RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 TMEM14CQ9P0S9 112 aa11.07□□□□□ -0.64
VARS-219ENST00000461328 TRBV19A0A075B6N1 114 aa11.06□□□□□ -0.64
VARS-219ENST00000461328 LOC102723971A0A1B0GUV8 181 aa11.06□□□□□ -0.64
VARS-219ENST00000461328 ZNF253O75346 499 aa11.06□□□□□ -0.64
VARS-219ENST00000461328 HIST1H1EP10412 219 aaKnown RBP11.06□□□□□ -0.64
VARS-219ENST00000461328 SAT2Q96F10 170 aaPredicted RBP11.06□□□□□ -0.64
VARS-219ENST00000461328 SLC25A2Q9BXI2 301 aa11.06□□□□□ -0.64
VARS-219ENST00000461328 PLECQ15149 4684 aaKnown RBP11.06□□□□□ -0.64
VARS-219ENST00000461328 TRAV10A0A0B4J240 114 aa11.05□□□□□ -0.64
VARS-219ENST00000461328 IGLL5B9A064 214 aa11.05□□□□□ -0.64
VARS-219ENST00000461328 SPART-AS1P0CW21 52 aa11.05□□□□□ -0.64
VARS-219ENST00000461328 TCTAP57738 103 aa11.05□□□□□ -0.64
VARS-219ENST00000461328 LGALS9CQ6DKI2 356 aa11.05□□□□□ -0.64
VARS-219ENST00000461328 TEX48A0A1B0GUV7 120 aa11.04□□□□□ -0.64
VARS-219ENST00000461328 PRAC2D3DTV9 90 aa11.04□□□□□ -0.64
VARS-219ENST00000461328 OR7C2O60412 319 aa11.04□□□□□ -0.64
VARS-219ENST00000461328 GIPP09681 153 aaPredicted RBP11.04□□□□□ -0.64
VARS-219ENST00000461328 CDKN1BP46527 198 aa11.04□□□□□ -0.64
VARS-219ENST00000461328 PDE6HQ13956 83 aa11.04□□□□□ -0.64
VARS-219ENST00000461328 PAXXQ9BUH6 204 aa11.04□□□□□ -0.64
VARS-219ENST00000461328 AAMDCQ9H7C9 122 aa11.04□□□□□ -0.64
VARS-219ENST00000461328 FUT9Q9Y231 359 aa11.04□□□□□ -0.64
VARS-219ENST00000461328 HYDINQ4G0P3 5121 aa11.04□□□□□ -0.64
VARS-219ENST00000461328 ZNF705GA8MUZ8 300 aaPredicted RBP11.03□□□□□ -0.64
VARS-219ENST00000461328 CRXO43186 299 aaPredicted RBP11.03□□□□□ -0.64
VARS-219ENST00000461328 OR10J4P0C629 311 aa11.03□□□□□ -0.64
VARS-219ENST00000461328 TSPOP30536 169 aa11.03□□□□□ -0.64
VARS-219ENST00000461328 C12orf74Q32Q52 190 aa11.03□□□□□ -0.64
VARS-219ENST00000461328 RPP25LQ8N5L8 163 aaKnown RBP11.03□□□□□ -0.64
VARS-219ENST00000461328 MRPL53Q96EL3 112 aaKnown RBP11.03□□□□□ -0.64
VARS-219ENST00000461328 FAM167A-AS1Q96KT0 104 aa11.03□□□□□ -0.64
VARS-219ENST00000461328 LINC01587Q99440 93 aa11.03□□□□□ -0.64
VARS-219ENST00000461328 OR51M1Q9H341 326 aa11.03□□□□□ -0.64
VARS-219ENST00000461328 WFDC1Q9HC57 220 aa11.03□□□□□ -0.64
VARS-219ENST00000461328 PRELID1Q9Y255 219 aa11.03□□□□□ -0.64
VARS-219ENST00000461328 YTHDF2Q9Y5A9 579 aaKnown RBP11.03□□□□□ -0.64
VARS-219ENST00000461328 J3KRW8 73 aa11.02□□□□□ -0.65
VARS-219ENST00000461328 M0R3E3 92 aa11.02□□□□□ -0.65
VARS-219ENST00000461328 HTN1P15515 57 aa11.02□□□□□ -0.65
VARS-219ENST00000461328 ZNF266Q14584 549 aa11.02□□□□□ -0.65
VARS-219ENST00000461328 FAM222AQ5U5X8 452 aa11.02□□□□□ -0.65
VARS-219ENST00000461328 TMEM256Q8N2U0 113 aa11.02□□□□□ -0.65
VARS-219ENST00000461328 EXOC3-AS1Q8N2X6 119 aa11.02□□□□□ -0.65
VARS-219ENST00000461328 ASB13Q8WXK3 278 aa11.02□□□□□ -0.65
VARS-219ENST00000461328 PARD6GQ9BYG4 376 aaPredicted RBP11.02□□□□□ -0.65
VARS-219ENST00000461328 APLNQ9ULZ1 77 aa11.02□□□□□ -0.65
VARS-219ENST00000461328 FXYD6-FXYD2A0A087WZ82 144 aa11.01□□□□□ -0.65
VARS-219ENST00000461328 DEFB131BA0A096LNP1 70 aa11.01□□□□□ -0.65
VARS-219ENST00000461328 NDUFB4O95168 129 aa11.01□□□□□ -0.65
VARS-219ENST00000461328 NBEAP1P0C6P0 100 aa11.01□□□□□ -0.65
VARS-219ENST00000461328 LEPP41159 167 aa11.01□□□□□ -0.65
VARS-219ENST00000461328 TAS2R45P59539 299 aa11.01□□□□□ -0.65
VARS-219ENST00000461328 UBE2L3P68036 154 aaKnown RBP11.01□□□□□ -0.65
VARS-219ENST00000461328 ICAM4Q14773 271 aa11.01□□□□□ -0.65
VARS-219ENST00000461328 ACOT6Q3I5F7 207 aaPredicted RBP11.01□□□□□ -0.65
VARS-219ENST00000461328 KHDC3LQ587J8 217 aa11.01□□□□□ -0.65
VARS-219ENST00000461328 FAM122CQ6P4D5 195 aa11.01□□□□□ -0.65
VARS-219ENST00000461328 INO80EQ8NBZ0 244 aaPredicted RBP11.01□□□□□ -0.65
VARS-219ENST00000461328 RNF141Q8WVD5 230 aa11.01□□□□□ -0.65
VARS-219ENST00000461328 DKK2Q9UBU2 259 aa11.01□□□□□ -0.65
VARS-219ENST00000461328 IGHV4-4A0A075B6R2 117 aa11□□□□□ -0.65
VARS-219ENST00000461328 NPIPB6E9PJ23 425 aa11□□□□□ -0.65
VARS-219ENST00000461328 PRM2P04554 102 aa11□□□□□ -0.65
VARS-219ENST00000461328 FXYD5Q96DB9 178 aa11□□□□□ -0.65
VARS-219ENST00000461328 AQP10Q96PS8 301 aa11□□□□□ -0.65
VARS-219ENST00000461328 NIPSNAP3BQ9BS92 247 aa11□□□□□ -0.65
VARS-219ENST00000461328 A0A1W2PPV4 95 aa10.99□□□□□ -0.65
VARS-219ENST00000461328 HTN3P15516 51 aa10.99□□□□□ -0.65
VARS-219ENST00000461328 TAS2R60P59551 318 aa10.99□□□□□ -0.65
VARS-219ENST00000461328 DAD1P61803 113 aa10.99□□□□□ -0.65
VARS-219ENST00000461328 OXA1LQ15070 435 aa10.99□□□□□ -0.65
VARS-219ENST00000461328 HSD17B11Q8NBQ5 300 aa10.99□□□□□ -0.65
VARS-219ENST00000461328 OR2T35Q8NGX2 323 aa10.99□□□□□ -0.65
VARS-219ENST00000461328 PHYHIPLQ96FC7 376 aa10.99□□□□□ -0.65
VARS-219ENST00000461328 ODF3Q96PU9 254 aa10.99□□□□□ -0.65
VARS-219ENST00000461328 IGKV2-40A0A087WW87 121 aaPredicted RBP10.98□□□□□ -0.65
VARS-219ENST00000461328 H7BYZ3 331 aa10.98□□□□□ -0.65
VARS-219ENST00000461328 EIF3GO75821 320 aaKnown RBP eCLIP10.98□□□□□ -0.65
VARS-219ENST00000461328 IGKV2D-40P01614 121 aaPredicted RBP10.98□□□□□ -0.65
VARS-219ENST00000461328 CT45A10P0DMU9 189 aa10.98□□□□□ -0.65
VARS-219ENST00000461328 M6PRP20645 277 aa10.98□□□□□ -0.65
VARS-219ENST00000461328 RAB2AP61019 212 aa10.98□□□□□ -0.65
VARS-219ENST00000461328 ERCC8Q13216 396 aa10.98□□□□□ -0.65
VARS-219ENST00000461328 KIR3DS1Q14943 382 aa10.98□□□□□ -0.65
VARS-219ENST00000461328 Q5BKY6 102 aa10.98□□□□□ -0.65
VARS-219ENST00000461328 GFI1BQ5VTD9 330 aa10.98□□□□□ -0.65
VARS-219ENST00000461328 C16orf74Q96GX8 76 aa10.98□□□□□ -0.65
VARS-219ENST00000461328 C20orf144Q9BQM9 153 aa10.98□□□□□ -0.65
VARS-219ENST00000461328 CSN1S1P47710 185 aa10.97□□□□□ -0.65
VARS-219ENST00000461328 RANP62826 216 aaKnown RBP10.97□□□□□ -0.65
VARS-219ENST00000461328 TMEM78Q5T7P6 136 aa10.97□□□□□ -0.65
VARS-219ENST00000461328 OR10G4Q8NGN3 311 aa10.97□□□□□ -0.65
VARS-219ENST00000461328 OR10G9Q8NGN4 311 aa10.97□□□□□ -0.65
VARS-219ENST00000461328 OR10G7Q8NGN6 311 aa10.97□□□□□ -0.65
VARS-219ENST00000461328 PLA2G2EQ9NZK7 142 aa10.97□□□□□ -0.65
VARS-219ENST00000461328 TRAV12-3A0A0B4J271 114 aa10.96□□□□□ -0.65
VARS-219ENST00000461328 LYRM9A8MSI8 78 aa10.96□□□□□ -0.65
VARS-219ENST00000461328 AZU1P20160 251 aa10.96□□□□□ -0.65
VARS-219ENST00000461328 CCDC28AQ8IWP9 274 aa10.96□□□□□ -0.65
VARS-219ENST00000461328 ZNF503Q96F45 646 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms