RNA–Protein interactions for RNA: ENST00000457312.1

SF3B4-202, Transcript of splicing factor 3b subunit 4, humanhuman

TSL 5

Gene SF3B4, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-202ENST00000457312 SP6Q3SY56 376 aa10.06□□□□□ -0.8
SF3B4-202ENST00000457312 BPIFCQ8NFQ6 507 aa10.06□□□□□ -0.8
SF3B4-202ENST00000457312 U3KQ87 197 aa10.06□□□□□ -0.8
SF3B4-202ENST00000457312 TRAV4A0A0B4J268 109 aa10.05□□□□□ -0.8
SF3B4-202ENST00000457312 C3orf85A0A1B0GTC6 90 aa10.05□□□□□ -0.8
SF3B4-202ENST00000457312 MRPS12O15235 138 aaKnown RBP10.05□□□□□ -0.8
SF3B4-202ENST00000457312 MPDU1O75352 247 aa10.05□□□□□ -0.8
SF3B4-202ENST00000457312 CXCL2P19875 107 aa10.05□□□□□ -0.8
SF3B4-202ENST00000457312 PRR4Q16378 134 aa10.05□□□□□ -0.8
SF3B4-202ENST00000457312 GPR107Q5VW38 600 aa10.05□□□□□ -0.8
SF3B4-202ENST00000457312 LGI3Q8N145 548 aa10.05□□□□□ -0.8
SF3B4-202ENST00000457312 ARPC5LQ9BPX5 153 aa10.05□□□□□ -0.8
SF3B4-202ENST00000457312 SSR3Q9UNL2 185 aa10.05□□□□□ -0.8
SF3B4-202ENST00000457312 MUC17Q685J3 4493 aa10.04□□□□□ -0.8
SF3B4-202ENST00000457312 RGS13O14921 159 aa10.04□□□□□ -0.8
SF3B4-202ENST00000457312 GATA1P15976 413 aaPredicted RBP10.04□□□□□ -0.8
SF3B4-202ENST00000457312 PIGPP57054 158 aa10.04□□□□□ -0.8
SF3B4-202ENST00000457312 TSPAN5P62079 268 aa10.04□□□□□ -0.8
SF3B4-202ENST00000457312 C22orf42Q6IC83 251 aa10.04□□□□□ -0.8
SF3B4-202ENST00000457312 LCN15Q6UWW0 184 aa10.04□□□□□ -0.8
SF3B4-202ENST00000457312 DPPA3Q6W0C5 159 aa10.04□□□□□ -0.8
SF3B4-202ENST00000457312 RASL10AQ92737 203 aa10.04□□□□□ -0.8
SF3B4-202ENST00000457312 RNF185Q96GF1 192 aa10.04□□□□□ -0.8
SF3B4-202ENST00000457312 MGLLQ99685 303 aa10.04□□□□□ -0.8
SF3B4-202ENST00000457312 SLC50A1Q9BRV3 221 aa10.04□□□□□ -0.8
SF3B4-202ENST00000457312 GTSF1LQ9H1H1 148 aa10.04□□□□□ -0.8
SF3B4-202ENST00000457312 PMS2P5A8MQ11 134 aa10.03□□□□□ -0.8
SF3B4-202ENST00000457312 SLC17A3O00476 420 aa10.03□□□□□ -0.8
SF3B4-202ENST00000457312 PRSS1P07477 247 aa10.03□□□□□ -0.8
SF3B4-202ENST00000457312 CHTF8P0CG12 524 aa10.03□□□□□ -0.8
SF3B4-202ENST00000457312 PGAM2P15259 253 aa10.03□□□□□ -0.8
SF3B4-202ENST00000457312 HLA-DMAP28067 261 aa10.03□□□□□ -0.8
SF3B4-202ENST00000457312 DGAT2L7PQ6IED9 249 aa10.03□□□□□ -0.8
SF3B4-202ENST00000457312 ATRAIDQ6UW56 229 aa10.03□□□□□ -0.8
SF3B4-202ENST00000457312 Q6ZQT7 251 aa10.03□□□□□ -0.8
SF3B4-202ENST00000457312 LYSMD2Q8IV50 215 aa10.03□□□□□ -0.8
SF3B4-202ENST00000457312 DHRSXQ8N5I4 330 aa10.03□□□□□ -0.8
SF3B4-202ENST00000457312 IGHV1OR15-1A0A075B7D0 117 aa10.02□□□□□ -0.81
SF3B4-202ENST00000457312 IGHV3-16A0A0C4DH30 117 aa10.02□□□□□ -0.81
SF3B4-202ENST00000457312 TRDV1A0A1B0GX56 115 aa10.02□□□□□ -0.81
SF3B4-202ENST00000457312 SNRPCP09234 159 aaKnown RBP10.02□□□□□ -0.81
SF3B4-202ENST00000457312 RNASE4P34096 147 aaKnown RBP10.02□□□□□ -0.81
SF3B4-202ENST00000457312 VWC2Q2TAL6 325 aa10.02□□□□□ -0.81
SF3B4-202ENST00000457312 OR1S1Q8NH92 325 aa10.02□□□□□ -0.81
SF3B4-202ENST00000457312 LHFPL5Q8TAF8 219 aa10.02□□□□□ -0.81
SF3B4-202ENST00000457312 SPACA4Q8TDM5 124 aa10.02□□□□□ -0.81
SF3B4-202ENST00000457312 TMEM222Q9H0R3 208 aa10.02□□□□□ -0.81
SF3B4-202ENST00000457312 PLAC8Q9NZF1 115 aa10.02□□□□□ -0.81
SF3B4-202ENST00000457312 HIGD1AQ9Y241 93 aa10.02□□□□□ -0.81
SF3B4-202ENST00000457312 FABP12A6NFH5 140 aa10.01□□□□□ -0.81
SF3B4-202ENST00000457312 USP17L23D6RBM5 183 aa10.01□□□□□ -0.81
SF3B4-202ENST00000457312 H7C1H1 209 aa10.01□□□□□ -0.81
SF3B4-202ENST00000457312 RCVRNP35243 200 aa10.01□□□□□ -0.81
SF3B4-202ENST00000457312 OPCMLQ14982 345 aa10.01□□□□□ -0.81
SF3B4-202ENST00000457312 ZNF486Q96H40 463 aaPredicted RBP10.01□□□□□ -0.81
SF3B4-202ENST00000457312 FAM19A4Q96LR4 140 aa10.01□□□□□ -0.81
SF3B4-202ENST00000457312 OR4E1P0C645 316 aa10□□□□□ -0.81
SF3B4-202ENST00000457312 RPL19P84098 196 aaKnown RBP10□□□□□ -0.81
SF3B4-202ENST00000457312 PRR9Q5T870 116 aa10□□□□□ -0.81
SF3B4-202ENST00000457312 OR4C5Q8NGB2 326 aa10□□□□□ -0.81
SF3B4-202ENST00000457312 DTD1Q8TEA8 209 aa10□□□□□ -0.81
SF3B4-202ENST00000457312 CCSO14618 274 aa9.99□□□□□ -0.81
SF3B4-202ENST00000457312 RGS10O43665 173 aa9.99□□□□□ -0.81
SF3B4-202ENST00000457312 RAP2BP61225 183 aa9.99□□□□□ -0.81
SF3B4-202ENST00000457312 SRSF9Q13242 221 aaKnown RBP eCLIP9.99□□□□□ -0.81
SF3B4-202ENST00000457312 SLC25A29Q8N8R3 303 aa9.99□□□□□ -0.81
SF3B4-202ENST00000457312 C2orf50Q96LR7 162 aa9.99□□□□□ -0.81
SF3B4-202ENST00000457312 NDUFB11Q9NX14 153 aa9.99□□□□□ -0.81
SF3B4-202ENST00000457312 TRAV26-2A0A0B4J265 109 aa9.98□□□□□ -0.81
SF3B4-202ENST00000457312 H3BTX0 84 aa9.98□□□□□ -0.81
SF3B4-202ENST00000457312 TAAR5O14804 337 aa9.98□□□□□ -0.81
SF3B4-202ENST00000457312 SRSF3P84103 164 aaKnown RBP9.98□□□□□ -0.81
SF3B4-202ENST00000457312 ACOT7LQ6ZUV0 252 aa9.98□□□□□ -0.81
SF3B4-202ENST00000457312 UBE2WQ96B02 151 aa9.98□□□□□ -0.81
SF3B4-202ENST00000457312 KLK12Q9UKR0 248 aa9.98□□□□□ -0.81
SF3B4-202ENST00000457312 CDS2O95674 445 aa9.97□□□□□ -0.81
SF3B4-202ENST00000457312 OR10J4P0C629 311 aa9.97□□□□□ -0.81
SF3B4-202ENST00000457312 ERCC8Q13216 396 aa9.97□□□□□ -0.81
SF3B4-202ENST00000457312 OR4D10Q8NGI6 311 aa9.97□□□□□ -0.81
SF3B4-202ENST00000457312 DPH3Q96FX2 82 aa9.97□□□□□ -0.81
SF3B4-202ENST00000457312 OR51M1Q9H341 326 aa9.97□□□□□ -0.81
SF3B4-202ENST00000457312 RBKSQ9H477 322 aa9.97□□□□□ -0.81
SF3B4-202ENST00000457312 FAM231BA6NCW3 169 aa9.96□□□□□ -0.82
SF3B4-202ENST00000457312 ATP5IP56385 69 aaPredicted RBP9.96□□□□□ -0.82
SF3B4-202ENST00000457312 GTSF1Q8WW33 167 aa9.96□□□□□ -0.82
SF3B4-202ENST00000457312 HSPB7Q9UBY9 170 aa9.96□□□□□ -0.82
SF3B4-202ENST00000457312 HYPMO75409 117 aa9.95□□□□□ -0.82
SF3B4-202ENST00000457312 OR5G3P0C626 314 aa9.95□□□□□ -0.82
SF3B4-202ENST00000457312 CRISP2P16562 243 aa9.95□□□□□ -0.82
SF3B4-202ENST00000457312 RHOHQ15669 191 aa9.95□□□□□ -0.82
SF3B4-202ENST00000457312 NIT1Q86X76 327 aa9.95□□□□□ -0.82
SF3B4-202ENST00000457312 ZFAND2AQ8N6M9 145 aa9.95□□□□□ -0.82
SF3B4-202ENST00000457312 PRADC1Q9BSG0 188 aa9.95□□□□□ -0.82
SF3B4-202ENST00000457312 GPX1P07203 203 aa9.94□□□□□ -0.82
SF3B4-202ENST00000457312 CLEC2LP0C7M8 214 aa9.94□□□□□ -0.82
SF3B4-202ENST00000457312 SEC11BP0C7V7 166 aa9.94□□□□□ -0.82
SF3B4-202ENST00000457312 ANXA7P20073 488 aaKnown RBP9.94□□□□□ -0.82
SF3B4-202ENST00000457312 PLP1P60201 277 aa9.94□□□□□ -0.82
SF3B4-202ENST00000457312 SELENOHQ8IZQ5 122 aaKnown RBP9.94□□□□□ -0.82
SF3B4-202ENST00000457312 LINC00477Q96M19 166 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms