RNA–Protein interactions for RNA: ENST00000457264.5

MRPL55-222, Transcript of mitochondrial ribosomal protein L55, human

TSL 3

Gene MRPL55, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-222	ENST00000457264	APOB	P04114	4563 aa	Known RBP	11.5	□□□□□ -0.57
MRPL55-222	ENST00000457264	C9orf170	A2RU37	121 aa		11.5	□□□□□ -0.57
MRPL55-222	ENST00000457264		H3BTX0	84 aa		11.5	□□□□□ -0.57
MRPL55-222	ENST00000457264	AGPAT2	O15120	278 aa		11.5	□□□□□ -0.57
MRPL55-222	ENST00000457264		Q6ZTI0	123 aa		11.5	□□□□□ -0.57
MRPL55-222	ENST00000457264		A0A096LPF7	62 aa		11.49	□□□□□ -0.57
MRPL55-222	ENST00000457264	SLC17A3	O00476	420 aa		11.49	□□□□□ -0.57
MRPL55-222	ENST00000457264	CT45A10	P0DMU9	189 aa		11.49	□□□□□ -0.57
MRPL55-222	ENST00000457264	C4orf46	Q504U0	113 aa		11.49	□□□□□ -0.57
MRPL55-222	ENST00000457264	VSIG2	Q96IQ7	327 aa		11.49	□□□□□ -0.57
MRPL55-222	ENST00000457264	ODF3	Q96PU9	254 aa		11.49	□□□□□ -0.57
MRPL55-222	ENST00000457264		H3BMQ9	156 aa		11.48	□□□□□ -0.57
MRPL55-222	ENST00000457264	SIVA1	O15304	175 aa		11.48	□□□□□ -0.57
MRPL55-222	ENST00000457264	TSC22D2	O75157	780 aa		11.48	□□□□□ -0.57
MRPL55-222	ENST00000457264	SCGB1D2	O95969	90 aa		11.48	□□□□□ -0.57
MRPL55-222	ENST00000457264	TAS2R30	P59541	319 aa		11.48	□□□□□ -0.57
MRPL55-222	ENST00000457264	C10orf113	Q5VZT2	155 aa		11.48	□□□□□ -0.57
MRPL55-222	ENST00000457264	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	11.48	□□□□□ -0.57
MRPL55-222	ENST00000457264	ZNF431	Q8TF32	576 aa	Predicted RBP	11.48	□□□□□ -0.57
MRPL55-222	ENST00000457264	HERC1	Q15751	4861 aa		11.48	□□□□□ -0.57
MRPL55-222	ENST00000457264		H3BQ15	152 aa		11.47	□□□□□ -0.57
MRPL55-222	ENST00000457264	INAFM2	P0DMQ5	153 aa		11.47	□□□□□ -0.57
MRPL55-222	ENST00000457264	IGLC2	P0DOY2	106 aa		11.47	□□□□□ -0.57
MRPL55-222	ENST00000457264	OPCML	Q14982	345 aa		11.47	□□□□□ -0.57
MRPL55-222	ENST00000457264	GUK1	Q16774	197 aa		11.47	□□□□□ -0.57
MRPL55-222	ENST00000457264		Q6ZRN7	208 aa	Predicted RBP	11.47	□□□□□ -0.57
MRPL55-222	ENST00000457264	ZNF680	Q8NEM1	530 aa		11.47	□□□□□ -0.57
MRPL55-222	ENST00000457264	TMEM37	Q8WXS4	190 aa		11.47	□□□□□ -0.57
MRPL55-222	ENST00000457264	SAT2	Q96F10	170 aa	Predicted RBP	11.47	□□□□□ -0.57
MRPL55-222	ENST00000457264	GGACT	Q9BVM4	153 aa		11.47	□□□□□ -0.57
MRPL55-222	ENST00000457264		V9GYH0	126 aa		11.47	□□□□□ -0.57
MRPL55-222	ENST00000457264	TRGV1	A0A0A0MS02	117 aa		11.46	□□□□□ -0.57
MRPL55-222	ENST00000457264	LINC00854	A0A1B0GVQ3	168 aa		11.46	□□□□□ -0.57
MRPL55-222	ENST00000457264	NPIPB6	E9PJ23	425 aa		11.46	□□□□□ -0.57
MRPL55-222	ENST00000457264	SLC25A5	P05141	298 aa	Known RBP	11.46	□□□□□ -0.57
MRPL55-222	ENST00000457264	S100A5	P33763	92 aa		11.46	□□□□□ -0.57
MRPL55-222	ENST00000457264	ERVFC1-1	P60608	527 aa		11.46	□□□□□ -0.57
MRPL55-222	ENST00000457264	IAH1	Q2TAA2	248 aa	Predicted RBP	11.46	□□□□□ -0.57
MRPL55-222	ENST00000457264	MORN5	Q5VZ52	161 aa		11.46	□□□□□ -0.57
MRPL55-222	ENST00000457264	CDPF1	Q6NVV7	123 aa		11.46	□□□□□ -0.57
MRPL55-222	ENST00000457264		Q6ZRG5	221 aa		11.46	□□□□□ -0.57
MRPL55-222	ENST00000457264	LYPD1	Q8N2G4	141 aa		11.46	□□□□□ -0.57
MRPL55-222	ENST00000457264	C18orf15	Q96N68	181 aa		11.46	□□□□□ -0.57
MRPL55-222	ENST00000457264	DNAJC4	Q9NNZ3	241 aa		11.46	□□□□□ -0.57
MRPL55-222	ENST00000457264	GSN-AS1	Q9NRJ2	163 aa		11.46	□□□□□ -0.57
MRPL55-222	ENST00000457264	GSKIP	Q9P0R6	139 aa		11.46	□□□□□ -0.57
MRPL55-222	ENST00000457264	FUT9	Q9Y231	359 aa		11.46	□□□□□ -0.57
MRPL55-222	ENST00000457264	NXPH4	O95158	308 aa		11.45	□□□□□ -0.58
MRPL55-222	ENST00000457264	ARL16	Q0P5N6	197 aa		11.45	□□□□□ -0.58
MRPL55-222	ENST00000457264	RAB31	Q13636	194 aa		11.45	□□□□□ -0.58
MRPL55-222	ENST00000457264	MGST2	Q99735	147 aa		11.45	□□□□□ -0.58
MRPL55-222	ENST00000457264	C7orf71	A4D174	169 aa		11.44	□□□□□ -0.58
MRPL55-222	ENST00000457264	PAX4	O43316	350 aa		11.44	□□□□□ -0.58
MRPL55-222	ENST00000457264	NDUFB6	O95139	128 aa		11.44	□□□□□ -0.58
MRPL55-222	ENST00000457264	IFNA5	P01569	189 aa		11.44	□□□□□ -0.58
MRPL55-222	ENST00000457264	OR4E1	P0C645	316 aa		11.44	□□□□□ -0.58
MRPL55-222	ENST00000457264	FUS	P35637	526 aa	Known RBP eCLIP	11.44	□□□□□ -0.58
MRPL55-222	ENST00000457264	INPP1	P49441	399 aa		11.44	□□□□□ -0.58
MRPL55-222	ENST00000457264	XG	P55808	180 aa		11.44	□□□□□ -0.58
MRPL55-222	ENST00000457264	FLVCR2	Q9UPI3	526 aa		11.44	□□□□□ -0.58
MRPL55-222	ENST00000457264	ICOS	Q9Y6W8	199 aa		11.44	□□□□□ -0.58
MRPL55-222	ENST00000457264	TRAV5	A0A0B4J249	113 aa		11.43	□□□□□ -0.58
MRPL55-222	ENST00000457264	C7orf66	A4D0T2	115 aa		11.43	□□□□□ -0.58
MRPL55-222	ENST00000457264	NAP1L6	A6NFF2	107 aa		11.43	□□□□□ -0.58
MRPL55-222	ENST00000457264	ZNF324	O75467	553 aa	Predicted RBP	11.43	□□□□□ -0.58
MRPL55-222	ENST00000457264	CAMLG	P49069	296 aa		11.43	□□□□□ -0.58
MRPL55-222	ENST00000457264	NFE4	Q86UQ8	179 aa		11.43	□□□□□ -0.58
MRPL55-222	ENST00000457264	EIF4E3	Q8N5X7	224 aa	Known RBP	11.43	□□□□□ -0.58
MRPL55-222	ENST00000457264	C11orf72	Q8NBR9	251 aa		11.43	□□□□□ -0.58
MRPL55-222	ENST00000457264	FRZB	Q92765	325 aa		11.43	□□□□□ -0.58
MRPL55-222	ENST00000457264	TRAV9-2	A0A087WT02	112 aa		11.42	□□□□□ -0.58
MRPL55-222	ENST00000457264		L7N2F9	121 aa		11.42	□□□□□ -0.58
MRPL55-222	ENST00000457264	ZNF253	O75346	499 aa		11.42	□□□□□ -0.58
MRPL55-222	ENST00000457264	VAMP2	P63027	116 aa		11.42	□□□□□ -0.58
MRPL55-222	ENST00000457264	ANXA2R	Q3ZCQ2	193 aa		11.42	□□□□□ -0.58
MRPL55-222	ENST00000457264	NRARP	Q7Z6K4	114 aa		11.42	□□□□□ -0.58
MRPL55-222	ENST00000457264	OR1L4	Q8NGR5	311 aa		11.42	□□□□□ -0.58
MRPL55-222	ENST00000457264	MRPL53	Q96EL3	112 aa	Known RBP	11.42	□□□□□ -0.58
MRPL55-222	ENST00000457264	LINC00467	Q9BRT7	94 aa		11.42	□□□□□ -0.58
MRPL55-222	ENST00000457264	RCL1	Q9Y2P8	373 aa	Known RBP	11.42	□□□□□ -0.58
MRPL55-222	ENST00000457264	KLF12	Q9Y4X4	402 aa		11.42	□□□□□ -0.58
MRPL55-222	ENST00000457264	TNFRSF18	Q9Y5U5	241 aa		11.42	□□□□□ -0.58
MRPL55-222	ENST00000457264	MBP	P02686	304 aa	Predicted RBP	11.41	□□□□□ -0.58
MRPL55-222	ENST00000457264	RNASE4	P34096	147 aa	Known RBP	11.41	□□□□□ -0.58
MRPL55-222	ENST00000457264	CD300C	Q08708	224 aa		11.41	□□□□□ -0.58
MRPL55-222	ENST00000457264	ERCC8	Q13216	396 aa		11.41	□□□□□ -0.58
MRPL55-222	ENST00000457264		Q5VSD8	79 aa		11.41	□□□□□ -0.58
MRPL55-222	ENST00000457264	C12orf45	Q8N5I9	185 aa	Predicted RBP	11.41	□□□□□ -0.58
MRPL55-222	ENST00000457264	ST6GAL2	Q96JF0	529 aa		11.41	□□□□□ -0.58
MRPL55-222	ENST00000457264	LINC00477	Q96M19	166 aa		11.41	□□□□□ -0.58
MRPL55-222	ENST00000457264	PFDN5	Q99471	154 aa		11.41	□□□□□ -0.58
MRPL55-222	ENST00000457264	PRO0255	Q9UI72	69 aa		11.41	□□□□□ -0.58
MRPL55-222	ENST00000457264	KLLN	B2CW77	178 aa		11.4	□□□□□ -0.58
MRPL55-222	ENST00000457264		M0R3E3	92 aa		11.4	□□□□□ -0.58
MRPL55-222	ENST00000457264	SPINK4	O60575	86 aa		11.4	□□□□□ -0.58
MRPL55-222	ENST00000457264	MPDU1	O75352	247 aa		11.4	□□□□□ -0.58
MRPL55-222	ENST00000457264	IGHV3-53	P01767	116 aa		11.4	□□□□□ -0.58
MRPL55-222	ENST00000457264	BCAP31	P51572	246 aa		11.4	□□□□□ -0.58
MRPL55-222	ENST00000457264	TCL1A	P56279	114 aa		11.4	□□□□□ -0.58
MRPL55-222	ENST00000457264	SLA	Q13239	276 aa		11.4	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms