RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 EXOC3-AS1Q8N2X6 119 aa4.47□□□□□ -1.69
RNU1-88P-201ENST00000459274 CLRN3Q8NCR9 226 aa4.47□□□□□ -1.69
RNU1-88P-201ENST00000459274 OR2K2Q8NGT1 345 aa4.47□□□□□ -1.69
RNU1-88P-201ENST00000459274 LINC00477Q96M19 166 aa4.47□□□□□ -1.69
RNU1-88P-201ENST00000459274 ZNF331Q9NQX6 463 aaPredicted RBP4.47□□□□□ -1.69
RNU1-88P-201ENST00000459274 SMCO4Q9NRQ5 59 aa4.47□□□□□ -1.69
RNU1-88P-201ENST00000459274 YTHDF2Q9Y5A9 579 aaKnown RBP4.47□□□□□ -1.69
RNU1-88P-201ENST00000459274 DCHS2Q6V1P9 2916 aa4.47□□□□□ -1.69
RNU1-88P-201ENST00000459274 SPENQ96T58 3664 aaKnown RBP4.47□□□□□ -1.69
RNU1-88P-201ENST00000459274 TENM4Q6N022 2769 aa4.46□□□□□ -1.7
RNU1-88P-201ENST00000459274 TRAV2A0A0B4J234 112 aa4.46□□□□□ -1.7
RNU1-88P-201ENST00000459274 CXorf65A6NEN9 183 aa4.46□□□□□ -1.7
RNU1-88P-201ENST00000459274 ZNF705GA8MUZ8 300 aaPredicted RBP4.46□□□□□ -1.7
RNU1-88P-201ENST00000459274 DIRC3C9JPN6 131 aa4.46□□□□□ -1.7
RNU1-88P-201ENST00000459274 H3BTX0 84 aa4.46□□□□□ -1.7
RNU1-88P-201ENST00000459274 H7BYZ3 331 aa4.46□□□□□ -1.7
RNU1-88P-201ENST00000459274 TFPI2P48307 235 aa4.46□□□□□ -1.7
RNU1-88P-201ENST00000459274 SRSF3P84103 164 aaKnown RBP4.46□□□□□ -1.7
RNU1-88P-201ENST00000459274 SHISA2Q6UWI4 295 aa4.46□□□□□ -1.7
RNU1-88P-201ENST00000459274 GTSCR1Q86UQ5 136 aa4.46□□□□□ -1.7
RNU1-88P-201ENST00000459274 GBGT1Q8N5D6 347 aa4.46□□□□□ -1.7
RNU1-88P-201ENST00000459274 TMEM75Q8N9X5 138 aa4.46□□□□□ -1.7
RNU1-88P-201ENST00000459274 OR10G8Q8NGN5 311 aa4.46□□□□□ -1.7
RNU1-88P-201ENST00000459274 GLMPQ8WWB7 406 aa4.46□□□□□ -1.7
RNU1-88P-201ENST00000459274 DLX4Q92988 240 aaPredicted RBP4.46□□□□□ -1.7
RNU1-88P-201ENST00000459274 C11orf52Q96A22 123 aa4.46□□□□□ -1.7
RNU1-88P-201ENST00000459274 ZNF503Q96F45 646 aa4.46□□□□□ -1.7
RNU1-88P-201ENST00000459274 RAX2Q96IS3 184 aa4.46□□□□□ -1.7
RNU1-88P-201ENST00000459274 ASCL2Q99929 193 aa4.46□□□□□ -1.7
RNU1-88P-201ENST00000459274 SPAG8Q99932 426 aaPredicted RBP4.46□□□□□ -1.7
RNU1-88P-201ENST00000459274 KRTAP4-5Q9BYR2 181 aa4.46□□□□□ -1.7
RNU1-88P-201ENST00000459274 SDF2L1Q9HCN8 221 aa4.46□□□□□ -1.7
RNU1-88P-201ENST00000459274 U3KQE9 123 aa4.46□□□□□ -1.7
RNU1-88P-201ENST00000459274 CENPEQ02224 2701 aa4.46□□□□□ -1.7
RNU1-88P-201ENST00000459274 FLNAP21333 2647 aaKnown RBP4.46□□□□□ -1.7
RNU1-88P-201ENST00000459274 A0A087WWC5 75 aa4.45□□□□□ -1.7
RNU1-88P-201ENST00000459274 C7orf77A4D0Y5 90 aa4.45□□□□□ -1.7
RNU1-88P-201ENST00000459274 GGTLC3B5MD39 225 aa4.45□□□□□ -1.7
RNU1-88P-201ENST00000459274 GATCO43716 136 aaKnown RBP4.45□□□□□ -1.7
RNU1-88P-201ENST00000459274 P01737 135 aa4.45□□□□□ -1.7
RNU1-88P-201ENST00000459274 APOHP02749 345 aaPredicted RBP4.45□□□□□ -1.7
RNU1-88P-201ENST00000459274 GPX1P07203 203 aa4.45□□□□□ -1.7
RNU1-88P-201ENST00000459274 LEPP41159 167 aa4.45□□□□□ -1.7
RNU1-88P-201ENST00000459274 RPS20P60866 119 aaKnown RBP4.45□□□□□ -1.7
RNU1-88P-201ENST00000459274 SMUG1Q53HV7 270 aa4.45□□□□□ -1.7
RNU1-88P-201ENST00000459274 AWAT1Q58HT5 328 aa4.45□□□□□ -1.7
RNU1-88P-201ENST00000459274 CENPWQ5EE01 88 aa4.45□□□□□ -1.7
RNU1-88P-201ENST00000459274 C10orf91Q5T1B1 145 aa4.45□□□□□ -1.7
RNU1-88P-201ENST00000459274 IBA57Q5T440 356 aaKnown RBP4.45□□□□□ -1.7
RNU1-88P-201ENST00000459274 C9orf66Q5T8R8 295 aa4.45□□□□□ -1.7
RNU1-88P-201ENST00000459274 FAM90A2PQ658T7 463 aa4.45□□□□□ -1.7
RNU1-88P-201ENST00000459274 PRR27Q6MZM9 219 aa4.45□□□□□ -1.7
RNU1-88P-201ENST00000459274 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.45□□□□□ -1.7
RNU1-88P-201ENST00000459274 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.45□□□□□ -1.7
RNU1-88P-201ENST00000459274 DUX3Q96PT4 197 aa4.45□□□□□ -1.7
RNU1-88P-201ENST00000459274 MS4A6AQ9H2W1 248 aa4.45□□□□□ -1.7
RNU1-88P-201ENST00000459274 TMEM242Q9NWH2 141 aa4.45□□□□□ -1.7
RNU1-88P-201ENST00000459274 SIGLEC8Q9NYZ4 499 aa4.45□□□□□ -1.7
RNU1-88P-201ENST00000459274 PSG8Q9UQ74 426 aa4.45□□□□□ -1.7
RNU1-88P-201ENST00000459274 LENEPQ9Y5L5 61 aa4.45□□□□□ -1.7
RNU1-88P-201ENST00000459274 TEX15Q9BXT5 2789 aa4.45□□□□□ -1.7
RNU1-88P-201ENST00000459274 CELSR2Q9HCU4 2923 aa4.45□□□□□ -1.7
RNU1-88P-201ENST00000459274 TRAV34A0A0B4J273 112 aa4.44□□□□□ -1.7
RNU1-88P-201ENST00000459274 TMEM213A2RRL7 107 aa4.44□□□□□ -1.7
RNU1-88P-201ENST00000459274 FABP5P3A8MUU1 101 aa4.44□□□□□ -1.7
RNU1-88P-201ENST00000459274 A8MWL6 223 aa4.44□□□□□ -1.7
RNU1-88P-201ENST00000459274 S100A8P05109 93 aa4.44□□□□□ -1.7
RNU1-88P-201ENST00000459274 ZNF138P52744 262 aa4.44□□□□□ -1.7
RNU1-88P-201ENST00000459274 RPL23P62829 140 aaKnown RBP4.44□□□□□ -1.7
RNU1-88P-201ENST00000459274 GNG5P63218 68 aa4.44□□□□□ -1.7
RNU1-88P-201ENST00000459274 HIST1H1AQ02539 215 aaPredicted RBP4.44□□□□□ -1.7
RNU1-88P-201ENST00000459274 BTN1A1Q13410 526 aa4.44□□□□□ -1.7
RNU1-88P-201ENST00000459274 OR5I1Q13606 314 aa4.44□□□□□ -1.7
RNU1-88P-201ENST00000459274 COX19Q49B96 90 aa4.44□□□□□ -1.7
RNU1-88P-201ENST00000459274 PSMG4Q5JS54 123 aa4.44□□□□□ -1.7
RNU1-88P-201ENST00000459274 FAM162BQ5T6X4 162 aa4.44□□□□□ -1.7
RNU1-88P-201ENST00000459274 STHQ8IWL8 128 aa4.44□□□□□ -1.7
RNU1-88P-201ENST00000459274 TMEM183AQ8IXX5 376 aa4.44□□□□□ -1.7
RNU1-88P-201ENST00000459274 OR4B1Q8NGF8 309 aa4.44□□□□□ -1.7
RNU1-88P-201ENST00000459274 OCC1Q8TAD7 63 aa4.44□□□□□ -1.7
RNU1-88P-201ENST00000459274 SFRP2Q96HF1 295 aa4.44□□□□□ -1.7
RNU1-88P-201ENST00000459274 C17orf77Q96MU5 243 aa4.44□□□□□ -1.7
RNU1-88P-201ENST00000459274 KLF12Q9Y4X4 402 aa4.44□□□□□ -1.7
RNU1-88P-201ENST00000459274 SONP18583 2426 aaKnown RBP4.44□□□□□ -1.7
RNU1-88P-201ENST00000459274 HECTD1Q9ULT8 2610 aa4.43□□□□□ -1.7
RNU1-88P-201ENST00000459274 ACANP16112 2415 aa4.43□□□□□ -1.7
RNU1-88P-201ENST00000459274 TRBV6-1A0A0K0K1D8 114 aa4.43□□□□□ -1.7
RNU1-88P-201ENST00000459274 TMEM189A5PLL7 270 aa4.43□□□□□ -1.7
RNU1-88P-201ENST00000459274 OR11H12B2RN74 326 aa4.43□□□□□ -1.7
RNU1-88P-201ENST00000459274 SLC17A3O00476 420 aa4.43□□□□□ -1.7
RNU1-88P-201ENST00000459274 MRPS12O15235 138 aaKnown RBP4.43□□□□□ -1.7
RNU1-88P-201ENST00000459274 LTAP01374 205 aa4.43□□□□□ -1.7
RNU1-88P-201ENST00000459274 ORM1P02763 201 aa4.43□□□□□ -1.7
RNU1-88P-201ENST00000459274 CSN3P07498 182 aa4.43□□□□□ -1.7
RNU1-88P-201ENST00000459274 ZNF688P0C7X2 276 aa4.43□□□□□ -1.7
RNU1-88P-201ENST00000459274 DEFB114Q30KQ6 69 aa4.43□□□□□ -1.7
RNU1-88P-201ENST00000459274 LCE2CQ5TA81 110 aa4.43□□□□□ -1.7
RNU1-88P-201ENST00000459274 SMIM15Q7Z3B0 74 aa4.43□□□□□ -1.7
RNU1-88P-201ENST00000459274 LINC01551Q86U37 167 aa4.43□□□□□ -1.7
RNU1-88P-201ENST00000459274 RNF182Q8N6D2 247 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms