RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 GNG4P50150 75 aa6.78□□□□□ -1.32
CDC42EP3-204ENST00000457889 UBE2G1P62253 170 aa6.78□□□□□ -1.32
CDC42EP3-204ENST00000457889 TM4SF20Q53R12 229 aa6.78□□□□□ -1.32
CDC42EP3-204ENST00000457889 AWAT1Q58HT5 328 aa6.78□□□□□ -1.32
CDC42EP3-204ENST00000457889 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.78□□□□□ -1.32
CDC42EP3-204ENST00000457889 TMEM75Q8N9X5 138 aa6.78□□□□□ -1.32
CDC42EP3-204ENST00000457889 OR9G4Q8NGQ1 327 aa6.78□□□□□ -1.32
CDC42EP3-204ENST00000457889 CITED2Q99967 270 aaPredicted RBP6.78□□□□□ -1.32
CDC42EP3-204ENST00000457889 TMEM242Q9NWH2 141 aa6.78□□□□□ -1.32
CDC42EP3-204ENST00000457889 MLXQ9UH92 298 aa6.78□□□□□ -1.32
CDC42EP3-204ENST00000457889 SMAD5-AS1Q9Y6J3 95 aa6.78□□□□□ -1.32
CDC42EP3-204ENST00000457889 JMJD1CQ15652 2540 aa6.78□□□□□ -1.32
CDC42EP3-204ENST00000457889 CXorf65A6NEN9 183 aa6.77□□□□□ -1.33
CDC42EP3-204ENST00000457889 SLC17A3O00476 420 aa6.77□□□□□ -1.33
CDC42EP3-204ENST00000457889 PPP1R2P9O14990 202 aa6.77□□□□□ -1.33
CDC42EP3-204ENST00000457889 APOHP02749 345 aaPredicted RBP6.77□□□□□ -1.33
CDC42EP3-204ENST00000457889 MT-ND4LP03901 98 aa6.77□□□□□ -1.33
CDC42EP3-204ENST00000457889 CBLN1P23435 193 aa6.77□□□□□ -1.33
CDC42EP3-204ENST00000457889 ID1P41134 155 aa6.77□□□□□ -1.33
CDC42EP3-204ENST00000457889 LINC01551Q86U37 167 aa6.77□□□□□ -1.33
CDC42EP3-204ENST00000457889 RAX2Q96IS3 184 aa6.77□□□□□ -1.33
CDC42EP3-204ENST00000457889 CTDSP1Q9GZU7 261 aa6.77□□□□□ -1.33
CDC42EP3-204ENST00000457889 ZFP30Q9Y2G7 519 aa6.77□□□□□ -1.33
CDC42EP3-204ENST00000457889 TRBV20OR9-2A0A075B6H5 130 aa6.76□□□□□ -1.33
CDC42EP3-204ENST00000457889 IGHV3OR16-13A0A075B7E8 117 aa6.76□□□□□ -1.33
CDC42EP3-204ENST00000457889 IGHV3-49A0A0A0MS15 119 aa6.76□□□□□ -1.33
CDC42EP3-204ENST00000457889 IGHV3-74A0A0B4J1X5 117 aa6.76□□□□□ -1.33
CDC42EP3-204ENST00000457889 TRAV25A0A0B4J276 109 aa6.76□□□□□ -1.33
CDC42EP3-204ENST00000457889 IGHV3-66A0A0C4DH42 116 aa6.76□□□□□ -1.33
CDC42EP3-204ENST00000457889 C7orf77A4D0Y5 90 aa6.76□□□□□ -1.33
CDC42EP3-204ENST00000457889 DIRC3C9JPN6 131 aa6.76□□□□□ -1.33
CDC42EP3-204ENST00000457889 SOCS3O14543 225 aa6.76□□□□□ -1.33
CDC42EP3-204ENST00000457889 TSPAN4O14817 238 aa6.76□□□□□ -1.33
CDC42EP3-204ENST00000457889 LTAP01374 205 aa6.76□□□□□ -1.33
CDC42EP3-204ENST00000457889 FOLR2P14207 255 aa6.76□□□□□ -1.33
CDC42EP3-204ENST00000457889 SLURP1P55000 103 aa6.76□□□□□ -1.33
CDC42EP3-204ENST00000457889 RPL23P62829 140 aaKnown RBP6.76□□□□□ -1.33
CDC42EP3-204ENST00000457889 PAFAH1B2P68402 229 aa6.76□□□□□ -1.33
CDC42EP3-204ENST00000457889 ADIRFQ15847 76 aa6.76□□□□□ -1.33
CDC42EP3-204ENST00000457889 DEFB136Q30KP8 78 aa6.76□□□□□ -1.33
CDC42EP3-204ENST00000457889 CENPWQ5EE01 88 aa6.76□□□□□ -1.33
CDC42EP3-204ENST00000457889 TCF24Q7RTU0 167 aa6.76□□□□□ -1.33
CDC42EP3-204ENST00000457889 EXOC3-AS1Q8N2X6 119 aa6.76□□□□□ -1.33
CDC42EP3-204ENST00000457889 ANAPC16Q96DE5 110 aa6.76□□□□□ -1.33
CDC42EP3-204ENST00000457889 C16orf92Q96LL3 132 aa6.76□□□□□ -1.33
CDC42EP3-204ENST00000457889 IGF2BP2-AS1Q96M15 143 aa6.76□□□□□ -1.33
CDC42EP3-204ENST00000457889 C17orf77Q96MU5 243 aa6.76□□□□□ -1.33
CDC42EP3-204ENST00000457889 DERL1Q9BUN8 251 aa6.76□□□□□ -1.33
CDC42EP3-204ENST00000457889 SSBP4Q9BWG4 385 aaPredicted RBP6.76□□□□□ -1.33
CDC42EP3-204ENST00000457889 TUBA4BQ9H853 241 aa6.76□□□□□ -1.33
CDC42EP3-204ENST00000457889 SMCO4Q9NRQ5 59 aa6.76□□□□□ -1.33
CDC42EP3-204ENST00000457889 NIPBLQ6KC79 2804 aaeCLIP6.76□□□□□ -1.33
CDC42EP3-204ENST00000457889 ZFHX3Q15911 3703 aa6.75□□□□□ -1.33
CDC42EP3-204ENST00000457889 H3BTX0 84 aa6.75□□□□□ -1.33
CDC42EP3-204ENST00000457889 SNRPD3P62318 126 aaKnown RBP6.75□□□□□ -1.33
CDC42EP3-204ENST00000457889 RPL11P62913 178 aaKnown RBP6.75□□□□□ -1.33
CDC42EP3-204ENST00000457889 GNG5P63218 68 aa6.75□□□□□ -1.33
CDC42EP3-204ENST00000457889 PSG3Q16557 428 aa6.75□□□□□ -1.33
CDC42EP3-204ENST00000457889 SAPCD1Q5SSQ6 148 aa6.75□□□□□ -1.33
CDC42EP3-204ENST00000457889 LCN12Q6JVE5 192 aa6.75□□□□□ -1.33
CDC42EP3-204ENST00000457889 C18orf65Q6ZTR6 163 aa6.75□□□□□ -1.33
CDC42EP3-204ENST00000457889 GOLT1AQ6ZVE7 132 aa6.75□□□□□ -1.33
CDC42EP3-204ENST00000457889 Q86TA4 180 aa6.75□□□□□ -1.33
CDC42EP3-204ENST00000457889 BAGE2Q86Y30 109 aa6.75□□□□□ -1.33
CDC42EP3-204ENST00000457889 ISOC2Q96AB3 205 aa6.75□□□□□ -1.33
CDC42EP3-204ENST00000457889 RPS10P5Q9NQ39 176 aa6.75□□□□□ -1.33
CDC42EP3-204ENST00000457889 PPP1R14DQ9NXH3 145 aa6.75□□□□□ -1.33
CDC42EP3-204ENST00000457889 LENEPQ9Y5L5 61 aa6.75□□□□□ -1.33
CDC42EP3-204ENST00000457889 TRBV7-9A0A0J9YWB2 115 aa6.74□□□□□ -1.33
CDC42EP3-204ENST00000457889 OVOL1O14753 267 aa6.74□□□□□ -1.33
CDC42EP3-204ENST00000457889 SNRPCP09234 159 aaKnown RBP6.74□□□□□ -1.33
CDC42EP3-204ENST00000457889 FLI1Q01543 452 aaPredicted RBP6.74□□□□□ -1.33
CDC42EP3-204ENST00000457889 COX8CQ7Z4L0 72 aa6.74□□□□□ -1.33
CDC42EP3-204ENST00000457889 TMEM183AQ8IXX5 376 aa6.74□□□□□ -1.33
CDC42EP3-204ENST00000457889 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.74□□□□□ -1.33
CDC42EP3-204ENST00000457889 C15orf54Q8N8G6 183 aa6.74□□□□□ -1.33
CDC42EP3-204ENST00000457889 OR2K2Q8NGT1 345 aa6.74□□□□□ -1.33
CDC42EP3-204ENST00000457889 DYNLRB2Q8TF09 96 aa6.74□□□□□ -1.33
CDC42EP3-204ENST00000457889 DCANP1Q8TF63 244 aa6.74□□□□□ -1.33
CDC42EP3-204ENST00000457889 DLX4Q92988 240 aaPredicted RBP6.74□□□□□ -1.33
CDC42EP3-204ENST00000457889 BTF3L4Q96K17 158 aa6.74□□□□□ -1.33
CDC42EP3-204ENST00000457889 NDFIP1Q9BT67 221 aa6.74□□□□□ -1.33
CDC42EP3-204ENST00000457889 TRAV8-2A0A0B4J237 113 aa6.73□□□□□ -1.33
CDC42EP3-204ENST00000457889 A0A1W2PRX2 142 aa6.73□□□□□ -1.33
CDC42EP3-204ENST00000457889 H7BYZ3 331 aa6.73□□□□□ -1.33
CDC42EP3-204ENST00000457889 M0R3E3 92 aa6.73□□□□□ -1.33
CDC42EP3-204ENST00000457889 DNASE2O00115 360 aaPredicted RBP6.73□□□□□ -1.33
CDC42EP3-204ENST00000457889 GCGP01275 180 aa6.73□□□□□ -1.33
CDC42EP3-204ENST00000457889 IGLV2-11P01706 119 aa6.73□□□□□ -1.33
CDC42EP3-204ENST00000457889 CSN3P07498 182 aa6.73□□□□□ -1.33
CDC42EP3-204ENST00000457889 ATRAIDQ6UW56 229 aa6.73□□□□□ -1.33
CDC42EP3-204ENST00000457889 RBPMS2Q6ZRY4 209 aaKnown RBP6.73□□□□□ -1.33
CDC42EP3-204ENST00000457889 FAM231DQ6ZW35 169 aa6.73□□□□□ -1.33
CDC42EP3-204ENST00000457889 C11orf44Q8N8P7 122 aa6.73□□□□□ -1.33
CDC42EP3-204ENST00000457889 OCC1Q8TAD7 63 aa6.73□□□□□ -1.33
CDC42EP3-204ENST00000457889 SFRP2Q96HF1 295 aa6.73□□□□□ -1.33
CDC42EP3-204ENST00000457889 IMMP2LQ96T52 175 aa6.73□□□□□ -1.33
CDC42EP3-204ENST00000457889 SPAG8Q99932 426 aaPredicted RBP6.73□□□□□ -1.33
CDC42EP3-204ENST00000457889 CITED1Q99966 193 aa6.73□□□□□ -1.33
CDC42EP3-204ENST00000457889 MLST8Q9BVC4 326 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms