RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 IGLC2P0DOY2 106 aa18.96■□□□□ 0.63
USP42-204ENST00000451154 CAV2P51636 162 aa18.96■□□□□ 0.63
USP42-204ENST00000451154 RAB31Q13636 194 aa18.96■□□□□ 0.63
USP42-204ENST00000451154 Q6ZRG5 221 aa18.96■□□□□ 0.63
USP42-204ENST00000451154 TMEM263Q8WUH6 116 aaKnown RBP18.96■□□□□ 0.63
USP42-204ENST00000451154 SAT2Q96F10 170 aaPredicted RBP18.96■□□□□ 0.63
USP42-204ENST00000451154 SEC22CQ9BRL7 303 aa18.96■□□□□ 0.63
USP42-204ENST00000451154 LINC00588Q9Y4M8 146 aa18.96■□□□□ 0.63
USP42-204ENST00000451154 NBDYA0A0U1RRE5 68 aa18.95■□□□□ 0.62
USP42-204ENST00000451154 CCL18P55774 89 aa18.95■□□□□ 0.62
USP42-204ENST00000451154 GFI1BQ5VTD9 330 aa18.95■□□□□ 0.62
USP42-204ENST00000451154 PXMP4Q9Y6I8 212 aa18.95■□□□□ 0.62
USP42-204ENST00000451154 J3KRW8 73 aa18.94■□□□□ 0.62
USP42-204ENST00000451154 ZNF431Q8TF32 576 aaPredicted RBP18.94■□□□□ 0.62
USP42-204ENST00000451154 C20orf144Q9BQM9 153 aa18.94■□□□□ 0.62
USP42-204ENST00000451154 C11orf1Q9H5F2 150 aa18.94■□□□□ 0.62
USP42-204ENST00000451154 CT45A10P0DMU9 189 aa18.93■□□□□ 0.62
USP42-204ENST00000451154 TNP2Q05952 138 aa18.93■□□□□ 0.62
USP42-204ENST00000451154 OR5I1Q13606 314 aa18.93■□□□□ 0.62
USP42-204ENST00000451154 CCDC28AQ8IWP9 274 aa18.93■□□□□ 0.62
USP42-204ENST00000451154 UQCC1Q9NVA1 299 aa18.93■□□□□ 0.62
USP42-204ENST00000451154 WDR83OSQ9Y284 106 aa18.93■□□□□ 0.62
USP42-204ENST00000451154 CLINT1Q14677 625 aa18.92■□□□□ 0.62
USP42-204ENST00000451154 C2orf50Q96LR7 162 aa18.92■□□□□ 0.62
USP42-204ENST00000451154 ABCA13Q86UQ4 5058 aa18.91■□□□□ 0.62
USP42-204ENST00000451154 C12orf45Q8N5I9 185 aaPredicted RBP18.91■□□□□ 0.62
USP42-204ENST00000451154 OR1L4Q8NGR5 311 aa18.91■□□□□ 0.62
USP42-204ENST00000451154 NUDT15Q9NV35 164 aa18.91■□□□□ 0.62
USP42-204ENST00000451154 ZNF586Q9NXT0 402 aa18.91■□□□□ 0.62
USP42-204ENST00000451154 TRAV12-3A0A0B4J271 114 aa18.9■□□□□ 0.62
USP42-204ENST00000451154 GUK1Q16774 197 aa18.9■□□□□ 0.62
USP42-204ENST00000451154 SSX7Q7RTT5 188 aa18.9■□□□□ 0.62
USP42-204ENST00000451154 C6orf223Q8N319 242 aa18.9■□□□□ 0.62
USP42-204ENST00000451154 TRAV26-1A0A087WT03 109 aa18.89■□□□□ 0.61
USP42-204ENST00000451154 GAGE12BA1L429 117 aa18.89■□□□□ 0.61
USP42-204ENST00000451154 GAGE7O76087 117 aa18.89■□□□□ 0.61
USP42-204ENST00000451154 GAGE12FP0CL80 117 aa18.89■□□□□ 0.61
USP42-204ENST00000451154 GAGE12GP0CL81 117 aa18.89■□□□□ 0.61
USP42-204ENST00000451154 GAGE12IP0CL82 117 aa18.89■□□□□ 0.61
USP42-204ENST00000451154 S100A10P60903 97 aa18.89■□□□□ 0.61
USP42-204ENST00000451154 LINC00612Q8N6U2 182 aa18.89■□□□□ 0.61
USP42-204ENST00000451154 SLC39A9Q9NUM3 307 aa18.89■□□□□ 0.61
USP42-204ENST00000451154 A0A0J9YY99 117 aa18.88■□□□□ 0.61
USP42-204ENST00000451154 PVALBP20472 110 aaPredicted RBP18.88■□□□□ 0.61
USP42-204ENST00000451154 LEPP41159 167 aa18.88■□□□□ 0.61
USP42-204ENST00000451154 VWC2Q2TAL6 325 aa18.88■□□□□ 0.61
USP42-204ENST00000451154 GNPNAT1Q96EK6 184 aaPredicted RBP18.88■□□□□ 0.61
USP42-204ENST00000451154 PFDN5Q99471 154 aa18.88■□□□□ 0.61
USP42-204ENST00000451154 UBE2L5PA0A1B0GUS4 154 aa18.87■□□□□ 0.61
USP42-204ENST00000451154 IGSF23A1L1A6 192 aa18.87■□□□□ 0.61
USP42-204ENST00000451154 NPIPB6E9PJ23 425 aa18.87■□□□□ 0.61
USP42-204ENST00000451154 HOXA5P20719 270 aa18.87■□□□□ 0.61
USP42-204ENST00000451154 S100A11P31949 105 aa18.87■□□□□ 0.61
USP42-204ENST00000451154 RPL29P47914 159 aaKnown RBP18.87■□□□□ 0.61
USP42-204ENST00000451154 SULT1A1P50225 295 aa18.87■□□□□ 0.61
USP42-204ENST00000451154 BAXQ07812 192 aa18.87■□□□□ 0.61
USP42-204ENST00000451154 LYRM2Q9NU23 88 aaPredicted RBP18.87■□□□□ 0.61
USP42-204ENST00000451154 SNURFLB1AK76 121 aa18.86■□□□□ 0.61
USP42-204ENST00000451154 RLN2P04090 185 aa18.86■□□□□ 0.61
USP42-204ENST00000451154 H2AFB2P0C5Z0 115 aa18.86■□□□□ 0.61
USP42-204ENST00000451154 ERCC8Q13216 396 aa18.86■□□□□ 0.61
USP42-204ENST00000451154 IL15RAQ13261 267 aa18.86■□□□□ 0.61
USP42-204ENST00000451154 RAB32Q13637 225 aa18.86■□□□□ 0.61
USP42-204ENST00000451154 TMEM252Q8N6L7 170 aa18.86■□□□□ 0.61
USP42-204ENST00000451154 RXFP4Q8TDU9 374 aa18.86■□□□□ 0.61
USP42-204ENST00000451154 ODF3Q96PU9 254 aa18.86■□□□□ 0.61
USP42-204ENST00000451154 Q9H8V8 135 aa18.86■□□□□ 0.61
USP42-204ENST00000451154 HSPG2P98160 4391 aa18.85■□□□□ 0.61
USP42-204ENST00000451154 M6PRP20645 277 aa18.85■□□□□ 0.61
USP42-204ENST00000451154 LRP1BQ9NZR2 4599 aa18.84■□□□□ 0.61
USP42-204ENST00000451154 TRBV19A0A075B6N1 114 aa18.84■□□□□ 0.61
USP42-204ENST00000451154 M0R3E3 92 aa18.84■□□□□ 0.61
USP42-204ENST00000451154 ZNF253O75346 499 aa18.83■□□□□ 0.6
USP42-204ENST00000451154 FGF7P21781 194 aa18.83■□□□□ 0.6
USP42-204ENST00000451154 STX12Q86Y82 276 aa18.83■□□□□ 0.6
USP42-204ENST00000451154 CHAC2Q8WUX2 184 aa18.83■□□□□ 0.6
USP42-204ENST00000451154 PYGO2Q9BRQ0 406 aa18.83■□□□□ 0.6
USP42-204ENST00000451154 C16orf90A8MZG2 172 aa18.82■□□□□ 0.6
USP42-204ENST00000451154 NDUFB4O95168 129 aa18.82■□□□□ 0.6
USP42-204ENST00000451154 HBG1P69891 147 aa18.82■□□□□ 0.6
USP42-204ENST00000451154 HBG2P69892 147 aa18.82■□□□□ 0.6
USP42-204ENST00000451154 Q6ZTI0 123 aa18.82■□□□□ 0.6
USP42-204ENST00000451154 KRTAP4-5Q9BYR2 181 aa18.82■□□□□ 0.6
USP42-204ENST00000451154 PYYP10082 97 aa18.81■□□□□ 0.6
USP42-204ENST00000451154 HIST1H1EP10412 219 aaKnown RBP18.81■□□□□ 0.6
USP42-204ENST00000451154 ESRGQ1W209 222 aa18.81■□□□□ 0.6
USP42-204ENST00000451154 MRPL53Q96EL3 112 aaKnown RBP18.81■□□□□ 0.6
USP42-204ENST00000451154 ZNF503Q96F45 646 aa18.81■□□□□ 0.6
USP42-204ENST00000451154 TMPRSS5Q9H3S3 457 aa18.81■□□□□ 0.6
USP42-204ENST00000451154 GPN1Q9HCN4 374 aaPredicted RBP18.81■□□□□ 0.6
USP42-204ENST00000451154 TMEM14CQ9P0S9 112 aa18.81■□□□□ 0.6
USP42-204ENST00000451154 TIMM9Q9Y5J7 89 aa18.81■□□□□ 0.6
USP42-204ENST00000451154 FAM240BA0A1B0GVZ2 78 aa18.8■□□□□ 0.6
USP42-204ENST00000451154 SLC25A5P05141 298 aaKnown RBP18.8■□□□□ 0.6
USP42-204ENST00000451154 DAZ2Q13117 558 aaKnown RBP18.8■□□□□ 0.6
USP42-204ENST00000451154 ATP6V1FQ16864 119 aa18.8■□□□□ 0.6
USP42-204ENST00000451154 GCSAMLQ5JQS6 135 aa18.8■□□□□ 0.6
USP42-204ENST00000451154 BLNKQ8WV28 456 aa18.8■□□□□ 0.6
USP42-204ENST00000451154 AGPAT4-IT1Q9H0P7 198 aa18.8■□□□□ 0.6
USP42-204ENST00000451154 GSN-AS1Q9NRJ2 163 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms