RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 A0A096LNJ9 63 aa11.07□□□□□ -0.64
SCFD1-203ENST00000458591 WI2-2373I1.2A0A1W2PRP0 233 aa11.07□□□□□ -0.64
SCFD1-203ENST00000458591 CBY3A6NI87 242 aa11.07□□□□□ -0.64
SCFD1-203ENST00000458591 NCBP2LA6PVI3 153 aaKnown RBP11.07□□□□□ -0.64
SCFD1-203ENST00000458591 D6R8Y8 96 aa11.07□□□□□ -0.64
SCFD1-203ENST00000458591 K7EQM0 130 aa11.07□□□□□ -0.64
SCFD1-203ENST00000458591 CD5LO43866 347 aa11.07□□□□□ -0.64
SCFD1-203ENST00000458591 CSN1S1P47710 185 aa11.07□□□□□ -0.64
SCFD1-203ENST00000458591 FOXC1Q12948 553 aa11.07□□□□□ -0.64
SCFD1-203ENST00000458591 FA2HQ7L5A8 372 aa11.07□□□□□ -0.64
SCFD1-203ENST00000458591 PRSS3P2Q8NHM4 247 aa11.07□□□□□ -0.64
SCFD1-203ENST00000458591 DPM3Q9P2X0 92 aa11.07□□□□□ -0.64
SCFD1-203ENST00000458591 ATRXP46100 2492 aa11.07□□□□□ -0.64
SCFD1-203ENST00000458591 OR2T8A6NH00 312 aa11.06□□□□□ -0.64
SCFD1-203ENST00000458591 ZNF80P51504 273 aaPredicted RBP11.06□□□□□ -0.64
SCFD1-203ENST00000458591 PIP4P2Q8N4L2 257 aa11.06□□□□□ -0.64
SCFD1-203ENST00000458591 ARL6IP6Q8N6S5 226 aa11.06□□□□□ -0.64
SCFD1-203ENST00000458591 RNF24Q9Y225 148 aa11.06□□□□□ -0.64
SCFD1-203ENST00000458591 CACNA1BQ00975 2339 aa11.06□□□□□ -0.64
SCFD1-203ENST00000458591 SH2D1AO60880 128 aa11.06□□□□□ -0.64
SCFD1-203ENST00000458591 GPR183P32249 361 aa11.06□□□□□ -0.64
SCFD1-203ENST00000458591 Q6AWC8 147 aa11.06□□□□□ -0.64
SCFD1-203ENST00000458591 WFDC3Q8IUB2 231 aa11.06□□□□□ -0.64
SCFD1-203ENST00000458591 OR8A1Q8NGG7 326 aa11.06□□□□□ -0.64
SCFD1-203ENST00000458591 OR10AG1Q8NH19 301 aa11.06□□□□□ -0.64
SCFD1-203ENST00000458591 ZNF747Q9BV97 191 aa11.06□□□□□ -0.64
SCFD1-203ENST00000458591 SELENOKQ9Y6D0 94 aa11.06□□□□□ -0.64
SCFD1-203ENST00000458591 PPBPP02775 128 aa11.05□□□□□ -0.64
SCFD1-203ENST00000458591 COX8AP10176 69 aa11.05□□□□□ -0.64
SCFD1-203ENST00000458591 GATD1Q8NB37 220 aa11.05□□□□□ -0.64
SCFD1-203ENST00000458591 LY6G5BQ8NDX9 201 aa11.05□□□□□ -0.64
SCFD1-203ENST00000458591 PEF1Q9UBV8 284 aaKnown RBP11.05□□□□□ -0.64
SCFD1-203ENST00000458591 PTPRQQ9UMZ3 2332 aa11.05□□□□□ -0.64
SCFD1-203ENST00000458591 GAS8-AS1O95177 125 aa11.05□□□□□ -0.64
SCFD1-203ENST00000458591 C5orf64Q2M2E5 130 aa11.05□□□□□ -0.64
SCFD1-203ENST00000458591 VGLL1Q99990 258 aa11.05□□□□□ -0.64
SCFD1-203ENST00000458591 CST9LQ9H4G1 147 aa11.05□□□□□ -0.64
SCFD1-203ENST00000458591 SIGLEC8Q9NYZ4 499 aa11.05□□□□□ -0.64
SCFD1-203ENST00000458591 AMMECR1LQ6DCA0 310 aa11.04□□□□□ -0.64
SCFD1-203ENST00000458591 MSRB1Q9NZV6 116 aa11.04□□□□□ -0.64
SCFD1-203ENST00000458591 SMAD5-AS1Q9Y6J3 95 aa11.04□□□□□ -0.64
SCFD1-203ENST00000458591 IGLV11-55A0A075B6I3 123 aa11.04□□□□□ -0.64
SCFD1-203ENST00000458591 TMEM189A5PLL7 270 aa11.04□□□□□ -0.64
SCFD1-203ENST00000458591 NPIPB5A8MRT5 1133 aa11.04□□□□□ -0.64
SCFD1-203ENST00000458591 EGR2P11161 476 aaPredicted RBP11.04□□□□□ -0.64
SCFD1-203ENST00000458591 VKORC1Q9BQB6 163 aa11.04□□□□□ -0.64
SCFD1-203ENST00000458591 NDUFA3O95167 84 aa11.03□□□□□ -0.64
SCFD1-203ENST00000458591 SEC11AP67812 179 aa11.03□□□□□ -0.64
SCFD1-203ENST00000458591 ZNF575Q86XF7 245 aa11.03□□□□□ -0.64
SCFD1-203ENST00000458591 WNK2Q9Y3S1 2297 aa11.03□□□□□ -0.64
SCFD1-203ENST00000458591 IGHV3OR16-13A0A075B7E8 117 aa11.03□□□□□ -0.64
SCFD1-203ENST00000458591 IGHV3-74A0A0B4J1X5 117 aa11.03□□□□□ -0.64
SCFD1-203ENST00000458591 IGHV3-66A0A0C4DH42 116 aa11.03□□□□□ -0.64
SCFD1-203ENST00000458591 IGHG4P01861 327 aa11.03□□□□□ -0.64
SCFD1-203ENST00000458591 PSG9Q00887 426 aa11.03□□□□□ -0.64
SCFD1-203ENST00000458591 OCIAD2Q56VL3 154 aa11.03□□□□□ -0.64
SCFD1-203ENST00000458591 LYPD1Q8N2G4 141 aa11.03□□□□□ -0.64
SCFD1-203ENST00000458591 NPBQ8NG41 125 aa11.03□□□□□ -0.64
SCFD1-203ENST00000458591 RNF5Q99942 180 aa11.03□□□□□ -0.64
SCFD1-203ENST00000458591 VPS25Q9BRG1 176 aa11.03□□□□□ -0.64
SCFD1-203ENST00000458591 AAMDCQ9H7C9 122 aa11.03□□□□□ -0.64
SCFD1-203ENST00000458591 IGF2RP11717 2491 aa11.02□□□□□ -0.64
SCFD1-203ENST00000458591 CCL21O00585 134 aa11.02□□□□□ -0.65
SCFD1-203ENST00000458591 NDUFS7O75251 213 aa11.02□□□□□ -0.65
SCFD1-203ENST00000458591 CT45A10P0DMU9 189 aa11.02□□□□□ -0.65
SCFD1-203ENST00000458591 PPIFP30405 207 aaKnown RBP11.02□□□□□ -0.65
SCFD1-203ENST00000458591 MFAP4P55083 255 aa11.02□□□□□ -0.65
SCFD1-203ENST00000458591 ERCC8Q13216 396 aa11.02□□□□□ -0.65
SCFD1-203ENST00000458591 MRPL51Q4U2R6 128 aaKnown RBP11.02□□□□□ -0.65
SCFD1-203ENST00000458591 C2orf91Q6ZV80 131 aa11.02□□□□□ -0.65
SCFD1-203ENST00000458591 OR11H6Q8NGC7 330 aa11.02□□□□□ -0.65
SCFD1-203ENST00000458591 ARPC1AQ92747 370 aa11.02□□□□□ -0.65
SCFD1-203ENST00000458591 DPF1Q92782 380 aa11.02□□□□□ -0.65
SCFD1-203ENST00000458591 VPS13CQ709C8 3753 aa11.02□□□□□ -0.65
SCFD1-203ENST00000458591 SMIM15Q7Z3B0 74 aa11.02□□□□□ -0.65
SCFD1-203ENST00000458591 PRELID3AQ96N28 172 aa11.02□□□□□ -0.65
SCFD1-203ENST00000458591 C21orf62Q9NYP8 219 aa11.02□□□□□ -0.65
SCFD1-203ENST00000458591 C7orf71A4D174 169 aa11.01□□□□□ -0.65
SCFD1-203ENST00000458591 PRAC2D3DTV9 90 aa11.01□□□□□ -0.65
SCFD1-203ENST00000458591 FAM104BQ5XKR9 115 aa11.01□□□□□ -0.65
SCFD1-203ENST00000458591 NPYP01303 97 aa11.01□□□□□ -0.65
SCFD1-203ENST00000458591 CTSGP08311 255 aa11.01□□□□□ -0.65
SCFD1-203ENST00000458591 ZFP36P26651 326 aaKnown RBP11.01□□□□□ -0.65
SCFD1-203ENST00000458591 TMEM97Q5BJF2 176 aa11.01□□□□□ -0.65
SCFD1-203ENST00000458591 PRR25Q96S07 402 aa11.01□□□□□ -0.65
SCFD1-203ENST00000458591 CELSR1Q9NYQ6 3014 aa11□□□□□ -0.65
SCFD1-203ENST00000458591 ODF3BA8MYP8 253 aa11□□□□□ -0.65
SCFD1-203ENST00000458591 UQCRFS1P47985 274 aa11□□□□□ -0.65
SCFD1-203ENST00000458591 TWIST1Q15672 202 aa11□□□□□ -0.65
SCFD1-203ENST00000458591 ZNF493Q6ZR52 646 aa11□□□□□ -0.65
SCFD1-203ENST00000458591 VMO1Q7Z5L0 202 aa11□□□□□ -0.65
SCFD1-203ENST00000458591 RNF182Q8N6D2 247 aa11□□□□□ -0.65
SCFD1-203ENST00000458591 OR1N2Q8NGR9 330 aa11□□□□□ -0.65
SCFD1-203ENST00000458591 IGHV3-49A0A0A0MS15 119 aa10.99□□□□□ -0.65
SCFD1-203ENST00000458591 K7ERU9 68 aa10.99□□□□□ -0.65
SCFD1-203ENST00000458591 CACNG7P62955 275 aa10.99□□□□□ -0.65
SCFD1-203ENST00000458591 NHLH1Q02575 133 aa10.99□□□□□ -0.65
SCFD1-203ENST00000458591 ZNF562Q6V9R5 426 aa10.99□□□□□ -0.65
SCFD1-203ENST00000458591 S100A7AQ86SG5 101 aa10.99□□□□□ -0.65
SCFD1-203ENST00000458591 AP1S3Q96PC3 154 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms