RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 ZNF575Q86XF7 245 aa12.46□□□□□ -0.41
SSB-206ENST00000461708 OR1L4Q8NGR5 311 aa12.46□□□□□ -0.41
SSB-206ENST00000461708 CHAC2Q8WUX2 184 aa12.46□□□□□ -0.41
SSB-206ENST00000461708 PFDN5Q99471 154 aa12.46□□□□□ -0.41
SSB-206ENST00000461708 C11orf1Q9H5F2 150 aa12.46□□□□□ -0.41
SSB-206ENST00000461708 UQCC1Q9NVA1 299 aa12.46□□□□□ -0.41
SSB-206ENST00000461708 WDR83OSQ9Y284 106 aa12.46□□□□□ -0.41
SSB-206ENST00000461708 NPIPB6E9PJ23 425 aa12.45□□□□□ -0.42
SSB-206ENST00000461708 H3BNG1 76 aa12.45□□□□□ -0.42
SSB-206ENST00000461708 M6PRP20645 277 aa12.45□□□□□ -0.42
SSB-206ENST00000461708 LEPP41159 167 aa12.45□□□□□ -0.42
SSB-206ENST00000461708 TNP2Q05952 138 aa12.45□□□□□ -0.42
SSB-206ENST00000461708 CLINT1Q14677 625 aa12.45□□□□□ -0.42
SSB-206ENST00000461708 KIR3DS1Q14943 382 aa12.45□□□□□ -0.42
SSB-206ENST00000461708 NRARPQ7Z6K4 114 aa12.45□□□□□ -0.42
SSB-206ENST00000461708 ZNF431Q8TF32 576 aaPredicted RBP12.45□□□□□ -0.42
SSB-206ENST00000461708 MRPL53Q96EL3 112 aaKnown RBP12.45□□□□□ -0.42
SSB-206ENST00000461708 CCSO14618 274 aa12.44□□□□□ -0.42
SSB-206ENST00000461708 LYRM1O43325 122 aa12.44□□□□□ -0.42
SSB-206ENST00000461708 CST7O76096 145 aa12.44□□□□□ -0.42
SSB-206ENST00000461708 TCRBP04435 133 aa12.44□□□□□ -0.42
SSB-206ENST00000461708 SNRPCP09234 159 aaKnown RBP12.44□□□□□ -0.42
SSB-206ENST00000461708 PVALBP20472 110 aaPredicted RBP12.44□□□□□ -0.42
SSB-206ENST00000461708 RPL29P47914 159 aaKnown RBP12.44□□□□□ -0.42
SSB-206ENST00000461708 BCAP31P51572 246 aa12.44□□□□□ -0.42
SSB-206ENST00000461708 CAV2P51636 162 aa12.44□□□□□ -0.42
SSB-206ENST00000461708 DAZ2Q13117 558 aaKnown RBP12.44□□□□□ -0.42
SSB-206ENST00000461708 SSX7Q7RTT5 188 aa12.44□□□□□ -0.42
SSB-206ENST00000461708 C12orf45Q8N5I9 185 aaPredicted RBP12.44□□□□□ -0.42
SSB-206ENST00000461708 RXFP4Q8TDU9 374 aa12.44□□□□□ -0.42
SSB-206ENST00000461708 GNPNAT1Q96EK6 184 aaPredicted RBP12.44□□□□□ -0.42
SSB-206ENST00000461708 PYGO2Q9BRQ0 406 aa12.44□□□□□ -0.42
SSB-206ENST00000461708 TRAV26-1A0A087WT03 109 aa12.43□□□□□ -0.42
SSB-206ENST00000461708 RLN2P04090 185 aa12.43□□□□□ -0.42
SSB-206ENST00000461708 CT45A10P0DMU9 189 aa12.43□□□□□ -0.42
SSB-206ENST00000461708 PRB4P10163 310 aaPredicted RBP12.43□□□□□ -0.42
SSB-206ENST00000461708 S100A11P31949 105 aa12.43□□□□□ -0.42
SSB-206ENST00000461708 MIC13Q5XKP0 118 aa12.43□□□□□ -0.42
SSB-206ENST00000461708 C2orf50Q96LR7 162 aa12.43□□□□□ -0.42
SSB-206ENST00000461708 PARD6GQ9BYG4 376 aaPredicted RBP12.43□□□□□ -0.42
SSB-206ENST00000461708 LSM5Q9Y4Y9 91 aaKnown RBP12.43□□□□□ -0.42
SSB-206ENST00000461708 FAM25EA8MYX2 175 aa12.42□□□□□ -0.42
SSB-206ENST00000461708 SNURFLB1AK76 121 aa12.42□□□□□ -0.42
SSB-206ENST00000461708 H3BTX0 84 aa12.42□□□□□ -0.42
SSB-206ENST00000461708 CDK2AP2O75956 126 aa12.42□□□□□ -0.42
SSB-206ENST00000461708 SULT1A1P50225 295 aa12.42□□□□□ -0.42
SSB-206ENST00000461708 IL15RAQ13261 267 aa12.42□□□□□ -0.42
SSB-206ENST00000461708 OR5I1Q13606 314 aa12.42□□□□□ -0.42
SSB-206ENST00000461708 TTC32Q5I0X7 151 aa12.42□□□□□ -0.42
SSB-206ENST00000461708 UPK3BQ9BT76 320 aa12.42□□□□□ -0.42
SSB-206ENST00000461708 Q9H8V8 135 aa12.42□□□□□ -0.42
SSB-206ENST00000461708 LYRM2Q9NU23 88 aaPredicted RBP12.42□□□□□ -0.42
SSB-206ENST00000461708 SLC39A9Q9NUM3 307 aa12.42□□□□□ -0.42
SSB-206ENST00000461708 ZNF586Q9NXT0 402 aa12.42□□□□□ -0.42
SSB-206ENST00000461708 TMEM14CQ9P0S9 112 aa12.42□□□□□ -0.42
SSB-206ENST00000461708 TRAV5A0A0B4J249 113 aa12.41□□□□□ -0.42
SSB-206ENST00000461708 C5orf51A6NDU8 294 aa12.41□□□□□ -0.42
SSB-206ENST00000461708 C16orf90A8MZG2 172 aa12.41□□□□□ -0.42
SSB-206ENST00000461708 SLC25A5P05141 298 aaKnown RBP12.41□□□□□ -0.42
SSB-206ENST00000461708 BTF3P20290 206 aaKnown RBP12.41□□□□□ -0.42
SSB-206ENST00000461708 HBG1P69891 147 aa12.41□□□□□ -0.42
SSB-206ENST00000461708 HBG2P69892 147 aa12.41□□□□□ -0.42
SSB-206ENST00000461708 PDE6HQ13956 83 aa12.41□□□□□ -0.42
SSB-206ENST00000461708 C18orf15Q96N68 181 aa12.41□□□□□ -0.42
SSB-206ENST00000461708 LINC00467Q9BRT7 94 aa12.41□□□□□ -0.42
SSB-206ENST00000461708 NUDT15Q9NV35 164 aa12.41□□□□□ -0.42
SSB-206ENST00000461708 PRELID1Q9Y255 219 aa12.41□□□□□ -0.42
SSB-206ENST00000461708 HSPG2P98160 4391 aa12.4□□□□□ -0.42
SSB-206ENST00000461708 TRBV19A0A075B6N1 114 aa12.4□□□□□ -0.42
SSB-206ENST00000461708 TRAV6A0A075B6T7 132 aa12.4□□□□□ -0.42
SSB-206ENST00000461708 TRAV12-3A0A0B4J271 114 aa12.4□□□□□ -0.42
SSB-206ENST00000461708 A0A1W2PPQ1 181 aa12.4□□□□□ -0.42
SSB-206ENST00000461708 GAGE12BA1L429 117 aa12.4□□□□□ -0.42
SSB-206ENST00000461708 FAM24AA6NFZ4 105 aa12.4□□□□□ -0.42
SSB-206ENST00000461708 MPDU1O75352 247 aa12.4□□□□□ -0.42
SSB-206ENST00000461708 GAGE7O76087 117 aa12.4□□□□□ -0.42
SSB-206ENST00000461708 GAGE12FP0CL80 117 aa12.4□□□□□ -0.42
SSB-206ENST00000461708 GAGE12GP0CL81 117 aa12.4□□□□□ -0.42
SSB-206ENST00000461708 GAGE12IP0CL82 117 aa12.4□□□□□ -0.42
SSB-206ENST00000461708 HOXA5P20719 270 aa12.4□□□□□ -0.42
SSB-206ENST00000461708 ATP6V1FQ16864 119 aa12.4□□□□□ -0.42
SSB-206ENST00000461708 STX12Q86Y82 276 aa12.4□□□□□ -0.42
SSB-206ENST00000461708 TMEM252Q8N6L7 170 aa12.4□□□□□ -0.42
SSB-206ENST00000461708 SEC22CQ9BRL7 303 aa12.4□□□□□ -0.42
SSB-206ENST00000461708 Q9H3A6 140 aa12.4□□□□□ -0.42
SSB-206ENST00000461708 HIST1H1EP10412 219 aaKnown RBP12.39□□□□□ -0.43
SSB-206ENST00000461708 ZNF680Q8NEM1 530 aa12.39□□□□□ -0.43
SSB-206ENST00000461708 LINC00477Q96M19 166 aa12.39□□□□□ -0.43
SSB-206ENST00000461708 NDUFA13Q9P0J0 144 aa12.39□□□□□ -0.43
SSB-206ENST00000461708 UBE2L5PA0A1B0GUS4 154 aa12.38□□□□□ -0.43
SSB-206ENST00000461708 KLLNB2CW77 178 aa12.38□□□□□ -0.43
SSB-206ENST00000461708 NMBP08949 121 aa12.38□□□□□ -0.43
SSB-206ENST00000461708 BAXQ07812 192 aa12.38□□□□□ -0.43
SSB-206ENST00000461708 FAM19A4Q96LR4 140 aa12.38□□□□□ -0.43
SSB-206ENST00000461708 CCDC32Q9BV29 185 aa12.38□□□□□ -0.43
SSB-206ENST00000461708 MRPS16Q9Y3D3 137 aaKnown RBP12.38□□□□□ -0.43
SSB-206ENST00000461708 IGSF23A1L1A6 192 aa12.37□□□□□ -0.43
SSB-206ENST00000461708 C7orf71A4D174 169 aa12.37□□□□□ -0.43
SSB-206ENST00000461708 ZNF324O75467 553 aaPredicted RBP12.37□□□□□ -0.43
SSB-206ENST00000461708 NDUFB4O95168 129 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms