RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 PXMP4Q9Y6I8 212 aa10.95□□□□□ -0.66
NUP50-213ENST00000461437 DYNC1H1Q14204 4646 aaKnown RBP10.95□□□□□ -0.66
NUP50-213ENST00000461437 A6NHS1 94 aa10.94□□□□□ -0.66
NUP50-213ENST00000461437 PYYP10082 97 aa10.94□□□□□ -0.66
NUP50-213ENST00000461437 CDKN1BP46527 198 aa10.94□□□□□ -0.66
NUP50-213ENST00000461437 RAB31Q13636 194 aa10.94□□□□□ -0.66
NUP50-213ENST00000461437 OXA1LQ15070 435 aa10.94□□□□□ -0.66
NUP50-213ENST00000461437 GFI1BQ5VTD9 330 aa10.94□□□□□ -0.66
NUP50-213ENST00000461437 STX12Q86Y82 276 aa10.94□□□□□ -0.66
NUP50-213ENST00000461437 THAP6Q8TBB0 222 aa10.94□□□□□ -0.66
NUP50-213ENST00000461437 H0YIZ8 118 aa10.93□□□□□ -0.66
NUP50-213ENST00000461437 M0R3E3 92 aa10.93□□□□□ -0.66
NUP50-213ENST00000461437 S100A11P31949 105 aa10.93□□□□□ -0.66
NUP50-213ENST00000461437 RPL29P47914 159 aaKnown RBP10.93□□□□□ -0.66
NUP50-213ENST00000461437 ERCC8Q13216 396 aa10.93□□□□□ -0.66
NUP50-213ENST00000461437 OR1L4Q8NGR5 311 aa10.93□□□□□ -0.66
NUP50-213ENST00000461437 PKHD1P08F94 4074 aa10.93□□□□□ -0.66
NUP50-213ENST00000461437 LYRM9A8MSI8 78 aa10.92□□□□□ -0.66
NUP50-213ENST00000461437 F5H768 121 aa10.92□□□□□ -0.66
NUP50-213ENST00000461437 CT45A10P0DMU9 189 aa10.92□□□□□ -0.66
NUP50-213ENST00000461437 TAS2R60P59551 318 aa10.92□□□□□ -0.66
NUP50-213ENST00000461437 HBG1P69891 147 aa10.92□□□□□ -0.66
NUP50-213ENST00000461437 HBG2P69892 147 aa10.92□□□□□ -0.66
NUP50-213ENST00000461437 CLINT1Q14677 625 aa10.92□□□□□ -0.66
NUP50-213ENST00000461437 OR5C1Q8NGR4 320 aa10.92□□□□□ -0.66
NUP50-213ENST00000461437 OR10J6PQ8NGY7 276 aa10.92□□□□□ -0.66
NUP50-213ENST00000461437 PFDN5Q99471 154 aa10.92□□□□□ -0.66
NUP50-213ENST00000461437 NPCDR1Q9BY65 106 aa10.92□□□□□ -0.66
NUP50-213ENST00000461437 NOP10Q9NPE3 64 aaKnown RBP10.92□□□□□ -0.66
NUP50-213ENST00000461437 RNF24Q9Y225 148 aa10.92□□□□□ -0.66
NUP50-213ENST00000461437 KIAA1109Q2LD37 5005 aa10.92□□□□□ -0.66
NUP50-213ENST00000461437 RTL8CO15255 209 aa10.91□□□□□ -0.66
NUP50-213ENST00000461437 NDUFB4O95168 129 aa10.91□□□□□ -0.66
NUP50-213ENST00000461437 TSPOP30536 169 aa10.91□□□□□ -0.66
NUP50-213ENST00000461437 LINC00299Q6ZSB3 139 aa10.91□□□□□ -0.66
NUP50-213ENST00000461437 BLNKQ8WV28 456 aa10.91□□□□□ -0.66
NUP50-213ENST00000461437 PKD1P98161 4303 aa10.91□□□□□ -0.66
NUP50-213ENST00000461437 TRAV12-3A0A0B4J271 114 aa10.9□□□□□ -0.66
NUP50-213ENST00000461437 INMT-MINDY4F8WBC2 141 aa10.9□□□□□ -0.66
NUP50-213ENST00000461437 ATP6V1FQ16864 119 aa10.9□□□□□ -0.66
NUP50-213ENST00000461437 MIR17HGQ75NE6 70 aa10.9□□□□□ -0.66
NUP50-213ENST00000461437 TMEM256Q8N2U0 113 aa10.9□□□□□ -0.66
NUP50-213ENST00000461437 EXOC3-AS1Q8N2X6 119 aa10.9□□□□□ -0.66
NUP50-213ENST00000461437 RNASE8Q8TDE3 154 aaKnown RBP10.9□□□□□ -0.66
NUP50-213ENST00000461437 C16orf74Q96GX8 76 aa10.9□□□□□ -0.66
NUP50-213ENST00000461437 FAM210BQ96KR6 192 aa10.9□□□□□ -0.66
NUP50-213ENST00000461437 SLC25A2Q9BXI2 301 aa10.9□□□□□ -0.66
NUP50-213ENST00000461437 PTTG2Q9NZH5 202 aa10.9□□□□□ -0.66
NUP50-213ENST00000461437 DNAH11Q96DT5 4516 aa10.9□□□□□ -0.67
NUP50-213ENST00000461437 TRBV19A0A075B6N1 114 aa10.89□□□□□ -0.67
NUP50-213ENST00000461437 NPIPB6E9PJ23 425 aa10.89□□□□□ -0.67
NUP50-213ENST00000461437 EIF3GO75821 320 aaKnown RBP eCLIP10.89□□□□□ -0.67
NUP50-213ENST00000461437 NUDT3O95989 172 aa10.89□□□□□ -0.67
NUP50-213ENST00000461437 H2BFSP57053 126 aa10.89□□□□□ -0.67
NUP50-213ENST00000461437 E5RGE8 158 aa10.88□□□□□ -0.67
NUP50-213ENST00000461437 H7BYZ3 331 aa10.88□□□□□ -0.67
NUP50-213ENST00000461437 TMEM263Q8WUH6 116 aaKnown RBP10.88□□□□□ -0.67
NUP50-213ENST00000461437 FAM167A-AS1Q96KT0 104 aa10.88□□□□□ -0.67
NUP50-213ENST00000461437 NMES1Q9C002 83 aa10.88□□□□□ -0.67
NUP50-213ENST00000461437 TIMM8BQ9Y5J9 83 aaPredicted RBP10.88□□□□□ -0.67
NUP50-213ENST00000461437 RYR1P21817 5038 aa10.87□□□□□ -0.67
NUP50-213ENST00000461437 IGKV2-40A0A087WW87 121 aaPredicted RBP10.87□□□□□ -0.67
NUP50-213ENST00000461437 A0A1B0GVY2 172 aa10.87□□□□□ -0.67
NUP50-213ENST00000461437 PRSS29PA6NIE9 313 aa10.87□□□□□ -0.67
NUP50-213ENST00000461437 IGKV2D-40P01614 121 aaPredicted RBP10.87□□□□□ -0.67
NUP50-213ENST00000461437 ATP5G1P05496 136 aa10.87□□□□□ -0.67
NUP50-213ENST00000461437 HIST1H1EP10412 219 aaKnown RBP10.87□□□□□ -0.67
NUP50-213ENST00000461437 ATP5G3P48201 142 aa10.87□□□□□ -0.67
NUP50-213ENST00000461437 BTN1A1Q13410 526 aa10.87□□□□□ -0.67
NUP50-213ENST00000461437 GUK1Q16774 197 aa10.87□□□□□ -0.67
NUP50-213ENST00000461437 FAM122CQ6P4D5 195 aa10.87□□□□□ -0.67
NUP50-213ENST00000461437 Q6ZQT7 251 aa10.87□□□□□ -0.67
NUP50-213ENST00000461437 CHAC2Q8WUX2 184 aa10.87□□□□□ -0.67
NUP50-213ENST00000461437 TMEM14CQ9P0S9 112 aa10.87□□□□□ -0.67
NUP50-213ENST00000461437 TIMM9Q9Y5J7 89 aa10.87□□□□□ -0.67
NUP50-213ENST00000461437 GAGE12BA1L429 117 aa10.86□□□□□ -0.67
NUP50-213ENST00000461437 CBY3A6NI87 242 aa10.86□□□□□ -0.67
NUP50-213ENST00000461437 GAGE7O76087 117 aa10.86□□□□□ -0.67
NUP50-213ENST00000461437 RLN2P04090 185 aa10.86□□□□□ -0.67
NUP50-213ENST00000461437 OR10J4P0C629 311 aa10.86□□□□□ -0.67
NUP50-213ENST00000461437 GAGE12FP0CL80 117 aa10.86□□□□□ -0.67
NUP50-213ENST00000461437 GAGE12GP0CL81 117 aa10.86□□□□□ -0.67
NUP50-213ENST00000461437 GAGE12IP0CL82 117 aa10.86□□□□□ -0.67
NUP50-213ENST00000461437 LEPP41159 167 aa10.86□□□□□ -0.67
NUP50-213ENST00000461437 CD300CQ08708 224 aa10.86□□□□□ -0.67
NUP50-213ENST00000461437 ICAM4Q14773 271 aa10.86□□□□□ -0.67
NUP50-213ENST00000461437 LGALS9BQ3B8N2 356 aa10.86□□□□□ -0.67
NUP50-213ENST00000461437 Q6ZR54 194 aa10.86□□□□□ -0.67
NUP50-213ENST00000461437 RNF141Q8WVD5 230 aa10.86□□□□□ -0.67
NUP50-213ENST00000461437 PPP1R1CQ8WVI7 109 aa10.86□□□□□ -0.67
NUP50-213ENST00000461437 SMIM3Q9BZL3 60 aa10.86□□□□□ -0.67
NUP50-213ENST00000461437 WDR61Q9GZS3 305 aaKnown RBP10.86□□□□□ -0.67
NUP50-213ENST00000461437 SLC25A31Q9H0C2 315 aa10.86□□□□□ -0.67
NUP50-213ENST00000461437 MUC4Q99102 2169 aa10.86□□□□□ -0.67
NUP50-213ENST00000461437 SSNA1O43805 119 aa10.85□□□□□ -0.67
NUP50-213ENST00000461437 PRAF2O60831 178 aa10.85□□□□□ -0.67
NUP50-213ENST00000461437 ZNF253O75346 499 aa10.85□□□□□ -0.67
NUP50-213ENST00000461437 MPDU1O75352 247 aa10.85□□□□□ -0.67
NUP50-213ENST00000461437 PRR9Q5T870 116 aa10.85□□□□□ -0.67
NUP50-213ENST00000461437 LINC00336Q6ZUF6 198 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms