RNA–Protein interactions for RNA: ENST00000460957.1

GGA1-216, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 2

Gene GGA1, Length 790 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-216ENST00000460957 PRELID1Q9Y255 219 aa11.48□□□□□ -0.57
GGA1-216ENST00000460957 FXYD6-FXYD2A0A087WZ82 144 aa11.47□□□□□ -0.57
GGA1-216ENST00000460957 TEX48A0A1B0GUV7 120 aa11.47□□□□□ -0.57
GGA1-216ENST00000460957 LOC102723971A0A1B0GUV8 181 aa11.47□□□□□ -0.57
GGA1-216ENST00000460957 A0A1W2PPV4 95 aa11.47□□□□□ -0.57
GGA1-216ENST00000460957 SPART-AS1P0CW21 52 aa11.47□□□□□ -0.57
GGA1-216ENST00000460957 CDKN1BP46527 198 aa11.47□□□□□ -0.57
GGA1-216ENST00000460957 PDE6HQ13956 83 aa11.47□□□□□ -0.57
GGA1-216ENST00000460957 KHDC3LQ587J8 217 aa11.47□□□□□ -0.57
GGA1-216ENST00000460957 C1orf158Q8N1D5 194 aa11.47□□□□□ -0.57
GGA1-216ENST00000460957 LINC01587Q99440 93 aa11.47□□□□□ -0.57
GGA1-216ENST00000460957 PARD6GQ9BYG4 376 aaPredicted RBP11.47□□□□□ -0.57
GGA1-216ENST00000460957 DNAH7Q8WXX0 4024 aa11.46□□□□□ -0.57
GGA1-216ENST00000460957 TRAV10A0A0B4J240 114 aa11.46□□□□□ -0.57
GGA1-216ENST00000460957 LY6G6CO95867 125 aa11.46□□□□□ -0.57
GGA1-216ENST00000460957 OR10J4P0C629 311 aa11.46□□□□□ -0.57
GGA1-216ENST00000460957 NBEAP1P0C6P0 100 aa11.46□□□□□ -0.57
GGA1-216ENST00000460957 HTN1P15515 57 aa11.46□□□□□ -0.57
GGA1-216ENST00000460957 RNF141Q8WVD5 230 aa11.46□□□□□ -0.57
GGA1-216ENST00000460957 MRPL53Q96EL3 112 aaKnown RBP11.46□□□□□ -0.57
GGA1-216ENST00000460957 WFDC1Q9HC57 220 aa11.46□□□□□ -0.57
GGA1-216ENST00000460957 IGLL5B9A064 214 aa11.45□□□□□ -0.58
GGA1-216ENST00000460957 J3KRW8 73 aa11.45□□□□□ -0.58
GGA1-216ENST00000460957 LEPP41159 167 aa11.45□□□□□ -0.58
GGA1-216ENST00000460957 UBE2L3P68036 154 aaKnown RBP11.45□□□□□ -0.58
GGA1-216ENST00000460957 ICAM4Q14773 271 aa11.45□□□□□ -0.58
GGA1-216ENST00000460957 OXA1LQ15070 435 aa11.45□□□□□ -0.58
GGA1-216ENST00000460957 Q6ZTC4 211 aa11.45□□□□□ -0.58
GGA1-216ENST00000460957 ZNF767PQ75MW2 155 aa11.45□□□□□ -0.58
GGA1-216ENST00000460957 TMEM256Q8N2U0 113 aa11.45□□□□□ -0.58
GGA1-216ENST00000460957 RPP25LQ8N5L8 163 aaKnown RBP11.45□□□□□ -0.58
GGA1-216ENST00000460957 HSD17B11Q8NBQ5 300 aa11.45□□□□□ -0.58
GGA1-216ENST00000460957 OR2T35Q8NGX2 323 aa11.45□□□□□ -0.58
GGA1-216ENST00000460957 AQP10Q96PS8 301 aa11.45□□□□□ -0.58
GGA1-216ENST00000460957 CELA1Q9UNI1 258 aa11.45□□□□□ -0.58
GGA1-216ENST00000460957 ZNF705GA8MUZ8 300 aaPredicted RBP11.44□□□□□ -0.58
GGA1-216ENST00000460957 PRAC2D3DTV9 90 aa11.44□□□□□ -0.58
GGA1-216ENST00000460957 M6PRP20645 277 aa11.44□□□□□ -0.58
GGA1-216ENST00000460957 CSN1S1P47710 185 aa11.44□□□□□ -0.58
GGA1-216ENST00000460957 FAM122CQ6P4D5 195 aa11.44□□□□□ -0.58
GGA1-216ENST00000460957 EXOC3-AS1Q8N2X6 119 aa11.44□□□□□ -0.58
GGA1-216ENST00000460957 BORCS7-ASMTA0A0B4J1R7 106 aa11.43□□□□□ -0.58
GGA1-216ENST00000460957 M0R3E3 92 aa11.43□□□□□ -0.58
GGA1-216ENST00000460957 CRXO43186 299 aaPredicted RBP11.43□□□□□ -0.58
GGA1-216ENST00000460957 FAM222AQ5U5X8 452 aa11.43□□□□□ -0.58
GGA1-216ENST00000460957 FAM167A-AS1Q96KT0 104 aa11.43□□□□□ -0.58
GGA1-216ENST00000460957 YTHDF2Q9Y5A9 579 aaKnown RBP11.43□□□□□ -0.58
GGA1-216ENST00000460957 DEFB131BA0A096LNP1 70 aa11.42□□□□□ -0.58
GGA1-216ENST00000460957 NDUFB4O95168 129 aa11.42□□□□□ -0.58
GGA1-216ENST00000460957 RANP62826 216 aaKnown RBP11.42□□□□□ -0.58
GGA1-216ENST00000460957 C12orf74Q32Q52 190 aa11.42□□□□□ -0.58
GGA1-216ENST00000460957 TMEM78Q5T7P6 136 aa11.42□□□□□ -0.58
GGA1-216ENST00000460957 OR10G4Q8NGN3 311 aa11.42□□□□□ -0.58
GGA1-216ENST00000460957 OR10G9Q8NGN4 311 aa11.42□□□□□ -0.58
GGA1-216ENST00000460957 OR10G7Q8NGN6 311 aa11.42□□□□□ -0.58
GGA1-216ENST00000460957 NIPSNAP3BQ9BS92 247 aa11.42□□□□□ -0.58
GGA1-216ENST00000460957 NPIPB6E9PJ23 425 aa11.41□□□□□ -0.58
GGA1-216ENST00000460957 TCTAP57738 103 aa11.41□□□□□ -0.58
GGA1-216ENST00000460957 TAS2R60P59551 318 aa11.41□□□□□ -0.58
GGA1-216ENST00000460957 DAD1P61803 113 aa11.41□□□□□ -0.58
GGA1-216ENST00000460957 Q5BKY6 102 aa11.41□□□□□ -0.58
GGA1-216ENST00000460957 FAM74A1Q5RGS3 127 aa11.41□□□□□ -0.58
GGA1-216ENST00000460957 CCDC28AQ8IWP9 274 aa11.41□□□□□ -0.58
GGA1-216ENST00000460957 LINC00476Q8WZB0 136 aa11.41□□□□□ -0.58
GGA1-216ENST00000460957 FXYD5Q96DB9 178 aa11.41□□□□□ -0.58
GGA1-216ENST00000460957 LINC00477Q96M19 166 aa11.41□□□□□ -0.58
GGA1-216ENST00000460957 C20orf144Q9BQM9 153 aa11.41□□□□□ -0.58
GGA1-216ENST00000460957 DKK2Q9UBU2 259 aa11.41□□□□□ -0.58
GGA1-216ENST00000460957 H7BYZ3 331 aa11.4□□□□□ -0.58
GGA1-216ENST00000460957 MBP02144 154 aa11.4□□□□□ -0.58
GGA1-216ENST00000460957 HTN3P15516 51 aa11.4□□□□□ -0.58
GGA1-216ENST00000460957 CDC34P49427 236 aaPredicted RBP11.4□□□□□ -0.58
GGA1-216ENST00000460957 RAB2AP61019 212 aa11.4□□□□□ -0.58
GGA1-216ENST00000460957 ERCC8Q13216 396 aa11.4□□□□□ -0.58
GGA1-216ENST00000460957 PQLC2Q6ZP29 291 aa11.4□□□□□ -0.58
GGA1-216ENST00000460957 PHYHIPLQ96FC7 376 aa11.4□□□□□ -0.58
GGA1-216ENST00000460957 C16orf74Q96GX8 76 aa11.4□□□□□ -0.58
GGA1-216ENST00000460957 ODF3Q96PU9 254 aa11.4□□□□□ -0.58
GGA1-216ENST00000460957 PSMG3Q9BT73 122 aaPredicted RBP11.4□□□□□ -0.58
GGA1-216ENST00000460957 Q9H3A6 140 aa11.4□□□□□ -0.58
GGA1-216ENST00000460957 IGKV2-40A0A087WW87 121 aaPredicted RBP11.39□□□□□ -0.59
GGA1-216ENST00000460957 IGKV2D-40P01614 121 aaPredicted RBP11.39□□□□□ -0.59
GGA1-216ENST00000460957 CT45A10P0DMU9 189 aa11.39□□□□□ -0.59
GGA1-216ENST00000460957 ATP6V0CP27449 155 aa11.39□□□□□ -0.59
GGA1-216ENST00000460957 LYPD1Q8N2G4 141 aa11.39□□□□□ -0.59
GGA1-216ENST00000460957 CMTM2Q8TAZ6 248 aa11.39□□□□□ -0.59
GGA1-216ENST00000460957 GNPNAT1Q96EK6 184 aaPredicted RBP11.39□□□□□ -0.59
GGA1-216ENST00000460957 TNFSF18Q9UNG2 199 aa11.39□□□□□ -0.59
GGA1-216ENST00000460957 TENM2Q9NT68 2774 aa11.38□□□□□ -0.59
GGA1-216ENST00000460957 IGHV4-4A0A075B6R2 117 aa11.38□□□□□ -0.59
GGA1-216ENST00000460957 TRAV12-3A0A0B4J271 114 aa11.38□□□□□ -0.59
GGA1-216ENST00000460957 HMGB3O15347 200 aaKnown RBP11.38□□□□□ -0.59
GGA1-216ENST00000460957 ARPC5O15511 151 aa11.38□□□□□ -0.59
GGA1-216ENST00000460957 EIF3GO75821 320 aaKnown RBP eCLIP11.38□□□□□ -0.59
GGA1-216ENST00000460957 PRM2P04554 102 aa11.38□□□□□ -0.59
GGA1-216ENST00000460957 SLC25A5P05141 298 aaKnown RBP11.38□□□□□ -0.59
GGA1-216ENST00000460957 GPX1P07203 203 aa11.38□□□□□ -0.59
GGA1-216ENST00000460957 SERF2P84101 59 aa11.38□□□□□ -0.59
GGA1-216ENST00000460957 GFI1BQ5VTD9 330 aa11.38□□□□□ -0.59
GGA1-216ENST00000460957 HYLS1Q96M11 299 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms