RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 LYPD1Q8N2G4 141 aa16.52■□□□□ 0.24
C9orf3-209ENST00000460573 MRPL53Q96EL3 112 aaKnown RBP16.52■□□□□ 0.24
C9orf3-209ENST00000460573 PHYHIPLQ96FC7 376 aa16.52■□□□□ 0.24
C9orf3-209ENST00000460573 AAMDCQ9H7C9 122 aa16.52■□□□□ 0.24
C9orf3-209ENST00000460573 CTXND1A0A1B0GTU2 59 aa16.51■□□□□ 0.23
C9orf3-209ENST00000460573 DUSP14O95147 198 aaKnown RBP16.51■□□□□ 0.23
C9orf3-209ENST00000460573 ZNF680Q8NEM1 530 aa16.51■□□□□ 0.23
C9orf3-209ENST00000460573 RPUSD4Q96CM3 377 aaKnown RBP16.51■□□□□ 0.23
C9orf3-209ENST00000460573 DNAH9Q9NYC9 4486 aa16.51■□□□□ 0.23
C9orf3-209ENST00000460573 C3orf84H3BNL1 204 aa16.5■□□□□ 0.23
C9orf3-209ENST00000460573 HLA-DMBP28068 263 aa16.5■□□□□ 0.23
C9orf3-209ENST00000460573 GDF5OSQ5U4N7 250 aa16.5■□□□□ 0.23
C9orf3-209ENST00000460573 Q6ZWC4 215 aa16.5■□□□□ 0.23
C9orf3-209ENST00000460573 HMGB3O15347 200 aaKnown RBP16.49■□□□□ 0.23
C9orf3-209ENST00000460573 CXorf1O96002 111 aa16.49■□□□□ 0.23
C9orf3-209ENST00000460573 ARL14EPLP0DKL9 152 aa16.49■□□□□ 0.23
C9orf3-209ENST00000460573 F6UB75 175 aa16.48■□□□□ 0.23
C9orf3-209ENST00000460573 EIF3GO75821 320 aaKnown RBP eCLIP16.48■□□□□ 0.23
C9orf3-209ENST00000460573 DEFB1P60022 68 aa16.48■□□□□ 0.23
C9orf3-209ENST00000460573 DPPA3Q6W0C5 159 aa16.48■□□□□ 0.23
C9orf3-209ENST00000460573 OR4B1Q8NGF8 309 aa16.48■□□□□ 0.23
C9orf3-209ENST00000460573 OR8A1Q8NGG7 326 aa16.48■□□□□ 0.23
C9orf3-209ENST00000460573 TP53TG1Q9Y2A0 90 aa16.48■□□□□ 0.23
C9orf3-209ENST00000460573 A8MTW9 85 aa16.47■□□□□ 0.23
C9orf3-209ENST00000460573 CA1P00915 261 aaPredicted RBP16.47■□□□□ 0.23
C9orf3-209ENST00000460573 ZNF726P1Q15940 193 aa16.47■□□□□ 0.23
C9orf3-209ENST00000460573 SUN5Q8TC36 379 aa16.47■□□□□ 0.23
C9orf3-209ENST00000460573 TMED6Q8WW62 240 aa16.47■□□□□ 0.23
C9orf3-209ENST00000460573 C1QTNF4Q9BXJ3 329 aa16.47■□□□□ 0.23
C9orf3-209ENST00000460573 TMEM167BQ9NRX6 74 aa16.47■□□□□ 0.23
C9orf3-209ENST00000460573 ZNF705FA8MVS1 300 aaPredicted RBP16.46■□□□□ 0.23
C9orf3-209ENST00000460573 GCHFRP30047 84 aa16.46■□□□□ 0.23
C9orf3-209ENST00000460573 RANP62826 216 aaKnown RBP16.46■□□□□ 0.23
C9orf3-209ENST00000460573 ICAM4Q14773 271 aa16.46■□□□□ 0.23
C9orf3-209ENST00000460573 EXOC3-AS1Q8N2X6 119 aa16.46■□□□□ 0.23
C9orf3-209ENST00000460573 OR10J6PQ8NGY7 276 aa16.46■□□□□ 0.23
C9orf3-209ENST00000460573 MUC7Q8TAX7 377 aa16.46■□□□□ 0.23
C9orf3-209ENST00000460573 RAB5CP51148 216 aa16.45■□□□□ 0.22
C9orf3-209ENST00000460573 CNN1P51911 297 aaKnown RBP16.45■□□□□ 0.22
C9orf3-209ENST00000460573 FAM74A1Q5RGS3 127 aa16.45■□□□□ 0.22
C9orf3-209ENST00000460573 SSX7Q7RTT5 188 aa16.45■□□□□ 0.22
C9orf3-209ENST00000460573 Q9H3A6 140 aa16.45■□□□□ 0.22
C9orf3-209ENST00000460573 PLA2G2EQ9NZK7 142 aa16.45■□□□□ 0.22
C9orf3-209ENST00000460573 IGKV3-20P01619 116 aa16.44■□□□□ 0.22
C9orf3-209ENST00000460573 CSN1S1P47710 185 aa16.44■□□□□ 0.22
C9orf3-209ENST00000460573 HIST1H1AQ02539 215 aaPredicted RBP16.44■□□□□ 0.22
C9orf3-209ENST00000460573 RNF183Q96D59 192 aa16.44■□□□□ 0.22
C9orf3-209ENST00000460573 OTORQ9NRC9 128 aa16.44■□□□□ 0.22
C9orf3-209ENST00000460573 AGRNO00468 2067 aa16.43■□□□□ 0.22
C9orf3-209ENST00000460573 MAP1LC3B2A6NCE7 125 aa16.43■□□□□ 0.22
C9orf3-209ENST00000460573 M0R3E3 92 aa16.43■□□□□ 0.22
C9orf3-209ENST00000460573 SPRY2O43597 315 aa16.43■□□□□ 0.22
C9orf3-209ENST00000460573 RAB14P61106 215 aa16.43■□□□□ 0.22
C9orf3-209ENST00000460573 DEFB135Q30KP9 77 aa16.43■□□□□ 0.22
C9orf3-209ENST00000460573 ARL6IP6Q8N6S5 226 aa16.43■□□□□ 0.22
C9orf3-209ENST00000460573 RXFP4Q8TDU9 374 aa16.43■□□□□ 0.22
C9orf3-209ENST00000460573 MAP1LC3BQ9GZQ8 125 aa16.43■□□□□ 0.22
C9orf3-209ENST00000460573 PRAC2D3DTV9 90 aa16.42■□□□□ 0.22
C9orf3-209ENST00000460573 GIG44P09565 113 aaPredicted RBP16.42■□□□□ 0.22
C9orf3-209ENST00000460573 ZNF705DP0CH99 300 aaPredicted RBP16.42■□□□□ 0.22
C9orf3-209ENST00000460573 ZNF705BP0CI00 300 aaPredicted RBP16.42■□□□□ 0.22
C9orf3-209ENST00000460573 NDUFA5Q16718 116 aa16.42■□□□□ 0.22
C9orf3-209ENST00000460573 FAM213BQ8TBF2 198 aa16.42■□□□□ 0.22
C9orf3-209ENST00000460573 MBD3L1Q8WWY6 194 aa16.42■□□□□ 0.22
C9orf3-209ENST00000460573 OVOL2Q9BRP0 275 aa16.42■□□□□ 0.22
C9orf3-209ENST00000460573 PPP1R14DQ9NXH3 145 aa16.42■□□□□ 0.22
C9orf3-209ENST00000460573 TENM3Q9P273 2699 aa16.42■□□□□ 0.22
C9orf3-209ENST00000460573 PGPA6NDG6 321 aa16.41■□□□□ 0.22
C9orf3-209ENST00000460573 AMBPP02760 352 aa16.41■□□□□ 0.22
C9orf3-209ENST00000460573 FHITP49789 147 aa16.41■□□□□ 0.22
C9orf3-209ENST00000460573 AMTNQ6UX39 209 aa16.41■□□□□ 0.22
C9orf3-209ENST00000460573 NPIPB6E9PJ23 425 aa16.4■□□□□ 0.22
C9orf3-209ENST00000460573 IQCF2Q8IXL9 164 aa16.4■□□□□ 0.22
C9orf3-209ENST00000460573 RETNQ9HD89 108 aa16.4■□□□□ 0.22
C9orf3-209ENST00000460573 A0A1W2PRE2 83 aa16.39■□□□□ 0.21
C9orf3-209ENST00000460573 H2AFB1P0C5Y9 115 aa16.39■□□□□ 0.21
C9orf3-209ENST00000460573 SULT1A2P50226 295 aa16.39■□□□□ 0.21
C9orf3-209ENST00000460573 CMTM2Q8TAZ6 248 aa16.39■□□□□ 0.21
C9orf3-209ENST00000460573 LINC00477Q96M19 166 aa16.39■□□□□ 0.21
C9orf3-209ENST00000460573 SLC35B3Q9H1N7 401 aa16.39■□□□□ 0.21
C9orf3-209ENST00000460573 XCL2Q9UBD3 114 aa16.39■□□□□ 0.21
C9orf3-209ENST00000460573 RBAKDNA6NC62 111 aa16.38■□□□□ 0.21
C9orf3-209ENST00000460573 FGF8P55075 233 aaPredicted RBP16.38■□□□□ 0.21
C9orf3-209ENST00000460573 CLLU1Q5K131 121 aa16.38■□□□□ 0.21
C9orf3-209ENST00000460573 ALKAL2Q6UX46 152 aa16.38■□□□□ 0.21
C9orf3-209ENST00000460573 CSNK1G2-AS1Q8NCQ2 148 aa16.38■□□□□ 0.21
C9orf3-209ENST00000460573 SFT2D1Q8WV19 159 aa16.38■□□□□ 0.21
C9orf3-209ENST00000460573 ODF3Q96PU9 254 aa16.38■□□□□ 0.21
C9orf3-209ENST00000460573 NKX6-2Q9C056 277 aaPredicted RBP16.38■□□□□ 0.21
C9orf3-209ENST00000460573 SLC25A5P05141 298 aaKnown RBP16.37■□□□□ 0.21
C9orf3-209ENST00000460573 TSPOP30536 169 aa16.37■□□□□ 0.21
C9orf3-209ENST00000460573 CASC10Q5T4H9 136 aa16.37■□□□□ 0.21
C9orf3-209ENST00000460573 C9orf47Q6ZRZ4 202 aa16.37■□□□□ 0.21
C9orf3-209ENST00000460573 TMPRSS5Q9H3S3 457 aa16.37■□□□□ 0.21
C9orf3-209ENST00000460573 FXYD7P58549 80 aa16.36■□□□□ 0.21
C9orf3-209ENST00000460573 RARRES2Q99969 163 aa16.36■□□□□ 0.21
C9orf3-209ENST00000460573 DIRC3C9JPN6 131 aa16.35■□□□□ 0.21
C9orf3-209ENST00000460573 TEX46H3BTG2 121 aa16.35■□□□□ 0.21
C9orf3-209ENST00000460573 PRB4P10163 310 aaPredicted RBP16.35■□□□□ 0.21
C9orf3-209ENST00000460573 CDKN1BP46527 198 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms