RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 TRAV19A0A0A6YYK7 116 aa4.11□□□□□ -1.75
VPS41-209ENST00000457055 MUC21A0A140T8X8 626 aa4.11□□□□□ -1.75
VPS41-209ENST00000457055 C4orf51C9J302 202 aa4.11□□□□□ -1.75
VPS41-209ENST00000457055 SYNGR2O43760 224 aa4.11□□□□□ -1.75
VPS41-209ENST00000457055 SSSCA1O60232 199 aa4.11□□□□□ -1.75
VPS41-209ENST00000457055 TRBV12-3P01733 135 aa4.11□□□□□ -1.75
VPS41-209ENST00000457055 COX7CP15954 63 aa4.11□□□□□ -1.75
VPS41-209ENST00000457055 IL3RAP26951 378 aa4.11□□□□□ -1.75
VPS41-209ENST00000457055 NPC2P61916 151 aa4.11□□□□□ -1.75
VPS41-209ENST00000457055 ADIGQ0VDE8 80 aa4.11□□□□□ -1.75
VPS41-209ENST00000457055 CDK5R1Q15078 307 aa4.11□□□□□ -1.75
VPS41-209ENST00000457055 MPV17L2Q567V2 206 aa4.11□□□□□ -1.75
VPS41-209ENST00000457055 MUC21Q5SSG8 566 aa4.11□□□□□ -1.75
VPS41-209ENST00000457055 LCE1EQ5T753 118 aa4.11□□□□□ -1.75
VPS41-209ENST00000457055 STPG1Q5TH74 334 aa4.11□□□□□ -1.75
VPS41-209ENST00000457055 LCA10Q71F78 164 aa4.11□□□□□ -1.75
VPS41-209ENST00000457055 DEFB107AQ8IZN7 70 aa4.11□□□□□ -1.75
VPS41-209ENST00000457055 RNF185Q96GF1 192 aa4.11□□□□□ -1.75
VPS41-209ENST00000457055 APC2O95996 2303 aa4.11□□□□□ -1.75
VPS41-209ENST00000457055 KIF26AQ9ULI4 1882 aaPredicted RBP4.11□□□□□ -1.75
VPS41-209ENST00000457055 GREB1LQ9C091 1923 aaPredicted RBP4.11□□□□□ -1.75
VPS41-209ENST00000457055 CREBBPQ92793 2442 aa4.11□□□□□ -1.75
VPS41-209ENST00000457055 THADAQ6YHU6 1953 aa4.11□□□□□ -1.75
VPS41-209ENST00000457055 UBR5O95071 2799 aaPredicted RBP4.1□□□□□ -1.75
VPS41-209ENST00000457055 GON4LQ3T8J9 2241 aa4.1□□□□□ -1.75
VPS41-209ENST00000457055 TRGV5A0A0B4J1U4 118 aa4.1□□□□□ -1.75
VPS41-209ENST00000457055 ZNF860A6NHJ4 632 aa4.1□□□□□ -1.75
VPS41-209ENST00000457055 A8MUN3 132 aa4.1□□□□□ -1.75
VPS41-209ENST00000457055 UMAD1C9J7I0 102 aa4.1□□□□□ -1.75
VPS41-209ENST00000457055 C17orf112F2Z3M2 114 aa4.1□□□□□ -1.75
VPS41-209ENST00000457055 H3BUT2 72 aa4.1□□□□□ -1.75
VPS41-209ENST00000457055 J3QKU1 62 aa4.1□□□□□ -1.75
VPS41-209ENST00000457055 LST1O00453 97 aa4.1□□□□□ -1.75
VPS41-209ENST00000457055 ATP6V0E1O15342 81 aa4.1□□□□□ -1.75
VPS41-209ENST00000457055 ZNF73O43830 326 aaPredicted RBP4.1□□□□□ -1.75
VPS41-209ENST00000457055 GYPBP06028 91 aa4.1□□□□□ -1.75
VPS41-209ENST00000457055 CXCL1P09341 107 aa4.1□□□□□ -1.75
VPS41-209ENST00000457055 ZNF688P0C7X2 276 aa4.1□□□□□ -1.75
VPS41-209ENST00000457055 ZNF286BP0CG31 522 aa4.1□□□□□ -1.75
VPS41-209ENST00000457055 GNLYP22749 145 aa4.1□□□□□ -1.75
VPS41-209ENST00000457055 HLA-DMBP28068 263 aa4.1□□□□□ -1.75
VPS41-209ENST00000457055 LMO4P61968 165 aa4.1□□□□□ -1.75
VPS41-209ENST00000457055 MRPS36P82909 103 aaKnown RBP4.1□□□□□ -1.75
VPS41-209ENST00000457055 FOXF1Q12946 379 aa4.1□□□□□ -1.75
VPS41-209ENST00000457055 FBXL19-AS1Q494R0 122 aa4.1□□□□□ -1.75
VPS41-209ENST00000457055 C6orf99Q4VX62 202 aa4.1□□□□□ -1.75
VPS41-209ENST00000457055 ZNF322Q6U7Q0 402 aaPredicted RBP4.1□□□□□ -1.75
VPS41-209ENST00000457055 DNM1P46Q6ZS02 220 aa4.1□□□□□ -1.75
VPS41-209ENST00000457055 COMMD6Q7Z4G1 85 aa4.1□□□□□ -1.75
VPS41-209ENST00000457055 ZNF843Q8N446 348 aa4.1□□□□□ -1.75
VPS41-209ENST00000457055 ZNF555Q8NEP9 628 aa4.1□□□□□ -1.75
VPS41-209ENST00000457055 OR5H2Q8NGV7 314 aa4.1□□□□□ -1.75
VPS41-209ENST00000457055 CMTM2Q8TAZ6 248 aa4.1□□□□□ -1.75
VPS41-209ENST00000457055 ZNF721Q8TF20 911 aa4.1□□□□□ -1.75
VPS41-209ENST00000457055 DCANP1Q8TF63 244 aa4.1□□□□□ -1.75
VPS41-209ENST00000457055 HIST1H4GQ99525 98 aa4.1□□□□□ -1.75
VPS41-209ENST00000457055 C16orf95Q9H693 158 aa4.1□□□□□ -1.75
VPS41-209ENST00000457055 SIX2Q9NPC8 291 aa4.1□□□□□ -1.75
VPS41-209ENST00000457055 SPRR3Q9UBC9 169 aa4.1□□□□□ -1.75
VPS41-209ENST00000457055 INSL5Q9Y5Q6 135 aa4.1□□□□□ -1.75
VPS41-209ENST00000457055 PHF3Q92576 2039 aaKnown RBP4.1□□□□□ -1.75
VPS41-209ENST00000457055 NOTCH4Q99466 2003 aa4.1□□□□□ -1.75
VPS41-209ENST00000457055 PTPRQQ9UMZ3 2332 aa4.1□□□□□ -1.75
VPS41-209ENST00000457055 PDCD11Q14690 1871 aaKnown RBP4.09□□□□□ -1.75
VPS41-209ENST00000457055 TRAV9-2A0A087WT02 112 aa4.09□□□□□ -1.75
VPS41-209ENST00000457055 FXYD6-FXYD2A0A087WZ82 144 aa4.09□□□□□ -1.75
VPS41-209ENST00000457055 IGLV5-39A0A0G2JS06 123 aa4.09□□□□□ -1.75
VPS41-209ENST00000457055 A0A0J9YXV3 536 aa4.09□□□□□ -1.75
VPS41-209ENST00000457055 TRBV27A0A0K0K1C4 114 aa4.09□□□□□ -1.75
VPS41-209ENST00000457055 RBAKDNA6NC62 111 aa4.09□□□□□ -1.75
VPS41-209ENST00000457055 NAP1L6A6NFF2 107 aa4.09□□□□□ -1.75
VPS41-209ENST00000457055 SNRPGP15A8MWD9 76 aa4.09□□□□□ -1.75
VPS41-209ENST00000457055 A8MWL6 223 aa4.09□□□□□ -1.75
VPS41-209ENST00000457055 KLLNB2CW77 178 aa4.09□□□□□ -1.75
VPS41-209ENST00000457055 IGLL5B9A064 214 aa4.09□□□□□ -1.75
VPS41-209ENST00000457055 C9JQL5 133 aa4.09□□□□□ -1.75
VPS41-209ENST00000457055 CBLN1P23435 193 aa4.09□□□□□ -1.75
VPS41-209ENST00000457055 FCGR2CP31995 323 aa4.09□□□□□ -1.75
VPS41-209ENST00000457055 NCBP2P52298 156 aaKnown RBP eCLIP4.09□□□□□ -1.75
VPS41-209ENST00000457055 WDR38Q5JTN6 314 aa4.09□□□□□ -1.75
VPS41-209ENST00000457055 LINC00242Q5T6M2 205 aa4.09□□□□□ -1.75
VPS41-209ENST00000457055 C11orf71Q6IPW1 123 aa4.09□□□□□ -1.75
VPS41-209ENST00000457055 TMEM91Q6ZNR0 172 aa4.09□□□□□ -1.75
VPS41-209ENST00000457055 METTL27Q8N6F8 245 aaPredicted RBP4.09□□□□□ -1.75
VPS41-209ENST00000457055 SIGLECL1Q8N7X8 197 aa4.09□□□□□ -1.75
VPS41-209ENST00000457055 FAM213BQ8TBF2 198 aa4.09□□□□□ -1.75
VPS41-209ENST00000457055 C18orf32Q8TCD1 76 aa4.09□□□□□ -1.75
VPS41-209ENST00000457055 TMEM158Q8WZ71 300 aa4.09□□□□□ -1.75
VPS41-209ENST00000457055 ABHD14BQ96IU4 210 aa4.09□□□□□ -1.75
VPS41-209ENST00000457055 POLR2J2Q9GZM3 115 aaKnown RBP4.09□□□□□ -1.75
VPS41-209ENST00000457055 FXYD6Q9H0Q3 95 aa4.09□□□□□ -1.75
VPS41-209ENST00000457055 TNFRSF19Q9NS68 423 aa4.09□□□□□ -1.75
VPS41-209ENST00000457055 XCL2Q9UBD3 114 aa4.09□□□□□ -1.75
VPS41-209ENST00000457055 CTSZQ9UBR2 303 aa4.09□□□□□ -1.75
VPS41-209ENST00000457055 ZNF835Q9Y2P0 537 aa4.09□□□□□ -1.75
VPS41-209ENST00000457055 COL6A6A6NMZ7 2263 aa4.09□□□□□ -1.76
VPS41-209ENST00000457055 C2CD3Q4AC94 2353 aa4.09□□□□□ -1.76
VPS41-209ENST00000457055 MYO9AB2RTY4 2548 aa4.09□□□□□ -1.76
VPS41-209ENST00000457055 IGHV1-69DA0A0B4J2H0 117 aa4.08□□□□□ -1.76
VPS41-209ENST00000457055 A0A0G2JRQ6 117 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms