RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 SLC25A31Q9H0C2 315 aa7.11□□□□□ -1.27
HDLBP-228ENST00000459788 PRELID1Q9Y255 219 aa7.11□□□□□ -1.27
HDLBP-228ENST00000459788 IGSF23A1L1A6 192 aa7.1□□□□□ -1.27
HDLBP-228ENST00000459788 S100A10P60903 97 aa7.1□□□□□ -1.27
HDLBP-228ENST00000459788 IGFL4Q6B9Z1 124 aa7.1□□□□□ -1.27
HDLBP-228ENST00000459788 ZNF767PQ75MW2 155 aa7.1□□□□□ -1.27
HDLBP-228ENST00000459788 TMEM263Q8WUH6 116 aaKnown RBP7.1□□□□□ -1.27
HDLBP-228ENST00000459788 CBY3A6NI87 242 aa7.09□□□□□ -1.27
HDLBP-228ENST00000459788 NMBP08949 121 aa7.09□□□□□ -1.27
HDLBP-228ENST00000459788 HIST1H1EP10412 219 aaKnown RBP7.09□□□□□ -1.27
HDLBP-228ENST00000459788 LEPP41159 167 aa7.09□□□□□ -1.27
HDLBP-228ENST00000459788 DEFA1P59665 94 aa7.09□□□□□ -1.27
HDLBP-228ENST00000459788 DEFA3P59666 94 aa7.09□□□□□ -1.27
HDLBP-228ENST00000459788 MIC13Q5XKP0 118 aa7.09□□□□□ -1.27
HDLBP-228ENST00000459788 BAP18Q8IXM2 172 aa7.09□□□□□ -1.27
HDLBP-228ENST00000459788 LINC01587Q99440 93 aa7.09□□□□□ -1.27
HDLBP-228ENST00000459788 MARVELD1Q9BSK0 173 aa7.09□□□□□ -1.27
HDLBP-228ENST00000459788 TIMM8BQ9Y5J9 83 aaPredicted RBP7.09□□□□□ -1.27
HDLBP-228ENST00000459788 DNAH17Q9UFH2 4485 aa7.08□□□□□ -1.28
HDLBP-228ENST00000459788 TRBV19A0A075B6N1 114 aa7.08□□□□□ -1.28
HDLBP-228ENST00000459788 UBE2L5PA0A1B0GUS4 154 aa7.08□□□□□ -1.28
HDLBP-228ENST00000459788 PLAC8L1A1L4L8 177 aa7.08□□□□□ -1.28
HDLBP-228ENST00000459788 ZNF705GA8MUZ8 300 aaPredicted RBP7.08□□□□□ -1.28
HDLBP-228ENST00000459788 NPIPB6E9PJ23 425 aa7.08□□□□□ -1.28
HDLBP-228ENST00000459788 INMT-MINDY4F8WBC2 141 aa7.08□□□□□ -1.28
HDLBP-228ENST00000459788 H3BQ15 152 aa7.08□□□□□ -1.28
HDLBP-228ENST00000459788 ATP5G1P05496 136 aa7.08□□□□□ -1.28
HDLBP-228ENST00000459788 PET100P0DJ07 73 aa7.08□□□□□ -1.28
HDLBP-228ENST00000459788 FGF7P21781 194 aa7.08□□□□□ -1.28
HDLBP-228ENST00000459788 ATP5G3P48201 142 aa7.08□□□□□ -1.28
HDLBP-228ENST00000459788 CCDC28AQ8IWP9 274 aa7.08□□□□□ -1.28
HDLBP-228ENST00000459788 RNASE8Q8TDE3 154 aaKnown RBP7.08□□□□□ -1.28
HDLBP-228ENST00000459788 LINC00477Q96M19 166 aa7.08□□□□□ -1.28
HDLBP-228ENST00000459788 NPCDR1Q9BY65 106 aa7.08□□□□□ -1.28
HDLBP-228ENST00000459788 MRPL32Q9BYC8 188 aaKnown RBP7.08□□□□□ -1.28
HDLBP-228ENST00000459788 TRAV12-2A0A075B6T6 113 aa7.07□□□□□ -1.28
HDLBP-228ENST00000459788 TRBV7-9A0A0J9YWB2 115 aa7.07□□□□□ -1.28
HDLBP-228ENST00000459788 C17orf112F2Z3M2 114 aa7.07□□□□□ -1.28
HDLBP-228ENST00000459788 SLC17A3O00476 420 aa7.07□□□□□ -1.28
HDLBP-228ENST00000459788 SLC25A5P05141 298 aaKnown RBP7.07□□□□□ -1.28
HDLBP-228ENST00000459788 MORN5Q5VZ52 161 aa7.07□□□□□ -1.28
HDLBP-228ENST00000459788 LINC00612Q8N6U2 182 aa7.07□□□□□ -1.28
HDLBP-228ENST00000459788 OR5C1Q8NGR4 320 aa7.07□□□□□ -1.28
HDLBP-228ENST00000459788 ZNF503Q96F45 646 aa7.07□□□□□ -1.28
HDLBP-228ENST00000459788 PYGO2Q9BRQ0 406 aa7.07□□□□□ -1.28
HDLBP-228ENST00000459788 LINC00467Q9BRT7 94 aa7.07□□□□□ -1.28
HDLBP-228ENST00000459788 AAMDCQ9H7C9 122 aa7.07□□□□□ -1.28
HDLBP-228ENST00000459788 BATF3Q9NR55 127 aa7.07□□□□□ -1.28
HDLBP-228ENST00000459788 ZNF586Q9NXT0 402 aa7.07□□□□□ -1.28
HDLBP-228ENST00000459788 MUC4Q99102 2169 aa7.07□□□□□ -1.28
HDLBP-228ENST00000459788 NHLH2Q02577 135 aa7.06□□□□□ -1.28
HDLBP-228ENST00000459788 GFI1BQ5VTD9 330 aa7.06□□□□□ -1.28
HDLBP-228ENST00000459788 TMEM88Q6PEY1 159 aa7.06□□□□□ -1.28
HDLBP-228ENST00000459788 Q6ZR54 194 aa7.06□□□□□ -1.28
HDLBP-228ENST00000459788 C9orf47Q6ZRZ4 202 aa7.06□□□□□ -1.28
HDLBP-228ENST00000459788 UBE2DNLQ8IWF7 75 aa7.06□□□□□ -1.28
HDLBP-228ENST00000459788 LYPD1Q8N2G4 141 aa7.06□□□□□ -1.28
HDLBP-228ENST00000459788 TIMM9Q9Y5J7 89 aa7.06□□□□□ -1.28
HDLBP-228ENST00000459788 TRAV5A0A0B4J249 113 aa7.05□□□□□ -1.28
HDLBP-228ENST00000459788 PRAC2D3DTV9 90 aa7.05□□□□□ -1.28
HDLBP-228ENST00000459788 H3BNG1 76 aa7.05□□□□□ -1.28
HDLBP-228ENST00000459788 CT45A10P0DMU9 189 aa7.05□□□□□ -1.28
HDLBP-228ENST00000459788 HTN3P15516 51 aa7.05□□□□□ -1.28
HDLBP-228ENST00000459788 CRISP2P16562 243 aa7.05□□□□□ -1.28
HDLBP-228ENST00000459788 AZU1P20160 251 aa7.05□□□□□ -1.28
HDLBP-228ENST00000459788 IFITM3Q01628 133 aa7.05□□□□□ -1.28
HDLBP-228ENST00000459788 DAZ2Q13117 558 aaKnown RBP7.05□□□□□ -1.28
HDLBP-228ENST00000459788 SOHLH1Q5JUK2 328 aa7.05□□□□□ -1.28
HDLBP-228ENST00000459788 ZNF680Q8NEM1 530 aa7.05□□□□□ -1.28
HDLBP-228ENST00000459788 PPP1R1CQ8WVI7 109 aa7.05□□□□□ -1.28
HDLBP-228ENST00000459788 FAM19A4Q96LR4 140 aa7.05□□□□□ -1.28
HDLBP-228ENST00000459788 C18orf15Q96N68 181 aa7.05□□□□□ -1.28
HDLBP-228ENST00000459788 PARD6GQ9BYG4 376 aaPredicted RBP7.05□□□□□ -1.28
HDLBP-228ENST00000459788 WDR61Q9GZS3 305 aaKnown RBP7.05□□□□□ -1.28
HDLBP-228ENST00000459788 FAT2Q9NYQ8 4349 aa7.04□□□□□ -1.28
HDLBP-228ENST00000459788 DNAH2Q9P225 4427 aa7.04□□□□□ -1.28
HDLBP-228ENST00000459788 RBAKDNA6NC62 111 aa7.04□□□□□ -1.28
HDLBP-228ENST00000459788 SNURFLB1AK76 121 aa7.04□□□□□ -1.28
HDLBP-228ENST00000459788 KLLNB2CW77 178 aa7.04□□□□□ -1.28
HDLBP-228ENST00000459788 NDUFB4O95168 129 aa7.04□□□□□ -1.28
HDLBP-228ENST00000459788 NBEAP1P0C6P0 100 aa7.04□□□□□ -1.28
HDLBP-228ENST00000459788 DEFB130BP0DP73 79 aa7.04□□□□□ -1.28
HDLBP-228ENST00000459788 DEFB130AP0DP74 79 aa7.04□□□□□ -1.28
HDLBP-228ENST00000459788 ANXA2RQ3ZCQ2 193 aa7.04□□□□□ -1.28
HDLBP-228ENST00000459788 ARL6IP6Q8N6S5 226 aa7.04□□□□□ -1.28
HDLBP-228ENST00000459788 FAM167A-AS1Q96KT0 104 aa7.04□□□□□ -1.28
HDLBP-228ENST00000459788 ATP5SQ99766 215 aa7.04□□□□□ -1.28
HDLBP-228ENST00000459788 OR51M1Q9H341 326 aa7.04□□□□□ -1.28
HDLBP-228ENST00000459788 PLA2G2EQ9NZK7 142 aa7.04□□□□□ -1.28
HDLBP-228ENST00000459788 OR5AC2Q9NZP5 309 aa7.04□□□□□ -1.28
HDLBP-228ENST00000459788 FUT9Q9Y231 359 aa7.04□□□□□ -1.28
HDLBP-228ENST00000459788 C7orf71A4D174 169 aa7.03□□□□□ -1.28
HDLBP-228ENST00000459788 F5H768 121 aa7.03□□□□□ -1.28
HDLBP-228ENST00000459788 H0YIZ8 118 aa7.03□□□□□ -1.28
HDLBP-228ENST00000459788 SSNA1O43805 119 aa7.03□□□□□ -1.28
HDLBP-228ENST00000459788 SIX6O95475 246 aa7.03□□□□□ -1.28
HDLBP-228ENST00000459788 MPC2O95563 127 aa7.03□□□□□ -1.28
HDLBP-228ENST00000459788 CCL18P55774 89 aa7.03□□□□□ -1.28
HDLBP-228ENST00000459788 H2BFSP57053 126 aa7.03□□□□□ -1.28
HDLBP-228ENST00000459788 SLC25A2Q9BXI2 301 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms