RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 RPL29P47914 159 aaKnown RBP6.9□□□□□ -1.3
USP54-207ENST00000451492 TCTAP57738 103 aa6.9□□□□□ -1.3
USP54-207ENST00000451492 KIR3DS1Q14943 382 aa6.9□□□□□ -1.3
USP54-207ENST00000451492 FCN2Q15485 313 aa6.9□□□□□ -1.3
USP54-207ENST00000451492 ATP6V1FQ16864 119 aa6.9□□□□□ -1.3
USP54-207ENST00000451492 OR10J6PQ8NGY7 276 aa6.9□□□□□ -1.3
USP54-207ENST00000451492 LINC01587Q99440 93 aa6.9□□□□□ -1.3
USP54-207ENST00000451492 SMIM3Q9BZL3 60 aa6.9□□□□□ -1.3
USP54-207ENST00000451492 NMES1Q9C002 83 aa6.9□□□□□ -1.3
USP54-207ENST00000451492 SLC25A31Q9H0C2 315 aa6.9□□□□□ -1.3
USP54-207ENST00000451492 ZNF586Q9NXT0 402 aa6.9□□□□□ -1.3
USP54-207ENST00000451492 TEX48A0A1B0GUV7 120 aa6.89□□□□□ -1.31
USP54-207ENST00000451492 DEFB130BP0DP73 79 aa6.89□□□□□ -1.31
USP54-207ENST00000451492 DEFB130AP0DP74 79 aa6.89□□□□□ -1.31
USP54-207ENST00000451492 CDKN1BP46527 198 aa6.89□□□□□ -1.31
USP54-207ENST00000451492 H2BFSP57053 126 aa6.89□□□□□ -1.31
USP54-207ENST00000451492 UBE2DNLQ8IWF7 75 aa6.89□□□□□ -1.31
USP54-207ENST00000451492 PPP1R1CQ8WVI7 109 aa6.89□□□□□ -1.31
USP54-207ENST00000451492 M0R3E3 92 aa6.88□□□□□ -1.31
USP54-207ENST00000451492 ERCC8Q13216 396 aa6.88□□□□□ -1.31
USP54-207ENST00000451492 MIR17HGQ75NE6 70 aa6.88□□□□□ -1.31
USP54-207ENST00000451492 EXOC3-AS1Q8N2X6 119 aa6.88□□□□□ -1.31
USP54-207ENST00000451492 SAT2Q96F10 170 aaPredicted RBP6.88□□□□□ -1.31
USP54-207ENST00000451492 MARVELD1Q9BSK0 173 aa6.88□□□□□ -1.31
USP54-207ENST00000451492 SLC25A2Q9BXI2 301 aa6.88□□□□□ -1.31
USP54-207ENST00000451492 TIMM9Q9Y5J7 89 aa6.88□□□□□ -1.31
USP54-207ENST00000451492 HECTD4Q9Y4D8 3996 aa6.87□□□□□ -1.31
USP54-207ENST00000451492 TRBV19A0A075B6N1 114 aa6.87□□□□□ -1.31
USP54-207ENST00000451492 M0R2N4 97 aa6.87□□□□□ -1.31
USP54-207ENST00000451492 MPDU1O75352 247 aa6.87□□□□□ -1.31
USP54-207ENST00000451492 MPC2O95563 127 aa6.87□□□□□ -1.31
USP54-207ENST00000451492 OR10J4P0C629 311 aa6.87□□□□□ -1.31
USP54-207ENST00000451492 PET100P0DJ07 73 aa6.87□□□□□ -1.31
USP54-207ENST00000451492 CYCSP99999 105 aaKnown RBP6.87□□□□□ -1.31
USP54-207ENST00000451492 GUK1Q16774 197 aa6.87□□□□□ -1.31
USP54-207ENST00000451492 GFI1BQ5VTD9 330 aa6.87□□□□□ -1.31
USP54-207ENST00000451492 FAM122CQ6P4D5 195 aa6.87□□□□□ -1.31
USP54-207ENST00000451492 TMEM88Q6PEY1 159 aa6.87□□□□□ -1.31
USP54-207ENST00000451492 TMEM256Q8N2U0 113 aa6.87□□□□□ -1.31
USP54-207ENST00000451492 C16orf74Q96GX8 76 aa6.87□□□□□ -1.31
USP54-207ENST00000451492 ATP5SQ99766 215 aa6.87□□□□□ -1.31
USP54-207ENST00000451492 WDR61Q9GZS3 305 aaKnown RBP6.87□□□□□ -1.31
USP54-207ENST00000451492 BATF3Q9NR55 127 aa6.87□□□□□ -1.31
USP54-207ENST00000451492 MBD2Q9UBB5 411 aa6.87□□□□□ -1.31
USP54-207ENST00000451492 NACAE9PAV3 2078 aa6.86□□□□□ -1.31
USP54-207ENST00000451492 IGLV2-18A0A075B6J9 118 aa6.86□□□□□ -1.31
USP54-207ENST00000451492 IGKV2-40A0A087WW87 121 aaPredicted RBP6.86□□□□□ -1.31
USP54-207ENST00000451492 TRAV12-3A0A0B4J271 114 aa6.86□□□□□ -1.31
USP54-207ENST00000451492 C17orf112F2Z3M2 114 aa6.86□□□□□ -1.31
USP54-207ENST00000451492 F5H768 121 aa6.86□□□□□ -1.31
USP54-207ENST00000451492 OR7C2O60412 319 aa6.86□□□□□ -1.31
USP54-207ENST00000451492 EIF3GO75821 320 aaKnown RBP eCLIP6.86□□□□□ -1.31
USP54-207ENST00000451492 IGKV2D-40P01614 121 aaPredicted RBP6.86□□□□□ -1.31
USP54-207ENST00000451492 P0DMU3 169 aa6.86□□□□□ -1.31
USP54-207ENST00000451492 FAM231AP0DMU4 169 aa6.86□□□□□ -1.31
USP54-207ENST00000451492 FAM231CP0DMU5 169 aa6.86□□□□□ -1.31
USP54-207ENST00000451492 CT45A10P0DMU9 189 aa6.86□□□□□ -1.31
USP54-207ENST00000451492 LEPP41159 167 aa6.86□□□□□ -1.31
USP54-207ENST00000451492 NOP10Q9NPE3 64 aaKnown RBP6.86□□□□□ -1.31
USP54-207ENST00000451492 HSPB11Q9Y547 144 aa6.86□□□□□ -1.31
USP54-207ENST00000451492 ALG5Q9Y673 324 aa6.86□□□□□ -1.31
USP54-207ENST00000451492 PLAC8L1A1L4L8 177 aa6.85□□□□□ -1.31
USP54-207ENST00000451492 LYRM9A8MSI8 78 aa6.85□□□□□ -1.31
USP54-207ENST00000451492 NPIPB6E9PJ23 425 aa6.85□□□□□ -1.31
USP54-207ENST00000451492 H7BYZ3 331 aa6.85□□□□□ -1.31
USP54-207ENST00000451492 NDUFB4O95168 129 aa6.85□□□□□ -1.31
USP54-207ENST00000451492 HIST1H1EP10412 219 aaKnown RBP6.85□□□□□ -1.31
USP54-207ENST00000451492 RPL12P30050 165 aaKnown RBP6.85□□□□□ -1.31
USP54-207ENST00000451492 TSPOP30536 169 aa6.85□□□□□ -1.31
USP54-207ENST00000451492 TAS2R60P59551 318 aa6.85□□□□□ -1.31
USP54-207ENST00000451492 BTN1A1Q13410 526 aa6.85□□□□□ -1.31
USP54-207ENST00000451492 ICAM4Q14773 271 aa6.85□□□□□ -1.31
USP54-207ENST00000451492 FFAR4Q5NUL3 377 aa6.85□□□□□ -1.31
USP54-207ENST00000451492 POM121L12Q8N7R1 296 aa6.85□□□□□ -1.31
USP54-207ENST00000451492 CHAC2Q8WUX2 184 aa6.85□□□□□ -1.31
USP54-207ENST00000451492 PHYHIPLQ96FC7 376 aa6.85□□□□□ -1.31
USP54-207ENST00000451492 PAXXQ9BUH6 204 aa6.85□□□□□ -1.31
USP54-207ENST00000451492 AAMDCQ9H7C9 122 aa6.85□□□□□ -1.31
USP54-207ENST00000451492 KCNIP2Q9NS61 270 aa6.85□□□□□ -1.31
USP54-207ENST00000451492 TMEM14CQ9P0S9 112 aa6.85□□□□□ -1.31
USP54-207ENST00000451492 ZNF253O75346 499 aa6.84□□□□□ -1.31
USP54-207ENST00000451492 NUDT3O95989 172 aa6.84□□□□□ -1.31
USP54-207ENST00000451492 IFNA5P01569 189 aa6.84□□□□□ -1.31
USP54-207ENST00000451492 OXA1LQ15070 435 aa6.84□□□□□ -1.31
USP54-207ENST00000451492 CCDC28AQ8IWP9 274 aa6.84□□□□□ -1.31
USP54-207ENST00000451492 SCGB1C1Q8TD33 95 aa6.84□□□□□ -1.31
USP54-207ENST00000451492 RNASE8Q8TDE3 154 aaKnown RBP6.84□□□□□ -1.31
USP54-207ENST00000451492 TMEM263Q8WUH6 116 aaKnown RBP6.84□□□□□ -1.31
USP54-207ENST00000451492 FAM167A-AS1Q96KT0 104 aa6.84□□□□□ -1.31
USP54-207ENST00000451492 MRPL32Q9BYC8 188 aaKnown RBP6.84□□□□□ -1.31
USP54-207ENST00000451492 OR51M1Q9H341 326 aa6.84□□□□□ -1.31
USP54-207ENST00000451492 RPH3ALQ9UNE2 315 aa6.84□□□□□ -1.31
USP54-207ENST00000451492 FUT9Q9Y231 359 aa6.84□□□□□ -1.31
USP54-207ENST00000451492 TIMM8BQ9Y5J9 83 aaPredicted RBP6.84□□□□□ -1.31
USP54-207ENST00000451492 GAGE12BA1L429 117 aa6.83□□□□□ -1.32
USP54-207ENST00000451492 SNURFLB1AK76 121 aa6.83□□□□□ -1.32
USP54-207ENST00000451492 GAGE7O76087 117 aa6.83□□□□□ -1.32
USP54-207ENST00000451492 ATP5G1P05496 136 aa6.83□□□□□ -1.32
USP54-207ENST00000451492 GAGE12FP0CL80 117 aa6.83□□□□□ -1.32
USP54-207ENST00000451492 GAGE12GP0CL81 117 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 161.3 ms