RNA–Protein interactions for RNA: ENST00000462254.1

CSMD3-205, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-205ENST00000462254 EIF3GO75821 320 aaKnown RBP eCLIP3.5□□□□□ -1.85
CSMD3-205ENST00000462254 IGHV3-48P01763 117 aa3.5□□□□□ -1.85
CSMD3-205ENST00000462254 IFNA4P05014 189 aa3.5□□□□□ -1.85
CSMD3-205ENST00000462254 MDKP21741 143 aaPredicted RBP3.5□□□□□ -1.85
CSMD3-205ENST00000462254 RPL29P47914 159 aaKnown RBP3.5□□□□□ -1.85
CSMD3-205ENST00000462254 BAXQ07812 192 aa3.5□□□□□ -1.85
CSMD3-205ENST00000462254 CLINT1Q14677 625 aa3.5□□□□□ -1.85
CSMD3-205ENST00000462254 KLK9Q2XQG4 91 aa3.5□□□□□ -1.85
CSMD3-205ENST00000462254 NSUN5P1Q3KNT7 163 aa3.5□□□□□ -1.85
CSMD3-205ENST00000462254 RPL7L1Q6DKI1 246 aaKnown RBP3.5□□□□□ -1.85
CSMD3-205ENST00000462254 Q6ZRP5 223 aa3.5□□□□□ -1.85
CSMD3-205ENST00000462254 STX12Q86Y82 276 aa3.5□□□□□ -1.85
CSMD3-205ENST00000462254 OR10P1Q8NGE3 313 aa3.5□□□□□ -1.85
CSMD3-205ENST00000462254 OR1P1Q8NH06 330 aa3.5□□□□□ -1.85
CSMD3-205ENST00000462254 RASL10AQ92737 203 aa3.5□□□□□ -1.85
CSMD3-205ENST00000462254 OR5B12Q96R08 314 aa3.5□□□□□ -1.85
CSMD3-205ENST00000462254 ZNF580Q9UK33 172 aa3.5□□□□□ -1.85
CSMD3-205ENST00000462254 KLK9Q9UKQ9 250 aa3.5□□□□□ -1.85
CSMD3-205ENST00000462254 RFNGQ9Y644 331 aa3.5□□□□□ -1.85
CSMD3-205ENST00000462254 S4R3C0 116 aa3.5□□□□□ -1.85
CSMD3-205ENST00000462254 IGKV1D-37A0A075B6S9 117 aa3.49□□□□□ -1.85
CSMD3-205ENST00000462254 UBE2L5PA0A1B0GUS4 154 aa3.49□□□□□ -1.85
CSMD3-205ENST00000462254 TEX48A0A1B0GUV7 120 aa3.49□□□□□ -1.85
CSMD3-205ENST00000462254 KANTRA0A1W2PQU2 76 aa3.49□□□□□ -1.85
CSMD3-205ENST00000462254 SMKR1H3BMG3 65 aa3.49□□□□□ -1.85
CSMD3-205ENST00000462254 CORTO00230 105 aa3.49□□□□□ -1.85
CSMD3-205ENST00000462254 TCF21O43680 179 aa3.49□□□□□ -1.85
CSMD3-205ENST00000462254 MT-CO2P00403 227 aa3.49□□□□□ -1.85
CSMD3-205ENST00000462254 CFDP00746 253 aaPredicted RBP3.49□□□□□ -1.85
CSMD3-205ENST00000462254 RBMY1CP0DJD4 496 aa3.49□□□□□ -1.85
CSMD3-205ENST00000462254 DEFA4P12838 97 aa3.49□□□□□ -1.85
CSMD3-205ENST00000462254 RAB4AP20338 218 aa3.49□□□□□ -1.85
CSMD3-205ENST00000462254 OPRK1P41145 380 aa3.49□□□□□ -1.85
CSMD3-205ENST00000462254 RND2P52198 227 aa3.49□□□□□ -1.85
CSMD3-205ENST00000462254 SUB1P53999 127 aaKnown RBP eCLIP3.49□□□□□ -1.85
CSMD3-205ENST00000462254 HBG1P69891 147 aa3.49□□□□□ -1.85
CSMD3-205ENST00000462254 HBG2P69892 147 aa3.49□□□□□ -1.85
CSMD3-205ENST00000462254 RUNX1Q01196 453 aa3.49□□□□□ -1.85
CSMD3-205ENST00000462254 IFITM2Q01629 132 aa3.49□□□□□ -1.85
CSMD3-205ENST00000462254 FFAR4Q5NUL3 377 aa3.49□□□□□ -1.85
CSMD3-205ENST00000462254 SLC16A13Q7RTY0 426 aa3.49□□□□□ -1.85
CSMD3-205ENST00000462254 ZNF329Q86UD4 541 aa3.49□□□□□ -1.85
CSMD3-205ENST00000462254 RNASEH2CQ8TDP1 164 aaKnown RBP3.49□□□□□ -1.85
CSMD3-205ENST00000462254 ZNF414Q96IQ9 312 aa3.49□□□□□ -1.85
CSMD3-205ENST00000462254 RARRES2Q99969 163 aa3.49□□□□□ -1.85
CSMD3-205ENST00000462254 TMEM147Q9BVK8 224 aa3.49□□□□□ -1.85
CSMD3-205ENST00000462254 ZNF471Q9BX82 626 aaPredicted RBP3.49□□□□□ -1.85
CSMD3-205ENST00000462254 WDR61Q9GZS3 305 aaKnown RBP3.49□□□□□ -1.85
CSMD3-205ENST00000462254 PARLQ9H300 379 aa3.49□□□□□ -1.85
CSMD3-205ENST00000462254 C16orf95Q9H693 158 aa3.49□□□□□ -1.85
CSMD3-205ENST00000462254 UQCC1Q9NVA1 299 aa3.49□□□□□ -1.85
CSMD3-205ENST00000462254 Q9UF83 564 aa3.49□□□□□ -1.85
CSMD3-205ENST00000462254 A6NDN8 102 aa3.48□□□□□ -1.85
CSMD3-205ENST00000462254 FNDC10F2Z333 226 aa3.48□□□□□ -1.85
CSMD3-205ENST00000462254 H3BUA1 57 aa3.48□□□□□ -1.85
CSMD3-205ENST00000462254 TAAR5O14804 337 aa3.48□□□□□ -1.85
CSMD3-205ENST00000462254 IGHV3-23P01764 117 aa3.48□□□□□ -1.85
CSMD3-205ENST00000462254 TRGV3P03979 118 aa3.48□□□□□ -1.85
CSMD3-205ENST00000462254 CRYBA1P05813 215 aa3.48□□□□□ -1.85
CSMD3-205ENST00000462254 TPT1P13693 172 aaKnown RBP3.48□□□□□ -1.85
CSMD3-205ENST00000462254 HIST1H1BP16401 226 aaKnown RBP3.48□□□□□ -1.85
CSMD3-205ENST00000462254 FGF7P21781 194 aa3.48□□□□□ -1.85
CSMD3-205ENST00000462254 ATP6V0CP27449 155 aa3.48□□□□□ -1.85
CSMD3-205ENST00000462254 PSMB8P28062 276 aa3.48□□□□□ -1.85
CSMD3-205ENST00000462254 TPPP2P59282 170 aa3.48□□□□□ -1.85
CSMD3-205ENST00000462254 RHOGP84095 191 aa3.48□□□□□ -1.85
CSMD3-205ENST00000462254 AKR1C1Q04828 323 aa3.48□□□□□ -1.85
CSMD3-205ENST00000462254 ZNF266Q14584 549 aa3.48□□□□□ -1.85
CSMD3-205ENST00000462254 ZNF726P1Q15940 193 aa3.48□□□□□ -1.85
CSMD3-205ENST00000462254 UFSP1Q6NVU6 142 aa3.48□□□□□ -1.85
CSMD3-205ENST00000462254 ALKAL2Q6UX46 152 aa3.48□□□□□ -1.85
CSMD3-205ENST00000462254 TMEM144Q7Z5S9 345 aa3.48□□□□□ -1.85
CSMD3-205ENST00000462254 SLC51BQ86UW2 128 aa3.48□□□□□ -1.85
CSMD3-205ENST00000462254 BAP18Q8IXM2 172 aa3.48□□□□□ -1.85
CSMD3-205ENST00000462254 UBAC2Q8NBM4 344 aa3.48□□□□□ -1.85
CSMD3-205ENST00000462254 HSD17B11Q8NBQ5 300 aa3.48□□□□□ -1.85
CSMD3-205ENST00000462254 LINC01006Q8NI28 216 aa3.48□□□□□ -1.85
CSMD3-205ENST00000462254 STOML3Q8TAV4 291 aa3.48□□□□□ -1.85
CSMD3-205ENST00000462254 MYOZ3Q8TDC0 251 aa3.48□□□□□ -1.85
CSMD3-205ENST00000462254 EEF1AKMT3Q96AZ1 226 aa3.48□□□□□ -1.85
CSMD3-205ENST00000462254 ACY3Q96HD9 319 aa3.48□□□□□ -1.85
CSMD3-205ENST00000462254 SLC35E1Q96K37 410 aa3.48□□□□□ -1.85
CSMD3-205ENST00000462254 MGST2Q99735 147 aa3.48□□□□□ -1.85
CSMD3-205ENST00000462254 GINS3Q9BRX5 216 aa3.48□□□□□ -1.85
CSMD3-205ENST00000462254 GGACTQ9BVM4 153 aa3.48□□□□□ -1.85
CSMD3-205ENST00000462254 GGTLC1Q9BX51 225 aa3.48□□□□□ -1.85
CSMD3-205ENST00000462254 C1QTNF4Q9BXJ3 329 aa3.48□□□□□ -1.85
CSMD3-205ENST00000462254 NPCDR1Q9BY65 106 aa3.48□□□□□ -1.85
CSMD3-205ENST00000462254 SH3BGRL3Q9H299 93 aa3.48□□□□□ -1.85
CSMD3-205ENST00000462254 ARV1Q9H2C2 271 aa3.48□□□□□ -1.85
CSMD3-205ENST00000462254 NPVFQ9HCQ7 196 aa3.48□□□□□ -1.85
CSMD3-205ENST00000462254 ZNF355PQ9NSJ1 428 aa3.48□□□□□ -1.85
CSMD3-205ENST00000462254 WNK1Q9H4A3 2382 aa3.48□□□□□ -1.85
CSMD3-205ENST00000462254 TEP1Q99973 2627 aaKnown RBP3.48□□□□□ -1.85
CSMD3-205ENST00000462254 C2CD3Q4AC94 2353 aa3.47□□□□□ -1.85
CSMD3-205ENST00000462254 BORCS7-ASMTA0A0B4J1R7 106 aa3.47□□□□□ -1.85
CSMD3-205ENST00000462254 FAM223BA6NKX1 122 aa3.47□□□□□ -1.85
CSMD3-205ENST00000462254 K7EMT4 169 aa3.47□□□□□ -1.85
CSMD3-205ENST00000462254 AGPAT2O15120 278 aa3.47□□□□□ -1.85
CSMD3-205ENST00000462254 GCGP01275 180 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms