RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 PRB1P04280 392 aa9.43□□□□□ -0.9
SMPD4-213ENST00000454468 GPX1P07203 203 aa9.43□□□□□ -0.9
SMPD4-213ENST00000454468 SRD5A1P18405 259 aa9.43□□□□□ -0.9
SMPD4-213ENST00000454468 TWIST1Q15672 202 aa9.43□□□□□ -0.9
SMPD4-213ENST00000454468 ZNF562Q6V9R5 426 aa9.43□□□□□ -0.9
SMPD4-213ENST00000454468 KCNS1Q96KK3 526 aa9.43□□□□□ -0.9
SMPD4-213ENST00000454468 ARMS2P0C7Q2 107 aa9.43□□□□□ -0.9
SMPD4-213ENST00000454468 PDLIM4P50479 330 aa9.43□□□□□ -0.9
SMPD4-213ENST00000454468 FA2HQ7L5A8 372 aa9.43□□□□□ -0.9
SMPD4-213ENST00000454468 WFDC12Q8WWY7 111 aa9.43□□□□□ -0.9
SMPD4-213ENST00000454468 C7orf69Q9H7B7 122 aa9.43□□□□□ -0.9
SMPD4-213ENST00000454468 TP53TG3Q9ULZ0 132 aa9.43□□□□□ -0.9
SMPD4-213ENST00000454468 TRBV9A0A0B4J1U6 114 aa9.43□□□□□ -0.9
SMPD4-213ENST00000454468 K7ERU9 68 aa9.43□□□□□ -0.9
SMPD4-213ENST00000454468 SNAI2O43623 268 aa9.43□□□□□ -0.9
SMPD4-213ENST00000454468 ERCC8Q13216 396 aa9.43□□□□□ -0.9
SMPD4-213ENST00000454468 NIT1Q86X76 327 aa9.43□□□□□ -0.9
SMPD4-213ENST00000454468 OR8A1Q8NGG7 326 aa9.43□□□□□ -0.9
SMPD4-213ENST00000454468 CRYBG3Q68DQ2 2970 aa9.42□□□□□ -0.9
SMPD4-213ENST00000454468 ACANP16112 2415 aa9.42□□□□□ -0.9
SMPD4-213ENST00000454468 C3orf79P0CE67 100 aa9.42□□□□□ -0.9
SMPD4-213ENST00000454468 MRGPRG-AS1Q2M3A8 158 aa9.42□□□□□ -0.9
SMPD4-213ENST00000454468 RBPMS2Q6ZRY4 209 aaKnown RBP9.42□□□□□ -0.9
SMPD4-213ENST00000454468 Q86TA4 180 aa9.42□□□□□ -0.9
SMPD4-213ENST00000454468 C8orf31Q8N9H6 132 aa9.42□□□□□ -0.9
SMPD4-213ENST00000454468 C18orf32Q8TCD1 76 aa9.42□□□□□ -0.9
SMPD4-213ENST00000454468 NDFIP1Q9BT67 221 aa9.42□□□□□ -0.9
SMPD4-213ENST00000454468 SHANK2-AS3Q9BTD1 123 aa9.42□□□□□ -0.9
SMPD4-213ENST00000454468 M0R1W7 72 aa9.42□□□□□ -0.9
SMPD4-213ENST00000454468 TRGV3P03979 118 aa9.42□□□□□ -0.9
SMPD4-213ENST00000454468 HOXB4P17483 251 aaPredicted RBP9.42□□□□□ -0.9
SMPD4-213ENST00000454468 RPL7P18124 248 aaKnown RBP9.42□□□□□ -0.9
SMPD4-213ENST00000454468 ZC2HC1AQ96GY0 325 aa9.42□□□□□ -0.9
SMPD4-213ENST00000454468 UFC1Q9Y3C8 167 aa9.42□□□□□ -0.9
SMPD4-213ENST00000454468 TRBV19A0A075B6N1 114 aa9.42□□□□□ -0.9
SMPD4-213ENST00000454468 SMIM27A0A1W2PRY6 76 aa9.42□□□□□ -0.9
SMPD4-213ENST00000454468 COX19Q49B96 90 aa9.42□□□□□ -0.9
SMPD4-213ENST00000454468 STPG4Q8N801 248 aa9.42□□□□□ -0.9
SMPD4-213ENST00000454468 DEFB104AQ8WTQ1 72 aa9.42□□□□□ -0.9
SMPD4-213ENST00000454468 GLMPQ8WWB7 406 aa9.42□□□□□ -0.9
SMPD4-213ENST00000454468 DOPEY1Q5JWR5 2465 aa9.41□□□□□ -0.9
SMPD4-213ENST00000454468 UBE2V1Q13404 147 aa9.41□□□□□ -0.9
SMPD4-213ENST00000454468 COA6Q5JTJ3 125 aaKnown RBP9.41□□□□□ -0.9
SMPD4-213ENST00000454468 GDF5OSQ5U4N7 250 aa9.41□□□□□ -0.9
SMPD4-213ENST00000454468 PVRIGQ6DKI7 326 aa9.41□□□□□ -0.9
SMPD4-213ENST00000454468 TRAV30A0A087WSZ9 112 aa9.41□□□□□ -0.9
SMPD4-213ENST00000454468 A0A1B0GUT8 65 aa9.41□□□□□ -0.9
SMPD4-213ENST00000454468 TOMM40O96008 361 aa9.41□□□□□ -0.9
SMPD4-213ENST00000454468 CRYGCP07315 174 aa9.41□□□□□ -0.9
SMPD4-213ENST00000454468 MEGF9Q9H1U4 602 aa9.41□□□□□ -0.9
SMPD4-213ENST00000454468 RNF114Q9Y508 228 aa9.41□□□□□ -0.9
SMPD4-213ENST00000454468 ANKRD17O75179 2603 aaKnown RBP9.41□□□□□ -0.9
SMPD4-213ENST00000454468 TRAV9-1A0A075B6T8 112 aa9.4□□□□□ -0.9
SMPD4-213ENST00000454468 SMKR1H3BMG3 65 aa9.4□□□□□ -0.9
SMPD4-213ENST00000454468 LEPROTL1O95214 131 aa9.4□□□□□ -0.9
SMPD4-213ENST00000454468 RIGQ13278 110 aa9.4□□□□□ -0.9
SMPD4-213ENST00000454468 OR11H6Q8NGC7 330 aa9.4□□□□□ -0.9
SMPD4-213ENST00000454468 GTSF1Q8WW33 167 aa9.4□□□□□ -0.9
SMPD4-213ENST00000454468 HRNRQ86YZ3 2850 aaPredicted RBP9.4□□□□□ -0.9
SMPD4-213ENST00000454468 NCR2O95944 276 aa9.4□□□□□ -0.9
SMPD4-213ENST00000454468 CRYGBP07316 175 aa9.4□□□□□ -0.9
SMPD4-213ENST00000454468 KHDC1LQ5JSQ8 128 aa9.4□□□□□ -0.9
SMPD4-213ENST00000454468 FANCD2OSQ96PS1 177 aa9.4□□□□□ -0.9
SMPD4-213ENST00000454468 DUX5Q96PT3 197 aa9.4□□□□□ -0.9
SMPD4-213ENST00000454468 TMEM213A2RRL7 107 aa9.4□□□□□ -0.91
SMPD4-213ENST00000454468 NPFFO15130 113 aa9.4□□□□□ -0.91
SMPD4-213ENST00000454468 SPRY2O43597 315 aa9.4□□□□□ -0.91
SMPD4-213ENST00000454468 IGHV7-81A0A0B4J1V7 117 aa9.39□□□□□ -0.91
SMPD4-213ENST00000454468 FBXL19-AS1Q494R0 122 aa9.39□□□□□ -0.91
SMPD4-213ENST00000454468 C16orf92Q96LL3 132 aa9.39□□□□□ -0.91
SMPD4-213ENST00000454468 IGKV3-20P01619 116 aa9.39□□□□□ -0.91
SMPD4-213ENST00000454468 APOHP02749 345 aaPredicted RBP9.39□□□□□ -0.91
SMPD4-213ENST00000454468 ITLN2Q8WWU7 325 aaPredicted RBP9.39□□□□□ -0.91
SMPD4-213ENST00000454468 CFHR4Q92496 578 aa9.39□□□□□ -0.91
SMPD4-213ENST00000454468 VGLL1Q99990 258 aa9.39□□□□□ -0.91
SMPD4-213ENST00000454468 LAMTOR2Q9Y2Q5 125 aa9.39□□□□□ -0.91
SMPD4-213ENST00000454468 CFAP46Q8IYW2 2715 aa9.39□□□□□ -0.91
SMPD4-213ENST00000454468 UTP20O75691 2785 aaKnown RBP9.39□□□□□ -0.91
SMPD4-213ENST00000454468 H3BUX3 64 aa9.39□□□□□ -0.91
SMPD4-213ENST00000454468 LYZL1Q6UWQ5 148 aa9.39□□□□□ -0.91
SMPD4-213ENST00000454468 RNF5Q99942 180 aa9.39□□□□□ -0.91
SMPD4-213ENST00000454468 IGHV2-70DA0A0C4DH43 119 aa9.38□□□□□ -0.91
SMPD4-213ENST00000454468 VWC2LB2RUY7 222 aa9.38□□□□□ -0.91
SMPD4-213ENST00000454468 ATP5G2Q06055 141 aa9.38□□□□□ -0.91
SMPD4-213ENST00000454468 C18orf15Q96N68 181 aa9.38□□□□□ -0.91
SMPD4-213ENST00000454468 PIMREGQ9BSJ6 248 aa9.38□□□□□ -0.91
SMPD4-213ENST00000454468 IGHV4-61A0A0C4DH41 118 aa9.38□□□□□ -0.91
SMPD4-213ENST00000454468 TMEM238LA0A1B0GVL6 79 aa9.38□□□□□ -0.91
SMPD4-213ENST00000454468 LY6LH3BQJ8 138 aa9.38□□□□□ -0.91
SMPD4-213ENST00000454468 OR5AL1P0C617 328 aa9.38□□□□□ -0.91
SMPD4-213ENST00000454468 LINC00310P59036 64 aa9.38□□□□□ -0.91
SMPD4-213ENST00000454468 DEFB1P60022 68 aa9.38□□□□□ -0.91
SMPD4-213ENST00000454468 LINC00173Q6ZV60 143 aa9.38□□□□□ -0.91
SMPD4-213ENST00000454468 ZNF414Q96IQ9 312 aa9.38□□□□□ -0.91
SMPD4-213ENST00000454468 METTL26Q96S19 204 aa9.38□□□□□ -0.91
SMPD4-213ENST00000454468 IGHV4-39P01824 125 aa9.38□□□□□ -0.91
SMPD4-213ENST00000454468 CKS2P33552 79 aa9.38□□□□□ -0.91
SMPD4-213ENST00000454468 PSG3Q16557 428 aa9.38□□□□□ -0.91
SMPD4-213ENST00000454468 OCIAD2Q56VL3 154 aa9.38□□□□□ -0.91
SMPD4-213ENST00000454468 PIP4P2Q8N4L2 257 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms