RNA–Protein interactions for RNA: ENST00000455069.1

HDAC9-217, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-217ENST00000455069 M0R3E3 92 aa8.13□□□□□ -1.11
HDAC9-217ENST00000455069 ZNF253O75346 499 aa8.13□□□□□ -1.11
HDAC9-217ENST00000455069 EIF3GO75821 320 aaKnown RBP eCLIP8.13□□□□□ -1.11
HDAC9-217ENST00000455069 IFNA5P01569 189 aa8.13□□□□□ -1.11
HDAC9-217ENST00000455069 HIST1H1EP10412 219 aaKnown RBP8.13□□□□□ -1.11
HDAC9-217ENST00000455069 LCE2AQ5TA79 106 aaPredicted RBP8.13□□□□□ -1.11
HDAC9-217ENST00000455069 C11orf45Q8TAV5 145 aa8.13□□□□□ -1.11
HDAC9-217ENST00000455069 ASB13Q8WXK3 278 aa8.13□□□□□ -1.11
HDAC9-217ENST00000455069 FXYD5Q96DB9 178 aa8.13□□□□□ -1.11
HDAC9-217ENST00000455069 IGF2BP2-AS1Q96M15 143 aa8.13□□□□□ -1.11
HDAC9-217ENST00000455069 NEU1Q99519 415 aa8.13□□□□□ -1.11
HDAC9-217ENST00000455069 MRPL32Q9BYC8 188 aaKnown RBP8.13□□□□□ -1.11
HDAC9-217ENST00000455069 TRAV12-2A0A075B6T6 113 aa8.12□□□□□ -1.11
HDAC9-217ENST00000455069 OR10J4P0C629 311 aa8.12□□□□□ -1.11
HDAC9-217ENST00000455069 CEMP1Q6PRD7 247 aaPredicted RBP8.12□□□□□ -1.11
HDAC9-217ENST00000455069 OR2T35Q8NGX2 323 aa8.12□□□□□ -1.11
HDAC9-217ENST00000455069 SCGB1C1Q8TD33 95 aa8.12□□□□□ -1.11
HDAC9-217ENST00000455069 PHLDA1Q8WV24 401 aaPredicted RBP8.12□□□□□ -1.11
HDAC9-217ENST00000455069 BLNKQ8WV28 456 aa8.12□□□□□ -1.11
HDAC9-217ENST00000455069 TNFSF18Q9UNG2 199 aa8.12□□□□□ -1.11
HDAC9-217ENST00000455069 FXYD6-FXYD2A0A087WZ82 144 aa8.11□□□□□ -1.11
HDAC9-217ENST00000455069 NUPR2A6NF83 97 aa8.11□□□□□ -1.11
HDAC9-217ENST00000455069 PRM2P04554 102 aa8.11□□□□□ -1.11
HDAC9-217ENST00000455069 RAB2AP61019 212 aa8.11□□□□□ -1.11
HDAC9-217ENST00000455069 RHOBP62745 196 aa8.11□□□□□ -1.11
HDAC9-217ENST00000455069 PDE6HQ13956 83 aa8.11□□□□□ -1.11
HDAC9-217ENST00000455069 KIR3DS1Q14943 382 aa8.11□□□□□ -1.11
HDAC9-217ENST00000455069 EXOC3-AS1Q8N2X6 119 aa8.11□□□□□ -1.11
HDAC9-217ENST00000455069 PHYHIPLQ96FC7 376 aa8.11□□□□□ -1.11
HDAC9-217ENST00000455069 PAXXQ9BUH6 204 aa8.11□□□□□ -1.11
HDAC9-217ENST00000455069 OR51M1Q9H341 326 aa8.11□□□□□ -1.11
HDAC9-217ENST00000455069 TIMM9Q9Y5J7 89 aa8.11□□□□□ -1.11
HDAC9-217ENST00000455069 ALMS1Q8TCU4 4167 aa8.11□□□□□ -1.11
HDAC9-217ENST00000455069 SMIM9A6NGZ8 99 aa8.1□□□□□ -1.11
HDAC9-217ENST00000455069 NPIPB6E9PJ23 425 aa8.1□□□□□ -1.11
HDAC9-217ENST00000455069 SMLR1H3BR10 107 aa8.1□□□□□ -1.11
HDAC9-217ENST00000455069 INSP01308 110 aa8.1□□□□□ -1.11
HDAC9-217ENST00000455069 AMBPP02760 352 aa8.1□□□□□ -1.11
HDAC9-217ENST00000455069 NBEAP1P0C6P0 100 aa8.1□□□□□ -1.11
HDAC9-217ENST00000455069 ZNF266Q14584 549 aa8.1□□□□□ -1.11
HDAC9-217ENST00000455069 Q6ZTC4 211 aa8.1□□□□□ -1.11
HDAC9-217ENST00000455069 ZNF767PQ75MW2 155 aa8.1□□□□□ -1.11
HDAC9-217ENST00000455069 HSD17B11Q8NBQ5 300 aa8.1□□□□□ -1.11
HDAC9-217ENST00000455069 MRPL53Q96EL3 112 aaKnown RBP8.1□□□□□ -1.11
HDAC9-217ENST00000455069 SH3BGRL3Q9H299 93 aa8.1□□□□□ -1.11
HDAC9-217ENST00000455069 GOLT1BQ9Y3E0 138 aa8.1□□□□□ -1.11
HDAC9-217ENST00000455069 OR7C2O60412 319 aa8.09□□□□□ -1.11
HDAC9-217ENST00000455069 CT45A10P0DMU9 189 aa8.09□□□□□ -1.11
HDAC9-217ENST00000455069 M6PRP20645 277 aa8.09□□□□□ -1.11
HDAC9-217ENST00000455069 ATP6V0CP27449 155 aa8.09□□□□□ -1.11
HDAC9-217ENST00000455069 CDKN1BP46527 198 aa8.09□□□□□ -1.11
HDAC9-217ENST00000455069 ERCC8Q13216 396 aa8.09□□□□□ -1.11
HDAC9-217ENST00000455069 ICAM4Q14773 271 aa8.09□□□□□ -1.11
HDAC9-217ENST00000455069 C12orf74Q32Q52 190 aa8.09□□□□□ -1.11
HDAC9-217ENST00000455069 RPL7L1Q6DKI1 246 aaKnown RBP8.09□□□□□ -1.11
HDAC9-217ENST00000455069 RPP25LQ8N5L8 163 aaKnown RBP8.09□□□□□ -1.11
HDAC9-217ENST00000455069 OR10J6PQ8NGY7 276 aa8.09□□□□□ -1.11
HDAC9-217ENST00000455069 OR2G3Q8NGZ4 309 aa8.09□□□□□ -1.11
HDAC9-217ENST00000455069 RNF141Q8WVD5 230 aa8.09□□□□□ -1.11
HDAC9-217ENST00000455069 IGKV2-40A0A087WW87 121 aaPredicted RBP8.08□□□□□ -1.12
HDAC9-217ENST00000455069 LOC102723971A0A1B0GUV8 181 aa8.08□□□□□ -1.12
HDAC9-217ENST00000455069 PLAC8L1A1L4L8 177 aa8.08□□□□□ -1.12
HDAC9-217ENST00000455069 ZNF705GA8MUZ8 300 aaPredicted RBP8.08□□□□□ -1.12
HDAC9-217ENST00000455069 IGKV2D-40P01614 121 aaPredicted RBP8.08□□□□□ -1.12
HDAC9-217ENST00000455069 HBE1P02100 147 aa8.08□□□□□ -1.12
HDAC9-217ENST00000455069 EMP1P54849 157 aa8.08□□□□□ -1.12
HDAC9-217ENST00000455069 UBE2L3P68036 154 aaKnown RBP8.08□□□□□ -1.12
HDAC9-217ENST00000455069 ACOT6Q3I5F7 207 aaPredicted RBP8.08□□□□□ -1.12
HDAC9-217ENST00000455069 KHDC3LQ587J8 217 aa8.08□□□□□ -1.12
HDAC9-217ENST00000455069 GFI1BQ5VTD9 330 aa8.08□□□□□ -1.12
HDAC9-217ENST00000455069 FAM122CQ6P4D5 195 aa8.08□□□□□ -1.12
HDAC9-217ENST00000455069 INO80EQ8NBZ0 244 aaPredicted RBP8.08□□□□□ -1.12
HDAC9-217ENST00000455069 PSMG3Q9BT73 122 aaPredicted RBP8.08□□□□□ -1.12
HDAC9-217ENST00000455069 PRELID1Q9Y255 219 aa8.08□□□□□ -1.12
HDAC9-217ENST00000455069 HMGB3O15347 200 aaKnown RBP8.07□□□□□ -1.12
HDAC9-217ENST00000455069 ARPC5O15511 151 aa8.07□□□□□ -1.12
HDAC9-217ENST00000455069 JTBO76095 146 aa8.07□□□□□ -1.12
HDAC9-217ENST00000455069 AZU1P20160 251 aa8.07□□□□□ -1.12
HDAC9-217ENST00000455069 RRN3P1Q2M238 152 aa8.07□□□□□ -1.12
HDAC9-217ENST00000455069 FAM222AQ5U5X8 452 aa8.07□□□□□ -1.12
HDAC9-217ENST00000455069 OR11H4Q8NGC9 324 aa8.07□□□□□ -1.12
HDAC9-217ENST00000455069 OR10G4Q8NGN3 311 aa8.07□□□□□ -1.12
HDAC9-217ENST00000455069 OR10G9Q8NGN4 311 aa8.07□□□□□ -1.12
HDAC9-217ENST00000455069 OR10G7Q8NGN6 311 aa8.07□□□□□ -1.12
HDAC9-217ENST00000455069 FAM19A4Q96LR4 140 aa8.07□□□□□ -1.12
HDAC9-217ENST00000455069 ODF3Q96PU9 254 aa8.07□□□□□ -1.12
HDAC9-217ENST00000455069 TMEM208Q9BTX3 173 aa8.07□□□□□ -1.12
HDAC9-217ENST00000455069 Q9H3A6 140 aa8.07□□□□□ -1.12
HDAC9-217ENST00000455069 AAMDCQ9H7C9 122 aa8.07□□□□□ -1.12
HDAC9-217ENST00000455069 PPP1R14DQ9NXH3 145 aa8.07□□□□□ -1.12
HDAC9-217ENST00000455069 DKK2Q9UBU2 259 aa8.07□□□□□ -1.12
HDAC9-217ENST00000455069 YTHDF2Q9Y5A9 579 aaKnown RBP8.07□□□□□ -1.12
HDAC9-217ENST00000455069 TMEM189A5PLL7 270 aa8.06□□□□□ -1.12
HDAC9-217ENST00000455069 J3KRW8 73 aa8.06□□□□□ -1.12
HDAC9-217ENST00000455069 TAS2R45P59539 299 aa8.06□□□□□ -1.12
HDAC9-217ENST00000455069 RANP62826 216 aaKnown RBP8.06□□□□□ -1.12
HDAC9-217ENST00000455069 C9orf47Q6ZRZ4 202 aa8.06□□□□□ -1.12
HDAC9-217ENST00000455069 SSX7Q7RTT5 188 aa8.06□□□□□ -1.12
HDAC9-217ENST00000455069 LINC00476Q8WZB0 136 aa8.06□□□□□ -1.12
HDAC9-217ENST00000455069 VGLL1Q99990 258 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms