RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 PRH1P02810 166 aa8.23□□□□□ -1.09
HERC4-207ENST00000460168 NTF3P20783 257 aa8.23□□□□□ -1.09
HERC4-207ENST00000460168 ADAMTSL5Q6ZMM2 481 aa8.23□□□□□ -1.09
HERC4-207ENST00000460168 C16orf82Q7Z2V1 217 aa8.23□□□□□ -1.09
HERC4-207ENST00000460168 SAMD10Q9BYL1 202 aa8.23□□□□□ -1.09
HERC4-207ENST00000460168 FBXL15Q9H469 300 aa8.23□□□□□ -1.09
HERC4-207ENST00000460168 NDUFA4L2Q9NRX3 87 aa8.23□□□□□ -1.09
HERC4-207ENST00000460168 SPCS1Q9Y6A9 102 aa8.23□□□□□ -1.09
HERC4-207ENST00000460168 CSMD1Q96PZ7 3565 aa8.23□□□□□ -1.09
HERC4-207ENST00000460168 TRAV40A0A0B4J280 105 aa8.22□□□□□ -1.09
HERC4-207ENST00000460168 E7EUB6 86 aa8.22□□□□□ -1.09
HERC4-207ENST00000460168 NPFFO15130 113 aa8.22□□□□□ -1.09
HERC4-207ENST00000460168 MT-ATP8P03928 68 aa8.22□□□□□ -1.09
HERC4-207ENST00000460168 GPX1P07203 203 aa8.22□□□□□ -1.09
HERC4-207ENST00000460168 GNB1P62873 340 aa8.22□□□□□ -1.09
HERC4-207ENST00000460168 ERHP84090 104 aaKnown RBP8.22□□□□□ -1.09
HERC4-207ENST00000460168 ATP5G2Q06055 141 aa8.22□□□□□ -1.09
HERC4-207ENST00000460168 TMEM147Q9BVK8 224 aa8.22□□□□□ -1.09
HERC4-207ENST00000460168 C7orf69Q9H7B7 122 aa8.22□□□□□ -1.09
HERC4-207ENST00000460168 RNF114Q9Y508 228 aa8.22□□□□□ -1.09
HERC4-207ENST00000460168 TRAPPC1Q9Y5R8 145 aa8.22□□□□□ -1.09
HERC4-207ENST00000460168 IGHV3OR16-10A0A075B7F0 116 aa8.22□□□□□ -1.09
HERC4-207ENST00000460168 J3KT08 172 aa8.22□□□□□ -1.09
HERC4-207ENST00000460168 NBR2O15453 112 aa8.22□□□□□ -1.09
HERC4-207ENST00000460168 PLXNB1O43157 2135 aa8.22□□□□□ -1.09
HERC4-207ENST00000460168 OR2J3O76001 311 aa8.22□□□□□ -1.09
HERC4-207ENST00000460168 CA2P00918 260 aa8.22□□□□□ -1.09
HERC4-207ENST00000460168 FCGR2BP31994 310 aaPredicted RBP8.22□□□□□ -1.09
HERC4-207ENST00000460168 Q0VG73 95 aa8.22□□□□□ -1.09
HERC4-207ENST00000460168 SYT8Q8NBV8 401 aa8.22□□□□□ -1.09
HERC4-207ENST00000460168 GCN1Q92616 2671 aaKnown RBP8.21□□□□□ -1.09
HERC4-207ENST00000460168 RNF223E7ERA6 249 aa8.21□□□□□ -1.09
HERC4-207ENST00000460168 ZNF561-AS1K7EIQ3 104 aa8.21□□□□□ -1.09
HERC4-207ENST00000460168 SERF1AO75920 110 aa8.21□□□□□ -1.09
HERC4-207ENST00000460168 PPIFP30405 207 aaKnown RBP8.21□□□□□ -1.09
HERC4-207ENST00000460168 TIRAPP58753 221 aa8.21□□□□□ -1.09
HERC4-207ENST00000460168 Q6AWC8 147 aa8.21□□□□□ -1.09
HERC4-207ENST00000460168 PIP4P2Q8N4L2 257 aa8.21□□□□□ -1.09
HERC4-207ENST00000460168 TEX29Q8N6K0 151 aa8.21□□□□□ -1.09
HERC4-207ENST00000460168 MAPK1IP1LQ8NDC0 245 aa8.21□□□□□ -1.09
HERC4-207ENST00000460168 ZNRF2Q8NHG8 242 aa8.21□□□□□ -1.09
HERC4-207ENST00000460168 ZC2HC1AQ96GY0 325 aa8.21□□□□□ -1.09
HERC4-207ENST00000460168 V9GYY9 64 aa8.21□□□□□ -1.09
HERC4-207ENST00000460168 F8W1H4 67 aa8.21□□□□□ -1.1
HERC4-207ENST00000460168 SRD5A1P18405 259 aa8.21□□□□□ -1.1
HERC4-207ENST00000460168 RPL27AP46776 148 aaKnown RBP8.21□□□□□ -1.1
HERC4-207ENST00000460168 RPS28P62857 69 aaKnown RBP8.21□□□□□ -1.1
HERC4-207ENST00000460168 MRGPRG-AS1Q2M3A8 158 aa8.21□□□□□ -1.1
HERC4-207ENST00000460168 BRD3OSQ6XYD6 125 aa8.21□□□□□ -1.1
HERC4-207ENST00000460168 LINC01356Q8N9X3 169 aa8.21□□□□□ -1.1
HERC4-207ENST00000460168 OR1L4Q8NGR5 311 aa8.21□□□□□ -1.1
HERC4-207ENST00000460168 TAF15Q92804 592 aaKnown RBP eCLIP8.21□□□□□ -1.1
HERC4-207ENST00000460168 SIGLEC8Q9NYZ4 499 aa8.21□□□□□ -1.1
HERC4-207ENST00000460168 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.2□□□□□ -1.1
HERC4-207ENST00000460168 A0A096LNT2 108 aa8.2□□□□□ -1.1
HERC4-207ENST00000460168 IGHV1-69DA0A0B4J2H0 117 aa8.2□□□□□ -1.1
HERC4-207ENST00000460168 A0A1W2PPM0 123 aa8.2□□□□□ -1.1
HERC4-207ENST00000460168 NCBP2LA6PVI3 153 aaKnown RBP8.2□□□□□ -1.1
HERC4-207ENST00000460168 CA1P00915 261 aaPredicted RBP8.2□□□□□ -1.1
HERC4-207ENST00000460168 IGHV1-69P01742 117 aa8.2□□□□□ -1.1
HERC4-207ENST00000460168 FAM106CPP0CH98 169 aa8.2□□□□□ -1.1
HERC4-207ENST00000460168 IGLL1P15814 213 aa8.2□□□□□ -1.1
HERC4-207ENST00000460168 CCL20P78556 96 aa8.2□□□□□ -1.1
HERC4-207ENST00000460168 SRSF2Q01130 221 aaKnown RBP8.2□□□□□ -1.1
HERC4-207ENST00000460168 WT1-ASQ06250 92 aa8.2□□□□□ -1.1
HERC4-207ENST00000460168 RUSC1-AS1Q66K80 236 aa8.2□□□□□ -1.1
HERC4-207ENST00000460168 OR10G7Q8NGN6 311 aa8.2□□□□□ -1.1
HERC4-207ENST00000460168 NRN1Q9NPD7 142 aa8.2□□□□□ -1.1
HERC4-207ENST00000460168 LOC102723971A0A1B0GUV8 181 aa8.19□□□□□ -1.1
HERC4-207ENST00000460168 CGB1A6NKQ9 187 aa8.19□□□□□ -1.1
HERC4-207ENST00000460168 PRSS46E5RG02 174 aa8.19□□□□□ -1.1
HERC4-207ENST00000460168 FNDC10F2Z333 226 aa8.19□□□□□ -1.1
HERC4-207ENST00000460168 INS-IGF2F8WCM5 200 aa8.19□□□□□ -1.1
HERC4-207ENST00000460168 TMEM250H0YL14 139 aa8.19□□□□□ -1.1
HERC4-207ENST00000460168 APELAP0DMC3 54 aa8.19□□□□□ -1.1
HERC4-207ENST00000460168 NDUFV3P56181 108 aaKnown RBP8.19□□□□□ -1.1
HERC4-207ENST00000460168 LOXL1Q08397 574 aaPredicted RBP8.19□□□□□ -1.1
HERC4-207ENST00000460168 VWC2Q2TAL6 325 aa8.19□□□□□ -1.1
HERC4-207ENST00000460168 C2orf83Q53S99 150 aa8.19□□□□□ -1.1
HERC4-207ENST00000460168 NPBQ8NG41 125 aa8.19□□□□□ -1.1
HERC4-207ENST00000460168 FAM213BQ8TBF2 198 aa8.19□□□□□ -1.1
HERC4-207ENST00000460168 AJUBAQ96IF1 538 aa8.19□□□□□ -1.1
HERC4-207ENST00000460168 NAV3Q8IVL0 2385 aa8.19□□□□□ -1.1
HERC4-207ENST00000460168 A0A0U1RRA0 63 aa8.19□□□□□ -1.1
HERC4-207ENST00000460168 RHODO00212 210 aa8.19□□□□□ -1.1
HERC4-207ENST00000460168 FCN1O00602 326 aa8.19□□□□□ -1.1
HERC4-207ENST00000460168 NDUFA3O95167 84 aa8.19□□□□□ -1.1
HERC4-207ENST00000460168 CRYGDP07320 174 aa8.19□□□□□ -1.1
HERC4-207ENST00000460168 IGHV4-38-2P0DP08 117 aa8.19□□□□□ -1.1
HERC4-207ENST00000460168 RNASE2P10153 161 aaKnown RBP8.19□□□□□ -1.1
HERC4-207ENST00000460168 GATA2P23769 480 aaPredicted RBP8.19□□□□□ -1.1
HERC4-207ENST00000460168 SUB1P53999 127 aaKnown RBP eCLIP8.19□□□□□ -1.1
HERC4-207ENST00000460168 C18orf32Q8TCD1 76 aa8.19□□□□□ -1.1
HERC4-207ENST00000460168 SRSF12Q8WXF0 261 aaKnown RBP8.19□□□□□ -1.1
HERC4-207ENST00000460168 TMEM101Q96IK0 257 aa8.19□□□□□ -1.1
HERC4-207ENST00000460168 Q96MF0 132 aa8.19□□□□□ -1.1
HERC4-207ENST00000460168 NPCDR1Q9BY65 106 aa8.19□□□□□ -1.1
HERC4-207ENST00000460168 MAP1LC3AQ9H492 121 aa8.19□□□□□ -1.1
HERC4-207ENST00000460168 TINCRA0A1B0GVN0 87 aa8.18□□□□□ -1.1
HERC4-207ENST00000460168 H3BUT2 72 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms