RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 TSPOP30536 169 aa13.02□□□□□ -0.33
PDLIM2-215ENST00000456545 BAP18Q8IXM2 172 aa13.02□□□□□ -0.33
PDLIM2-215ENST00000456545 INO80EQ8NBZ0 244 aaPredicted RBP13.02□□□□□ -0.33
PDLIM2-215ENST00000456545 LINC01587Q99440 93 aa13.02□□□□□ -0.33
PDLIM2-215ENST00000456545 WFDC1Q9HC57 220 aa13.02□□□□□ -0.33
PDLIM2-215ENST00000456545 LOC102723971A0A1B0GUV8 181 aa13.01□□□□□ -0.33
PDLIM2-215ENST00000456545 PRAC2D3DTV9 90 aa13.01□□□□□ -0.33
PDLIM2-215ENST00000456545 CDKN1BP46527 198 aa13.01□□□□□ -0.33
PDLIM2-215ENST00000456545 TAS2R45P59539 299 aa13.01□□□□□ -0.33
PDLIM2-215ENST00000456545 PDE6HQ13956 83 aa13.01□□□□□ -0.33
PDLIM2-215ENST00000456545 ZNF266Q14584 549 aa13.01□□□□□ -0.33
PDLIM2-215ENST00000456545 ACOT6Q3I5F7 207 aaPredicted RBP13.01□□□□□ -0.33
PDLIM2-215ENST00000456545 RNF141Q8WVD5 230 aa13.01□□□□□ -0.33
PDLIM2-215ENST00000456545 PARD6GQ9BYG4 376 aaPredicted RBP13.01□□□□□ -0.33
PDLIM2-215ENST00000456545 TRAV10A0A0B4J240 114 aa13□□□□□ -0.33
PDLIM2-215ENST00000456545 A0A1W2PPV4 95 aa13□□□□□ -0.33
PDLIM2-215ENST00000456545 IGLL5B9A064 214 aa13□□□□□ -0.33
PDLIM2-215ENST00000456545 LY6G6CO95867 125 aa13□□□□□ -0.33
PDLIM2-215ENST00000456545 OR10J4P0C629 311 aa13□□□□□ -0.33
PDLIM2-215ENST00000456545 OXA1LQ15070 435 aa13□□□□□ -0.33
PDLIM2-215ENST00000456545 Q6ZTC4 211 aa13□□□□□ -0.33
PDLIM2-215ENST00000456545 ZNF767PQ75MW2 155 aa13□□□□□ -0.33
PDLIM2-215ENST00000456545 RPP25LQ8N5L8 163 aaKnown RBP13□□□□□ -0.33
PDLIM2-215ENST00000456545 MRPL53Q96EL3 112 aaKnown RBP13□□□□□ -0.33
PDLIM2-215ENST00000456545 CELA1Q9UNI1 258 aa13□□□□□ -0.33
PDLIM2-215ENST00000456545 FXYD6-FXYD2A0A087WZ82 144 aa12.99□□□□□ -0.33
PDLIM2-215ENST00000456545 TEX48A0A1B0GUV7 120 aa12.99□□□□□ -0.33
PDLIM2-215ENST00000456545 ZNF705GA8MUZ8 300 aaPredicted RBP12.99□□□□□ -0.33
PDLIM2-215ENST00000456545 CRXO43186 299 aaPredicted RBP12.99□□□□□ -0.33
PDLIM2-215ENST00000456545 HTN1P15515 57 aa12.99□□□□□ -0.33
PDLIM2-215ENST00000456545 ICAM4Q14773 271 aa12.99□□□□□ -0.33
PDLIM2-215ENST00000456545 KHDC3LQ587J8 217 aa12.99□□□□□ -0.33
PDLIM2-215ENST00000456545 TMEM256Q8N2U0 113 aa12.99□□□□□ -0.33
PDLIM2-215ENST00000456545 EXOC3-AS1Q8N2X6 119 aa12.99□□□□□ -0.33
PDLIM2-215ENST00000456545 OR2T35Q8NGX2 323 aa12.99□□□□□ -0.33
PDLIM2-215ENST00000456545 FAM167A-AS1Q96KT0 104 aa12.99□□□□□ -0.33
PDLIM2-215ENST00000456545 AQP10Q96PS8 301 aa12.99□□□□□ -0.33
PDLIM2-215ENST00000456545 STARD9Q9P2P6 4700 aa12.99□□□□□ -0.33
PDLIM2-215ENST00000456545 TENM2Q9NT68 2774 aa12.98□□□□□ -0.33
PDLIM2-215ENST00000456545 M0R3E3 92 aa12.98□□□□□ -0.33
PDLIM2-215ENST00000456545 NDUFB4O95168 129 aa12.98□□□□□ -0.33
PDLIM2-215ENST00000456545 LEPP41159 167 aa12.98□□□□□ -0.33
PDLIM2-215ENST00000456545 C12orf74Q32Q52 190 aa12.98□□□□□ -0.33
PDLIM2-215ENST00000456545 Q5BKY6 102 aa12.98□□□□□ -0.33
PDLIM2-215ENST00000456545 HSD17B11Q8NBQ5 300 aa12.98□□□□□ -0.33
PDLIM2-215ENST00000456545 J3KRW8 73 aa12.97□□□□□ -0.33
PDLIM2-215ENST00000456545 M6PRP20645 277 aa12.97□□□□□ -0.33
PDLIM2-215ENST00000456545 UBE2L3P68036 154 aaKnown RBP12.97□□□□□ -0.33
PDLIM2-215ENST00000456545 FAM222AQ5U5X8 452 aa12.97□□□□□ -0.33
PDLIM2-215ENST00000456545 FAM122CQ6P4D5 195 aa12.97□□□□□ -0.33
PDLIM2-215ENST00000456545 YTHDF2Q9Y5A9 579 aaKnown RBP12.97□□□□□ -0.33
PDLIM2-215ENST00000456545 CSMD3Q7Z407 3707 aa12.96□□□□□ -0.33
PDLIM2-215ENST00000456545 DEFB131BA0A096LNP1 70 aa12.96□□□□□ -0.33
PDLIM2-215ENST00000456545 CSN1S1P47710 185 aa12.96□□□□□ -0.33
PDLIM2-215ENST00000456545 TCTAP57738 103 aa12.96□□□□□ -0.33
PDLIM2-215ENST00000456545 RANP62826 216 aaKnown RBP12.96□□□□□ -0.33
PDLIM2-215ENST00000456545 OR10G4Q8NGN3 311 aa12.96□□□□□ -0.33
PDLIM2-215ENST00000456545 OR10G9Q8NGN4 311 aa12.96□□□□□ -0.33
PDLIM2-215ENST00000456545 OR10G7Q8NGN6 311 aa12.96□□□□□ -0.33
PDLIM2-215ENST00000456545 FXYD5Q96DB9 178 aa12.96□□□□□ -0.33
PDLIM2-215ENST00000456545 LINC00477Q96M19 166 aa12.96□□□□□ -0.33
PDLIM2-215ENST00000456545 NIPSNAP3BQ9BS92 247 aa12.96□□□□□ -0.33
PDLIM2-215ENST00000456545 DKK2Q9UBU2 259 aa12.96□□□□□ -0.33
PDLIM2-215ENST00000456545 BORCS7-ASMTA0A0B4J1R7 106 aa12.95□□□□□ -0.34
PDLIM2-215ENST00000456545 NPIPB6E9PJ23 425 aa12.95□□□□□ -0.34
PDLIM2-215ENST00000456545 CT45A10P0DMU9 189 aa12.95□□□□□ -0.34
PDLIM2-215ENST00000456545 TAS2R60P59551 318 aa12.95□□□□□ -0.34
PDLIM2-215ENST00000456545 ERCC8Q13216 396 aa12.95□□□□□ -0.34
PDLIM2-215ENST00000456545 CCDC28AQ8IWP9 274 aa12.95□□□□□ -0.34
PDLIM2-215ENST00000456545 LINC00476Q8WZB0 136 aa12.95□□□□□ -0.34
PDLIM2-215ENST00000456545 C20orf144Q9BQM9 153 aa12.95□□□□□ -0.34
PDLIM2-215ENST00000456545 PRM2P04554 102 aa12.94□□□□□ -0.34
PDLIM2-215ENST00000456545 RAB2AP61019 212 aa12.94□□□□□ -0.34
PDLIM2-215ENST00000456545 TMEM78Q5T7P6 136 aa12.94□□□□□ -0.34
PDLIM2-215ENST00000456545 ODF3Q96PU9 254 aa12.94□□□□□ -0.34
PDLIM2-215ENST00000456545 H7BYZ3 331 aa12.93□□□□□ -0.34
PDLIM2-215ENST00000456545 MBP02144 154 aa12.93□□□□□ -0.34
PDLIM2-215ENST00000456545 HTN3P15516 51 aa12.93□□□□□ -0.34
PDLIM2-215ENST00000456545 DAD1P61803 113 aa12.93□□□□□ -0.34
PDLIM2-215ENST00000456545 LYPD1Q8N2G4 141 aa12.93□□□□□ -0.34
PDLIM2-215ENST00000456545 PHYHIPLQ96FC7 376 aa12.93□□□□□ -0.34
PDLIM2-215ENST00000456545 PLA2G2EQ9NZK7 142 aa12.93□□□□□ -0.34
PDLIM2-215ENST00000456545 TNFSF18Q9UNG2 199 aa12.93□□□□□ -0.34
PDLIM2-215ENST00000456545 TRAV12-3A0A0B4J271 114 aa12.92□□□□□ -0.34
PDLIM2-215ENST00000456545 EIF3GO75821 320 aaKnown RBP eCLIP12.92□□□□□ -0.34
PDLIM2-215ENST00000456545 AZU1P20160 251 aa12.92□□□□□ -0.34
PDLIM2-215ENST00000456545 ATP6V0CP27449 155 aa12.92□□□□□ -0.34
PDLIM2-215ENST00000456545 SERF2P84101 59 aa12.92□□□□□ -0.34
PDLIM2-215ENST00000456545 KIR3DS1Q14943 382 aa12.92□□□□□ -0.34
PDLIM2-215ENST00000456545 FAM74A1Q5RGS3 127 aa12.92□□□□□ -0.34
PDLIM2-215ENST00000456545 GFI1BQ5VTD9 330 aa12.92□□□□□ -0.34
PDLIM2-215ENST00000456545 PQLC2Q6ZP29 291 aa12.92□□□□□ -0.34
PDLIM2-215ENST00000456545 ZNF503Q96F45 646 aa12.92□□□□□ -0.34
PDLIM2-215ENST00000456545 C16orf74Q96GX8 76 aa12.92□□□□□ -0.34
PDLIM2-215ENST00000456545 PSMG3Q9BT73 122 aaPredicted RBP12.92□□□□□ -0.34
PDLIM2-215ENST00000456545 AGPAT4-IT1Q9H0P7 198 aa12.92□□□□□ -0.34
PDLIM2-215ENST00000456545 Q9H3A6 140 aa12.92□□□□□ -0.34
PDLIM2-215ENST00000456545 IGHV4-4A0A075B6R2 117 aa12.91□□□□□ -0.34
PDLIM2-215ENST00000456545 IGKV2-40A0A087WW87 121 aaPredicted RBP12.91□□□□□ -0.34
PDLIM2-215ENST00000456545 HMGB3O15347 200 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms