RNA–Protein interactions for RNA: ENST00000452776.1

SMCO1-202, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

TSL 1 (best)

Gene SMCO1, Length 1,846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-202ENST00000452776 Q8N1Y9 231 aa6.62□□□□□ -1.35
SMCO1-202ENST00000452776 SRSF8Q9BRL6 282 aaKnown RBP6.62□□□□□ -1.35
SMCO1-202ENST00000452776 PRADC1Q9BSG0 188 aa6.62□□□□□ -1.35
SMCO1-202ENST00000452776 OBP2BQ9NPH6 170 aa6.62□□□□□ -1.35
SMCO1-202ENST00000452776 ZNF71Q9NQZ8 489 aaPredicted RBP6.62□□□□□ -1.35
SMCO1-202ENST00000452776 LTBP2Q14767 1821 aa6.61□□□□□ -1.35
SMCO1-202ENST00000452776 C2orf16Q68DN1 1984 aa6.61□□□□□ -1.35
SMCO1-202ENST00000452776 RP1P56715 2156 aa6.61□□□□□ -1.35
SMCO1-202ENST00000452776 A4D1N5 150 aa6.61□□□□□ -1.35
SMCO1-202ENST00000452776 NPFFO15130 113 aa6.61□□□□□ -1.35
SMCO1-202ENST00000452776 CRLF1O75462 422 aa6.61□□□□□ -1.35
SMCO1-202ENST00000452776 CD7P09564 240 aa6.61□□□□□ -1.35
SMCO1-202ENST00000452776 SLC25A16P16260 332 aa6.61□□□□□ -1.35
SMCO1-202ENST00000452776 TNFAIP6P98066 277 aaPredicted RBP6.61□□□□□ -1.35
SMCO1-202ENST00000452776 FAM53AQ6NSI3 398 aaPredicted RBP6.61□□□□□ -1.35
SMCO1-202ENST00000452776 SCGB1D4Q6XE38 83 aa6.61□□□□□ -1.35
SMCO1-202ENST00000452776 LINC00526Q96FQ7 95 aa6.61□□□□□ -1.35
SMCO1-202ENST00000452776 SCNM1Q9BWG6 230 aa6.61□□□□□ -1.35
SMCO1-202ENST00000452776 C21orf62Q9NYP8 219 aa6.61□□□□□ -1.35
SMCO1-202ENST00000452776 CALYQ9NYX4 217 aa6.61□□□□□ -1.35
SMCO1-202ENST00000452776 PTPRSQ13332 1948 aa6.61□□□□□ -1.35
SMCO1-202ENST00000452776 C5orf67F2Z3F1 127 aa6.6□□□□□ -1.35
SMCO1-202ENST00000452776 LGALS9O00182 355 aa6.6□□□□□ -1.35
SMCO1-202ENST00000452776 TIMM23O14925 209 aa6.6□□□□□ -1.35
SMCO1-202ENST00000452776 SCRG1O75711 98 aa6.6□□□□□ -1.35
SMCO1-202ENST00000452776 LINC00694P0DN24 101 aa6.6□□□□□ -1.35
SMCO1-202ENST00000452776 ZNF134P52741 427 aa6.6□□□□□ -1.35
SMCO1-202ENST00000452776 HERVK_113P61574 105 aa6.6□□□□□ -1.35
SMCO1-202ENST00000452776 PCOLCEQ15113 449 aa6.6□□□□□ -1.35
SMCO1-202ENST00000452776 C9orf153Q5TBE3 101 aa6.6□□□□□ -1.35
SMCO1-202ENST00000452776 C11orf53Q8IXP5 236 aa6.6□□□□□ -1.35
SMCO1-202ENST00000452776 ZNRF2Q8NHG8 242 aa6.6□□□□□ -1.35
SMCO1-202ENST00000452776 ODF3Q96PU9 254 aa6.6□□□□□ -1.35
SMCO1-202ENST00000452776 CNFNQ9BYD5 112 aa6.6□□□□□ -1.35
SMCO1-202ENST00000452776 DNAH12Q6ZR08 3092 aa6.6□□□□□ -1.35
SMCO1-202ENST00000452776 RTTNQ86VV8 2226 aa6.6□□□□□ -1.35
SMCO1-202ENST00000452776 TRAV8-1A0A0A6YYK1 113 aa6.6□□□□□ -1.35
SMCO1-202ENST00000452776 TRBV10-2A0A0K0K1G8 114 aa6.6□□□□□ -1.35
SMCO1-202ENST00000452776 SAA2P0DJI9 122 aaPredicted RBP6.6□□□□□ -1.35
SMCO1-202ENST00000452776 EMP1P54849 157 aa6.6□□□□□ -1.35
SMCO1-202ENST00000452776 TMEM170BQ5T4T1 132 aa6.6□□□□□ -1.35
SMCO1-202ENST00000452776 PVRIGQ6DKI7 326 aa6.6□□□□□ -1.35
SMCO1-202ENST00000452776 WFDC3Q8IUB2 231 aa6.6□□□□□ -1.35
SMCO1-202ENST00000452776 C1orf162Q8NEQ5 155 aaPredicted RBP6.6□□□□□ -1.35
SMCO1-202ENST00000452776 TMEM167AQ8TBQ9 72 aa6.6□□□□□ -1.35
SMCO1-202ENST00000452776 IMMP1LQ96LU5 166 aa6.6□□□□□ -1.35
SMCO1-202ENST00000452776 KRTAP4-8Q9BYQ9 185 aa6.6□□□□□ -1.35
SMCO1-202ENST00000452776 SPRY4Q9C004 299 aa6.6□□□□□ -1.35
SMCO1-202ENST00000452776 EML6Q6ZMW3 1958 aa6.59□□□□□ -1.35
SMCO1-202ENST00000452776 ZNF815PA8K554 130 aa6.59□□□□□ -1.35
SMCO1-202ENST00000452776 H3BMM0 161 aa6.59□□□□□ -1.35
SMCO1-202ENST00000452776 K7ESF4 209 aa6.59□□□□□ -1.35
SMCO1-202ENST00000452776 NDUFA3O95167 84 aa6.59□□□□□ -1.35
SMCO1-202ENST00000452776 TGFAP01135 160 aa6.59□□□□□ -1.35
SMCO1-202ENST00000452776 IGHV3-9P01782 118 aa6.59□□□□□ -1.35
SMCO1-202ENST00000452776 CGB3P0DN86 165 aa6.59□□□□□ -1.35
SMCO1-202ENST00000452776 CGB7P0DN87 165 aa6.59□□□□□ -1.35
SMCO1-202ENST00000452776 GLRXP35754 106 aa6.59□□□□□ -1.35
SMCO1-202ENST00000452776 FXYD7P58549 80 aa6.59□□□□□ -1.35
SMCO1-202ENST00000452776 HOXA4Q00056 320 aaPredicted RBP6.59□□□□□ -1.35
SMCO1-202ENST00000452776 PDE6HQ13956 83 aa6.59□□□□□ -1.35
SMCO1-202ENST00000452776 ORMDL2Q53FV1 153 aa6.59□□□□□ -1.35
SMCO1-202ENST00000452776 C4orf48Q5BLP8 95 aa6.59□□□□□ -1.35
SMCO1-202ENST00000452776 BAALCQ8WXS3 180 aa6.59□□□□□ -1.35
SMCO1-202ENST00000452776 UBE2WQ96B02 151 aa6.59□□□□□ -1.35
SMCO1-202ENST00000452776 USF3Q68DE3 2245 aa6.58□□□□□ -1.36
SMCO1-202ENST00000452776 TRBV19A0A075B6N1 114 aa6.58□□□□□ -1.36
SMCO1-202ENST00000452776 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.58□□□□□ -1.36
SMCO1-202ENST00000452776 TM4SF5O14894 197 aa6.58□□□□□ -1.36
SMCO1-202ENST00000452776 CD40P25942 277 aa6.58□□□□□ -1.36
SMCO1-202ENST00000452776 CRIP1P50238 77 aa6.58□□□□□ -1.36
SMCO1-202ENST00000452776 CFHR1Q03591 330 aa6.58□□□□□ -1.36
SMCO1-202ENST00000452776 EDDM3AQ14507 147 aa6.58□□□□□ -1.36
SMCO1-202ENST00000452776 DEFB133Q30KQ1 61 aa6.58□□□□□ -1.36
SMCO1-202ENST00000452776 DEFB121Q5J5C9 76 aa6.58□□□□□ -1.36
SMCO1-202ENST00000452776 MRPL14Q6P1L8 145 aaKnown RBP6.58□□□□□ -1.36
SMCO1-202ENST00000452776 Q71RC1 249 aaPredicted RBP6.58□□□□□ -1.36
SMCO1-202ENST00000452776 FAM19A5Q7Z5A7 132 aaPredicted RBP6.58□□□□□ -1.36
SMCO1-202ENST00000452776 TMSB15BA0A087X1C1 80 aa6.57□□□□□ -1.36
SMCO1-202ENST00000452776 H3BT86 120 aa6.57□□□□□ -1.36
SMCO1-202ENST00000452776 WNT9BO14905 357 aa6.57□□□□□ -1.36
SMCO1-202ENST00000452776 CECR9P0C854 216 aa6.57□□□□□ -1.36
SMCO1-202ENST00000452776 IGLC6P0CF74 106 aa6.57□□□□□ -1.36
SMCO1-202ENST00000452776 SAA1P0DJI8 122 aaPredicted RBP6.57□□□□□ -1.36
SMCO1-202ENST00000452776 MFAP4P55083 255 aa6.57□□□□□ -1.36
SMCO1-202ENST00000452776 PMVKQ15126 192 aa6.57□□□□□ -1.36
SMCO1-202ENST00000452776 TEX36Q5VZQ5 186 aa6.57□□□□□ -1.36
SMCO1-202ENST00000452776 CD177Q8N6Q3 437 aa6.57□□□□□ -1.36
SMCO1-202ENST00000452776 NTN5Q8WTR8 489 aaPredicted RBP6.57□□□□□ -1.36
SMCO1-202ENST00000452776 RNF185Q96GF1 192 aa6.57□□□□□ -1.36
SMCO1-202ENST00000452776 LINC00574Q9H8X3 128 aa6.57□□□□□ -1.36
SMCO1-202ENST00000452776 CEP192Q8TEP8 1941 aa6.57□□□□□ -1.36
SMCO1-202ENST00000452776 IGLV2-18A0A075B6J9 118 aa6.57□□□□□ -1.36
SMCO1-202ENST00000452776 SH2D1AO60880 128 aa6.57□□□□□ -1.36
SMCO1-202ENST00000452776 PLAUP00749 431 aa6.57□□□□□ -1.36
SMCO1-202ENST00000452776 CFC1BP0CG36 223 aa6.57□□□□□ -1.36
SMCO1-202ENST00000452776 CFC1P0CG37 223 aa6.57□□□□□ -1.36
SMCO1-202ENST00000452776 HERVK_113P63121 156 aa6.57□□□□□ -1.36
SMCO1-202ENST00000452776 TFF2Q03403 129 aa6.57□□□□□ -1.36
SMCO1-202ENST00000452776 ALKBH6Q3KRA9 238 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms