RNA–Protein interactions for RNA: ENST00000453386.6

TRA2B-205, Transcript of transformer 2 beta homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRA2B, Length 2,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-205ENST00000453386 SEC11AP67812 179 aa12.34□□□□□ -0.43
TRA2B-205ENST00000453386 TWIST1Q15672 202 aa12.34□□□□□ -0.43
TRA2B-205ENST00000453386 MRPL51Q4U2R6 128 aaKnown RBP12.34□□□□□ -0.43
TRA2B-205ENST00000453386 WFDC3Q8IUB2 231 aa12.34□□□□□ -0.43
TRA2B-205ENST00000453386 PIP4P2Q8N4L2 257 aa12.34□□□□□ -0.43
TRA2B-205ENST00000453386 SRSF8Q9BRL6 282 aaKnown RBP12.34□□□□□ -0.43
TRA2B-205ENST00000453386 THYN1Q9P016 225 aa12.34□□□□□ -0.43
TRA2B-205ENST00000453386 ABCA4P78363 2273 aa12.34□□□□□ -0.43
TRA2B-205ENST00000453386 WI2-2373I1.2A0A1W2PRP0 233 aa12.34□□□□□ -0.43
TRA2B-205ENST00000453386 B9A039 149 aa12.34□□□□□ -0.43
TRA2B-205ENST00000453386 IGHV3-23P01764 117 aa12.34□□□□□ -0.43
TRA2B-205ENST00000453386 GAGE10A6NGK3 116 aa12.33□□□□□ -0.43
TRA2B-205ENST00000453386 LY6LH3BQJ8 138 aa12.33□□□□□ -0.43
TRA2B-205ENST00000453386 FGF6P10767 208 aa12.33□□□□□ -0.43
TRA2B-205ENST00000453386 S100A7AQ86SG5 101 aa12.33□□□□□ -0.43
TRA2B-205ENST00000453386 CSMD1Q96PZ7 3565 aa12.33□□□□□ -0.44
TRA2B-205ENST00000453386 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.33□□□□□ -0.44
TRA2B-205ENST00000453386 HBDP02042 147 aa12.33□□□□□ -0.44
TRA2B-205ENST00000453386 CD3EP07766 207 aa12.33□□□□□ -0.44
TRA2B-205ENST00000453386 IGFL4Q6B9Z1 124 aa12.33□□□□□ -0.44
TRA2B-205ENST00000453386 Q8TAT8 98 aa12.33□□□□□ -0.44
TRA2B-205ENST00000453386 TMEM190Q8WZ59 177 aa12.33□□□□□ -0.44
TRA2B-205ENST00000453386 NAA38Q9BRA0 125 aaKnown RBP12.33□□□□□ -0.44
TRA2B-205ENST00000453386 RAB1BQ9H0U4 201 aa12.33□□□□□ -0.44
TRA2B-205ENST00000453386 NPIPB5A8MRT5 1133 aa12.33□□□□□ -0.44
TRA2B-205ENST00000453386 MFAP4P55083 255 aa12.33□□□□□ -0.44
TRA2B-205ENST00000453386 PDE6HQ13956 83 aa12.33□□□□□ -0.44
TRA2B-205ENST00000453386 LGALS9BQ3B8N2 356 aa12.33□□□□□ -0.44
TRA2B-205ENST00000453386 LGALS9CQ6DKI2 356 aa12.33□□□□□ -0.44
TRA2B-205ENST00000453386 WNK2Q9Y3S1 2297 aa12.32□□□□□ -0.44
TRA2B-205ENST00000453386 U3KQK5 164 aa12.32□□□□□ -0.44
TRA2B-205ENST00000453386 PPBPP02775 128 aa12.32□□□□□ -0.44
TRA2B-205ENST00000453386 EGR2P11161 476 aaPredicted RBP12.32□□□□□ -0.44
TRA2B-205ENST00000453386 NMUP48645 174 aa12.32□□□□□ -0.44
TRA2B-205ENST00000453386 IFI27L1Q96BM0 104 aa12.32□□□□□ -0.44
TRA2B-205ENST00000453386 DPM3Q9P2X0 92 aa12.32□□□□□ -0.44
TRA2B-205ENST00000453386 ARHGAP32A7KAX9 2087 aa12.31□□□□□ -0.44
TRA2B-205ENST00000453386 A6NDN8 102 aa12.31□□□□□ -0.44
TRA2B-205ENST00000453386 NPYP01303 97 aa12.31□□□□□ -0.44
TRA2B-205ENST00000453386 OR1N2Q8NGR9 330 aa12.31□□□□□ -0.44
TRA2B-205ENST00000453386 IGHV3OR16-8A0A075B7F1 116 aa12.31□□□□□ -0.44
TRA2B-205ENST00000453386 A1L4Q6 167 aa12.31□□□□□ -0.44
TRA2B-205ENST00000453386 FER1L6-AS1Q8NA97 138 aa12.31□□□□□ -0.44
TRA2B-205ENST00000453386 PRR25Q96S07 402 aa12.31□□□□□ -0.44
TRA2B-205ENST00000453386 ZFHX2Q9C0A1 2572 aaPredicted RBP12.31□□□□□ -0.44
TRA2B-205ENST00000453386 BSNQ9UPA5 3926 aa12.31□□□□□ -0.44
TRA2B-205ENST00000453386 H3BUT2 72 aa12.3□□□□□ -0.44
TRA2B-205ENST00000453386 KLRD1Q13241 179 aa12.3□□□□□ -0.44
TRA2B-205ENST00000453386 PRSS57Q6UWY2 283 aa12.3□□□□□ -0.44
TRA2B-205ENST00000453386 BOD1L2Q8IYS8 172 aa12.3□□□□□ -0.44
TRA2B-205ENST00000453386 LINC01560Q8TB33 94 aa12.3□□□□□ -0.44
TRA2B-205ENST00000453386 DPF1Q92782 380 aa12.3□□□□□ -0.44
TRA2B-205ENST00000453386 C18orf15Q96N68 181 aa12.3□□□□□ -0.44
TRA2B-205ENST00000453386 SMAD7O15105 426 aaKnown RBP12.3□□□□□ -0.44
TRA2B-205ENST00000453386 LY6HO94772 140 aa12.3□□□□□ -0.44
TRA2B-205ENST00000453386 PRR30Q53SZ7 412 aaPredicted RBP12.3□□□□□ -0.44
TRA2B-205ENST00000453386 FANCD2OSQ96PS1 177 aa12.3□□□□□ -0.44
TRA2B-205ENST00000453386 VGLL1Q99990 258 aa12.3□□□□□ -0.44
TRA2B-205ENST00000453386 IGHV3-35A0A0C4DH35 117 aa12.3□□□□□ -0.44
TRA2B-205ENST00000453386 NCBP2LA6PVI3 153 aaKnown RBP12.3□□□□□ -0.44
TRA2B-205ENST00000453386 K7ERU9 68 aa12.3□□□□□ -0.44
TRA2B-205ENST00000453386 ORM1P02763 201 aa12.3□□□□□ -0.44
TRA2B-205ENST00000453386 RAB37Q96AX2 223 aa12.3□□□□□ -0.44
TRA2B-205ENST00000453386 LRBAP50851 2863 aa12.3□□□□□ -0.44
TRA2B-205ENST00000453386 RPL7P18124 248 aaKnown RBP12.29□□□□□ -0.44
TRA2B-205ENST00000453386 ZNF80P51504 273 aaPredicted RBP12.29□□□□□ -0.44
TRA2B-205ENST00000453386 PCP2Q8IVA1 136 aa12.29□□□□□ -0.44
TRA2B-205ENST00000453386 Q8NA96 180 aa12.29□□□□□ -0.44
TRA2B-205ENST00000453386 C21orf62Q9NYP8 219 aa12.29□□□□□ -0.44
TRA2B-205ENST00000453386 MSRB1Q9NZV6 116 aa12.29□□□□□ -0.44
TRA2B-205ENST00000453386 DKK2Q9UBU2 259 aa12.29□□□□□ -0.44
TRA2B-205ENST00000453386 HLA-DMBP28068 263 aa12.29□□□□□ -0.44
TRA2B-205ENST00000453386 KIR3DS1Q14943 382 aa12.29□□□□□ -0.44
TRA2B-205ENST00000453386 C5orf64Q2M2E5 130 aa12.28□□□□□ -0.44
TRA2B-205ENST00000453386 ZNF672Q499Z4 452 aaPredicted RBP12.28□□□□□ -0.44
TRA2B-205ENST00000453386 GTF2H5Q6ZYL4 71 aa12.28□□□□□ -0.44
TRA2B-205ENST00000453386 IGLV11-55A0A075B6I3 123 aa12.28□□□□□ -0.44
TRA2B-205ENST00000453386 C9orf118A6NHY6 69 aa12.28□□□□□ -0.44
TRA2B-205ENST00000453386 H3BRM9 83 aa12.28□□□□□ -0.44
TRA2B-205ENST00000453386 NDUFS7O75251 213 aa12.28□□□□□ -0.44
TRA2B-205ENST00000453386 BMI1P35226 326 aa12.28□□□□□ -0.44
TRA2B-205ENST00000453386 CEACAM3P40198 252 aa12.27□□□□□ -0.44
TRA2B-205ENST00000453386 HSD52Q0P140 79 aa12.27□□□□□ -0.44
TRA2B-205ENST00000453386 SMIM15Q7Z3B0 74 aa12.27□□□□□ -0.44
TRA2B-205ENST00000453386 OR9G4Q8NGQ1 327 aa12.27□□□□□ -0.44
TRA2B-205ENST00000453386 CFHR4Q92496 578 aa12.27□□□□□ -0.44
TRA2B-205ENST00000453386 ZNF292O60281 2723 aa12.27□□□□□ -0.45
TRA2B-205ENST00000453386 F8W735 103 aaPredicted RBP12.27□□□□□ -0.45
TRA2B-205ENST00000453386 NPBQ8NG41 125 aa12.27□□□□□ -0.45
TRA2B-205ENST00000453386 ARPC1AQ92747 370 aa12.27□□□□□ -0.45
TRA2B-205ENST00000453386 JMJD8Q96S16 334 aa12.27□□□□□ -0.45
TRA2B-205ENST00000453386 SAP30O75446 220 aa12.27□□□□□ -0.45
TRA2B-205ENST00000453386 NDUFA3O95167 84 aa12.27□□□□□ -0.45
TRA2B-205ENST00000453386 PAX8Q06710 450 aa12.27□□□□□ -0.45
TRA2B-205ENST00000453386 TM4SF20Q53R12 229 aa12.27□□□□□ -0.45
TRA2B-205ENST00000453386 A0A0G2JLM5 398 aa12.26□□□□□ -0.45
TRA2B-205ENST00000453386 NDPQ00604 133 aa12.26□□□□□ -0.45
TRA2B-205ENST00000453386 COL25A1Q9BXS0 654 aaPredicted RBP12.26□□□□□ -0.45
TRA2B-205ENST00000453386 MEGF9Q9H1U4 602 aa12.26□□□□□ -0.45
TRA2B-205ENST00000453386 ANKHD1Q8IWZ3 2542 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms