RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 UPK3BQ9BT76 320 aa4.1□□□□□ -1.75
HLA-DPA3-207ENST00000454398 GSN-AS1Q9NRJ2 163 aa4.1□□□□□ -1.75
HLA-DPA3-207ENST00000454398 MRPL16Q9NX20 251 aaKnown RBP4.1□□□□□ -1.75
HLA-DPA3-207ENST00000454398 SCP2D1Q9UJQ7 156 aa4.1□□□□□ -1.75
HLA-DPA3-207ENST00000454398 RABL2BQ9UNT1 228 aa4.1□□□□□ -1.75
HLA-DPA3-207ENST00000454398 KCNIP3Q9Y2W7 256 aa4.1□□□□□ -1.75
HLA-DPA3-207ENST00000454398 TRGV2A0A075B6R0 118 aa4.09□□□□□ -1.75
HLA-DPA3-207ENST00000454398 A0A087X0K7 114 aa4.09□□□□□ -1.75
HLA-DPA3-207ENST00000454398 LOC105371267A0A1B0GV96 52 aa4.09□□□□□ -1.75
HLA-DPA3-207ENST00000454398 SNURFLB1AK76 121 aa4.09□□□□□ -1.75
HLA-DPA3-207ENST00000454398 H3BQ15 152 aa4.09□□□□□ -1.75
HLA-DPA3-207ENST00000454398 H7BYZ3 331 aa4.09□□□□□ -1.75
HLA-DPA3-207ENST00000454398 M0R3E3 92 aa4.09□□□□□ -1.75
HLA-DPA3-207ENST00000454398 TSC22D2O75157 780 aa4.09□□□□□ -1.75
HLA-DPA3-207ENST00000454398 HYPMO75409 117 aa4.09□□□□□ -1.75
HLA-DPA3-207ENST00000454398 CT45A10P0DMU9 189 aa4.09□□□□□ -1.75
HLA-DPA3-207ENST00000454398 ANXA3P12429 323 aa4.09□□□□□ -1.75
HLA-DPA3-207ENST00000454398 ANXA7P20073 488 aaKnown RBP4.09□□□□□ -1.75
HLA-DPA3-207ENST00000454398 ERVFC1-1P60608 527 aa4.09□□□□□ -1.75
HLA-DPA3-207ENST00000454398 UBE2MP61081 183 aaKnown RBP4.09□□□□□ -1.75
HLA-DPA3-207ENST00000454398 MRPS10P82664 201 aaKnown RBP4.09□□□□□ -1.75
HLA-DPA3-207ENST00000454398 ERCC8Q13216 396 aa4.09□□□□□ -1.75
HLA-DPA3-207ENST00000454398 BTN1A1Q13410 526 aa4.09□□□□□ -1.75
HLA-DPA3-207ENST00000454398 OPCMLQ14982 345 aa4.09□□□□□ -1.75
HLA-DPA3-207ENST00000454398 PRR9Q5T870 116 aa4.09□□□□□ -1.75
HLA-DPA3-207ENST00000454398 CCDC28AQ8IWP9 274 aa4.09□□□□□ -1.75
HLA-DPA3-207ENST00000454398 IQCF2Q8IXL9 164 aa4.09□□□□□ -1.75
HLA-DPA3-207ENST00000454398 LYPD1Q8N2G4 141 aa4.09□□□□□ -1.75
HLA-DPA3-207ENST00000454398 TMEM256Q8N2U0 113 aa4.09□□□□□ -1.75
HLA-DPA3-207ENST00000454398 ENKURQ8TC29 256 aa4.09□□□□□ -1.75
HLA-DPA3-207ENST00000454398 ST6GAL2Q96JF0 529 aa4.09□□□□□ -1.75
HLA-DPA3-207ENST00000454398 C18orf15Q96N68 181 aa4.09□□□□□ -1.75
HLA-DPA3-207ENST00000454398 GPR82Q96P67 336 aa4.09□□□□□ -1.75
HLA-DPA3-207ENST00000454398 SOSTQ9BQB4 213 aa4.09□□□□□ -1.75
HLA-DPA3-207ENST00000454398 CCDC32Q9BV29 185 aa4.09□□□□□ -1.75
HLA-DPA3-207ENST00000454398 ARV1Q9H2C2 271 aa4.09□□□□□ -1.75
HLA-DPA3-207ENST00000454398 ZNF331Q9NQX6 463 aaPredicted RBP4.09□□□□□ -1.75
HLA-DPA3-207ENST00000454398 SLC45A2Q9UMX9 530 aa4.09□□□□□ -1.75
HLA-DPA3-207ENST00000454398 STRAPQ9Y3F4 350 aaKnown RBP4.09□□□□□ -1.75
HLA-DPA3-207ENST00000454398 A0A087WTM6 91 aa4.08□□□□□ -1.76
HLA-DPA3-207ENST00000454398 IGKV2-40A0A087WW87 121 aaPredicted RBP4.08□□□□□ -1.76
HLA-DPA3-207ENST00000454398 TRAV5A0A0B4J249 113 aa4.08□□□□□ -1.76
HLA-DPA3-207ENST00000454398 CTDSPLO15194 276 aa4.08□□□□□ -1.76
HLA-DPA3-207ENST00000454398 SFT2D2O95562 160 aa4.08□□□□□ -1.76
HLA-DPA3-207ENST00000454398 IGKV2D-40P01614 121 aaPredicted RBP4.08□□□□□ -1.76
HLA-DPA3-207ENST00000454398 BTF3P20290 206 aaKnown RBP4.08□□□□□ -1.76
HLA-DPA3-207ENST00000454398 B2MP61769 119 aa4.08□□□□□ -1.76
HLA-DPA3-207ENST00000454398 ARL16Q0P5N6 197 aa4.08□□□□□ -1.76
HLA-DPA3-207ENST00000454398 PYDC2Q56P42 97 aa4.08□□□□□ -1.76
HLA-DPA3-207ENST00000454398 LCN15Q6UWW0 184 aa4.08□□□□□ -1.76
HLA-DPA3-207ENST00000454398 LINC00305Q7Z4B0 112 aa4.08□□□□□ -1.76
HLA-DPA3-207ENST00000454398 NRARPQ7Z6K4 114 aa4.08□□□□□ -1.76
HLA-DPA3-207ENST00000454398 WFDC10BQ8IUB3 73 aa4.08□□□□□ -1.76
HLA-DPA3-207ENST00000454398 C11orf72Q8NBR9 251 aa4.08□□□□□ -1.76
HLA-DPA3-207ENST00000454398 Q8TAT8 98 aa4.08□□□□□ -1.76
HLA-DPA3-207ENST00000454398 C15orf40Q8WUR7 153 aa4.08□□□□□ -1.76
HLA-DPA3-207ENST00000454398 FRZBQ92765 325 aa4.08□□□□□ -1.76
HLA-DPA3-207ENST00000454398 C8orf49Q96NF6 230 aa4.08□□□□□ -1.76
HLA-DPA3-207ENST00000454398 CIB3Q96Q77 187 aaPredicted RBP4.08□□□□□ -1.76
HLA-DPA3-207ENST00000454398 MGST2Q99735 147 aa4.08□□□□□ -1.76
HLA-DPA3-207ENST00000454398 PSENENQ9NZ42 101 aa4.08□□□□□ -1.76
HLA-DPA3-207ENST00000454398 TP53TG3Q9ULZ0 132 aa4.08□□□□□ -1.76
HLA-DPA3-207ENST00000454398 FUT9Q9Y231 359 aa4.08□□□□□ -1.76
HLA-DPA3-207ENST00000454398 RCL1Q9Y2P8 373 aaKnown RBP4.08□□□□□ -1.76
HLA-DPA3-207ENST00000454398 KLF12Q9Y4X4 402 aa4.08□□□□□ -1.76
HLA-DPA3-207ENST00000454398 V9GYH0 126 aa4.08□□□□□ -1.76
HLA-DPA3-207ENST00000454398 DUXBA0A1W2PPF3 345 aa4.07□□□□□ -1.76
HLA-DPA3-207ENST00000454398 A0A1W2PPQ1 181 aa4.07□□□□□ -1.76
HLA-DPA3-207ENST00000454398 CCSO14618 274 aa4.07□□□□□ -1.76
HLA-DPA3-207ENST00000454398 AGPAT2O15120 278 aa4.07□□□□□ -1.76
HLA-DPA3-207ENST00000454398 SIVA1O15304 175 aa4.07□□□□□ -1.76
HLA-DPA3-207ENST00000454398 COX7A2P2O60397 106 aa4.07□□□□□ -1.76
HLA-DPA3-207ENST00000454398 MED6O75586 246 aa4.07□□□□□ -1.76
HLA-DPA3-207ENST00000454398 CFDP00746 253 aaPredicted RBP4.07□□□□□ -1.76
HLA-DPA3-207ENST00000454398 SFTA3P0C7M3 94 aa4.07□□□□□ -1.76
HLA-DPA3-207ENST00000454398 IGLC2P0DOY2 106 aa4.07□□□□□ -1.76
HLA-DPA3-207ENST00000454398 TNFSF8P32971 234 aa4.07□□□□□ -1.76
HLA-DPA3-207ENST00000454398 INPP1P49441 399 aa4.07□□□□□ -1.76
HLA-DPA3-207ENST00000454398 ICAM4Q14773 271 aa4.07□□□□□ -1.76
HLA-DPA3-207ENST00000454398 TMEM128Q5BJH2 165 aa4.07□□□□□ -1.76
HLA-DPA3-207ENST00000454398 TRIQKQ629K1 86 aa4.07□□□□□ -1.76
HLA-DPA3-207ENST00000454398 TEPPQ6URK8 271 aa4.07□□□□□ -1.76
HLA-DPA3-207ENST00000454398 ZNF493Q6ZR52 646 aa4.07□□□□□ -1.76
HLA-DPA3-207ENST00000454398 Q6ZSN1 163 aa4.07□□□□□ -1.76
HLA-DPA3-207ENST00000454398 LRTM2Q8N967 370 aa4.07□□□□□ -1.76
HLA-DPA3-207ENST00000454398 ZNF503Q96F45 646 aa4.07□□□□□ -1.76
HLA-DPA3-207ENST00000454398 CACFD1Q9UGQ2 172 aa4.07□□□□□ -1.76
HLA-DPA3-207ENST00000454398 FLVCR2Q9UPI3 526 aa4.07□□□□□ -1.76
HLA-DPA3-207ENST00000454398 ALG5Q9Y673 324 aa4.07□□□□□ -1.76
HLA-DPA3-207ENST00000454398 UBE2L5PA0A1B0GUS4 154 aa4.06□□□□□ -1.76
HLA-DPA3-207ENST00000454398 C7orf71A4D174 169 aa4.06□□□□□ -1.76
HLA-DPA3-207ENST00000454398 FABP12A6NFH5 140 aa4.06□□□□□ -1.76
HLA-DPA3-207ENST00000454398 NPIPB6E9PJ23 425 aa4.06□□□□□ -1.76
HLA-DPA3-207ENST00000454398 SMLR1H3BR10 107 aa4.06□□□□□ -1.76
HLA-DPA3-207ENST00000454398 PAX4O43316 350 aa4.06□□□□□ -1.76
HLA-DPA3-207ENST00000454398 PYYP10082 97 aa4.06□□□□□ -1.76
HLA-DPA3-207ENST00000454398 SLC25A6P12236 298 aa4.06□□□□□ -1.76
HLA-DPA3-207ENST00000454398 RNASE4P34096 147 aaKnown RBP4.06□□□□□ -1.76
HLA-DPA3-207ENST00000454398 ATP5IP56385 69 aaPredicted RBP4.06□□□□□ -1.76
HLA-DPA3-207ENST00000454398 RPP30P78346 268 aaKnown RBP4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms