENST00000463370 F2Z2F3 143 aa9.82□□□□□ -0.84
VAPB-203ENST00000463370 H3BUA1 57 aa9.82□□□□□ -0.84
VAPB-203ENST00000463370 SMAD7O15105 426 aaKnown RBP9.82□□□□□ -0.84
VAPB-203ENST00000463370 BRI3O95415 125 aa9.82□□□□□ -0.84
VAPB-203ENST00000463370 AMBPP02760 352 aa9.82□□□□□ -0.84
VAPB-203ENST00000463370 S100A2P29034 98 aa9.82□□□□□ -0.84
VAPB-203ENST00000463370 GBGT1Q8N5D6 347 aa9.82□□□□□ -0.84
VAPB-203ENST00000463370 ITPR2Q14571 2701 aa9.82□□□□□ -0.84
VAPB-203ENST00000463370 A0A087X0K7 114 aa9.82□□□□□ -0.84
VAPB-203ENST00000463370 K7EQM0 130 aa9.82□□□□□ -0.84
VAPB-203ENST00000463370 HOXA3O43365 443 aaPredicted RBP9.82□□□□□ -0.84
VAPB-203ENST00000463370 CSN1S1P47710 185 aa9.82□□□□□ -0.84
VAPB-203ENST00000463370 Q6YL49 198 aa9.82□□□□□ -0.84
VAPB-203ENST00000463370 IL17RELQ6ZVW7 336 aa9.82□□□□□ -0.84
VAPB-203ENST00000463370 OR5R1Q8NH85 324 aa9.82□□□□□ -0.84
VAPB-203ENST00000463370 DAZAP1Q96EP5 407 aaKnown RBP9.82□□□□□ -0.84
VAPB-203ENST00000463370 USMG5Q96IX5 58 aa9.82□□□□□ -0.84
VAPB-203ENST00000463370 DUX5Q96PT3 197 aa9.82□□□□□ -0.84
VAPB-203ENST00000463370 ATP6V0BQ99437 205 aa9.82□□□□□ -0.84
VAPB-203ENST00000463370 ZFP30Q9Y2G7 519 aa9.82□□□□□ -0.84
VAPB-203ENST00000463370 TRAV8-2A0A0B4J237 113 aa9.81□□□□□ -0.84
VAPB-203ENST00000463370 LINC00310P59036 64 aa9.81□□□□□ -0.84
VAPB-203ENST00000463370 SLAQ13239 276 aa9.81□□□□□ -0.84
VAPB-203ENST00000463370 LCN12Q6JVE5 192 aa9.81□□□□□ -0.84
VAPB-203ENST00000463370 C16orf54Q6UWD8 224 aa9.81□□□□□ -0.84
VAPB-203ENST00000463370 C9orf139Q6ZV77 190 aa9.81□□□□□ -0.84
VAPB-203ENST00000463370 PACRGQ96M98 296 aaPredicted RBP9.81□□□□□ -0.84
VAPB-203ENST00000463370 VPREB3Q9UKI3 123 aa9.81□□□□□ -0.84
VAPB-203ENST00000463370 SELENOKQ9Y6D0 94 aa9.81□□□□□ -0.84
VAPB-203ENST00000463370 ZNF253O75346 499 aa9.81□□□□□ -0.84
VAPB-203ENST00000463370 ERCC8Q13216 396 aa9.81□□□□□ -0.84
VAPB-203ENST00000463370 OR2D3Q8NGH3 330 aa9.81□□□□□ -0.84
VAPB-203ENST00000463370 PGLYRP4Q96LB8 373 aa9.81□□□□□ -0.84
VAPB-203ENST00000463370 SSBP4Q9BWG4 385 aaPredicted RBP9.81□□□□□ -0.84
VAPB-203ENST00000463370 UNC79Q9P2D8 2635 aa9.8□□□□□ -0.84
VAPB-203ENST00000463370 EDN2P20800 178 aa9.8□□□□□ -0.84
VAPB-203ENST00000463370 PSMB8P28062 276 aa9.8□□□□□ -0.84
VAPB-203ENST00000463370 CAMPP49913 170 aa9.8□□□□□ -0.84
VAPB-203ENST00000463370 CT83Q5H943 113 aa9.8□□□□□ -0.84
VAPB-203ENST00000463370 C1orf194Q5T5A4 169 aa9.8□□□□□ -0.84
VAPB-203ENST00000463370 CYB5R2Q6BCY4 276 aa9.8□□□□□ -0.84
VAPB-203ENST00000463370 PRSS57Q6UWY2 283 aa9.8□□□□□ -0.84
VAPB-203ENST00000463370 FLNAP21333 2647 aaKnown RBP9.8□□□□□ -0.84
VAPB-203ENST00000463370 GCN1Q92616 2671 aaKnown RBP9.8□□□□□ -0.84
VAPB-203ENST00000463370 A8MWL6 223 aa9.8□□□□□ -0.84
VAPB-203ENST00000463370 WDR73Q6P4I2 378 aa9.8□□□□□ -0.84
VAPB-203ENST00000463370 C8orf86Q6ZUL3 223 aa9.8□□□□□ -0.84
VAPB-203ENST00000463370 TMEM190Q8WZ59 177 aa9.8□□□□□ -0.84
VAPB-203ENST00000463370 NIT2Q9NQR4 276 aa9.8□□□□□ -0.84
VAPB-203ENST00000463370 A0A1B0GXF2 115 aa9.79□□□□□ -0.84
VAPB-203ENST00000463370 NDUFA4O00483 81 aa9.79□□□□□ -0.84
VAPB-203ENST00000463370 CRISP2P16562 243 aa9.79□□□□□ -0.84
VAPB-203ENST00000463370 S100A7P31151 101 aa9.79□□□□□ -0.84
VAPB-203ENST00000463370 GLMPQ8WWB7 406 aa9.79□□□□□ -0.84
VAPB-203ENST00000463370 PRR25Q96S07 402 aa9.79□□□□□ -0.84
VAPB-203ENST00000463370 MT-ND6P03923 174 aa9.79□□□□□ -0.84
VAPB-203ENST00000463370 ZNF80P51504 273 aaPredicted RBP9.79□□□□□ -0.84
VAPB-203ENST00000463370 WIPF2Q8TF74 440 aaPredicted RBP9.79□□□□□ -0.84
VAPB-203ENST00000463370 ZNF702PQ9H963 129 aa9.79□□□□□ -0.84
VAPB-203ENST00000463370 ANK3Q12955 4377 aaKnown RBP9.78□□□□□ -0.84
VAPB-203ENST00000463370 HLA-DQA1P01909 254 aa9.78□□□□□ -0.84
VAPB-203ENST00000463370 TM4SF20Q53R12 229 aa9.78□□□□□ -0.84
VAPB-203ENST00000463370 GPHB5Q86YW7 130 aa9.78□□□□□ -0.84
VAPB-203ENST00000463370 SONP18583 2426 aaKnown RBP9.78□□□□□ -0.84
VAPB-203ENST00000463370 A0A0G2JLM5 398 aa9.78□□□□□ -0.84
VAPB-203ENST00000463370 SERTM2A0A1B0GWG4 89 aa9.78□□□□□ -0.84
VAPB-203ENST00000463370 APCSP02743 223 aa9.78□□□□□ -0.84
VAPB-203ENST00000463370 RPLP1P05386 114 aaKnown RBP9.78□□□□□ -0.84
VAPB-203ENST00000463370 SRIP30626 198 aa9.78□□□□□ -0.84
VAPB-203ENST00000463370 ZNF580Q9UK33 172 aa9.78□□□□□ -0.84
VAPB-203ENST00000463370 TMSB15BA0A087X1C1 80 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms