RNA–Protein interactions for RNA: ENST00000449684.6

LIMS1-210, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-210ENST00000449684 TMEM256Q8N2U0 113 aa11.09□□□□□ -0.63
LIMS1-210ENST00000449684 NPCDR1Q9BY65 106 aa11.09□□□□□ -0.63
LIMS1-210ENST00000449684 KCNIP2Q9NS61 270 aa11.09□□□□□ -0.63
LIMS1-210ENST00000449684 TIMM9Q9Y5J7 89 aa11.09□□□□□ -0.63
LIMS1-210ENST00000449684 PPP1R1CQ8WVI7 109 aa11.08□□□□□ -0.64
LIMS1-210ENST00000449684 PLA2G2EQ9NZK7 142 aa11.08□□□□□ -0.64
LIMS1-210ENST00000449684 C17orf112F2Z3M2 114 aa11.07□□□□□ -0.64
LIMS1-210ENST00000449684 H0YIZ8 118 aa11.07□□□□□ -0.64
LIMS1-210ENST00000449684 H2BFSP57053 126 aa11.07□□□□□ -0.64
LIMS1-210ENST00000449684 SAT2Q96F10 170 aaPredicted RBP11.07□□□□□ -0.64
LIMS1-210ENST00000449684 LYRM9A8MSI8 78 aa11.06□□□□□ -0.64
LIMS1-210ENST00000449684 PRAC2D3DTV9 90 aa11.06□□□□□ -0.64
LIMS1-210ENST00000449684 PRM2P04554 102 aa11.06□□□□□ -0.64
LIMS1-210ENST00000449684 P0DMU3 169 aa11.06□□□□□ -0.64
LIMS1-210ENST00000449684 FAM231AP0DMU4 169 aa11.06□□□□□ -0.64
LIMS1-210ENST00000449684 FAM231CP0DMU5 169 aa11.06□□□□□ -0.64
LIMS1-210ENST00000449684 HIST1H1EP10412 219 aaKnown RBP11.06□□□□□ -0.64
LIMS1-210ENST00000449684 TAS2R60P59551 318 aa11.06□□□□□ -0.64
LIMS1-210ENST00000449684 OXA1LQ15070 435 aa11.06□□□□□ -0.64
LIMS1-210ENST00000449684 BLNKQ8WV28 456 aa11.06□□□□□ -0.64
LIMS1-210ENST00000449684 FAM210BQ96KR6 192 aa11.06□□□□□ -0.64
LIMS1-210ENST00000449684 AAMDCQ9H7C9 122 aa11.06□□□□□ -0.64
LIMS1-210ENST00000449684 ZNF586Q9NXT0 402 aa11.06□□□□□ -0.64
LIMS1-210ENST00000449684 TMEM14CQ9P0S9 112 aa11.06□□□□□ -0.64
LIMS1-210ENST00000449684 TRBV19A0A075B6N1 114 aa11.05□□□□□ -0.64
LIMS1-210ENST00000449684 ZNF253O75346 499 aa11.05□□□□□ -0.64
LIMS1-210ENST00000449684 MPC2O95563 127 aa11.05□□□□□ -0.64
LIMS1-210ENST00000449684 IFNA5P01569 189 aa11.05□□□□□ -0.64
LIMS1-210ENST00000449684 DEFB130BP0DP73 79 aa11.05□□□□□ -0.64
LIMS1-210ENST00000449684 DEFB130AP0DP74 79 aa11.05□□□□□ -0.64
LIMS1-210ENST00000449684 PYYP10082 97 aa11.05□□□□□ -0.64
LIMS1-210ENST00000449684 KMT2AQ03164 3969 aa11.05□□□□□ -0.64
LIMS1-210ENST00000449684 GCSAMLQ5JQS6 135 aa11.05□□□□□ -0.64
LIMS1-210ENST00000449684 CCDC28AQ8IWP9 274 aa11.05□□□□□ -0.64
LIMS1-210ENST00000449684 SCGB1C1Q8TD33 95 aa11.05□□□□□ -0.64
LIMS1-210ENST00000449684 ATP5SQ99766 215 aa11.05□□□□□ -0.64
LIMS1-210ENST00000449684 WDR61Q9GZS3 305 aaKnown RBP11.05□□□□□ -0.64
LIMS1-210ENST00000449684 PRELID1Q9Y255 219 aa11.05□□□□□ -0.64
LIMS1-210ENST00000449684 H7BYZ3 331 aa11.04□□□□□ -0.64
LIMS1-210ENST00000449684 J3KRW8 73 aa11.04□□□□□ -0.64
LIMS1-210ENST00000449684 AZU1P20160 251 aa11.04□□□□□ -0.64
LIMS1-210ENST00000449684 RPL12P30050 165 aaKnown RBP11.04□□□□□ -0.64
LIMS1-210ENST00000449684 LEPP41159 167 aa11.04□□□□□ -0.64
LIMS1-210ENST00000449684 PDE6HQ13956 83 aa11.04□□□□□ -0.64
LIMS1-210ENST00000449684 UBE2DNLQ8IWF7 75 aa11.04□□□□□ -0.64
LIMS1-210ENST00000449684 C16orf74Q96GX8 76 aa11.04□□□□□ -0.64
LIMS1-210ENST00000449684 C20orf144Q9BQM9 153 aa11.04□□□□□ -0.64
LIMS1-210ENST00000449684 MIR17HGQ75NE6 70 aa11.03□□□□□ -0.64
LIMS1-210ENST00000449684 MRPL53Q96EL3 112 aaKnown RBP11.03□□□□□ -0.64
LIMS1-210ENST00000449684 MRPL32Q9BYC8 188 aaKnown RBP11.03□□□□□ -0.64
LIMS1-210ENST00000449684 PARD6GQ9BYG4 376 aaPredicted RBP11.03□□□□□ -0.64
LIMS1-210ENST00000449684 SMIM3Q9BZL3 60 aa11.03□□□□□ -0.64
LIMS1-210ENST00000449684 OR51M1Q9H341 326 aa11.03□□□□□ -0.64
LIMS1-210ENST00000449684 HSPB11Q9Y547 144 aa11.03□□□□□ -0.64
LIMS1-210ENST00000449684 TIMM8BQ9Y5J9 83 aaPredicted RBP11.03□□□□□ -0.64
LIMS1-210ENST00000449684 ZNF493Q6ZR52 646 aa11.02□□□□□ -0.65
LIMS1-210ENST00000449684 POM121L12Q8N7R1 296 aa11.02□□□□□ -0.65
LIMS1-210ENST00000449684 PAXXQ9BUH6 204 aa11.02□□□□□ -0.65
LIMS1-210ENST00000449684 SLC25A2Q9BXI2 301 aa11.02□□□□□ -0.65
LIMS1-210ENST00000449684 BIRC6Q9NR09 4857 aa11.01□□□□□ -0.65
LIMS1-210ENST00000449684 NPIPB6E9PJ23 425 aa11.01□□□□□ -0.65
LIMS1-210ENST00000449684 M0R3E3 92 aa11.01□□□□□ -0.65
LIMS1-210ENST00000449684 OR7C2O60412 319 aa11.01□□□□□ -0.65
LIMS1-210ENST00000449684 NBEAP1P0C6P0 100 aa11.01□□□□□ -0.65
LIMS1-210ENST00000449684 CT45A10P0DMU9 189 aa11.01□□□□□ -0.65
LIMS1-210ENST00000449684 ICAM4Q14773 271 aa11.01□□□□□ -0.65
LIMS1-210ENST00000449684 FCN2Q15485 313 aa11.01□□□□□ -0.65
LIMS1-210ENST00000449684 FFAR4Q5NUL3 377 aa11.01□□□□□ -0.65
LIMS1-210ENST00000449684 GFI1BQ5VTD9 330 aa11.01□□□□□ -0.65
LIMS1-210ENST00000449684 EXOC3-AS1Q8N2X6 119 aa11.01□□□□□ -0.65
LIMS1-210ENST00000449684 TMEM263Q8WUH6 116 aaKnown RBP11.01□□□□□ -0.65
LIMS1-210ENST00000449684 LINC00477Q96M19 166 aa11.01□□□□□ -0.65
LIMS1-210ENST00000449684 ODF3Q96PU9 254 aa11.01□□□□□ -0.65
LIMS1-210ENST00000449684 MBD2Q9UBB5 411 aa11.01□□□□□ -0.65
LIMS1-210ENST00000449684 FUT9Q9Y231 359 aa11.01□□□□□ -0.65
LIMS1-210ENST00000449684 VPS13DQ5THJ4 4388 aa11□□□□□ -0.65
LIMS1-210ENST00000449684 TRAV12-3A0A0B4J271 114 aa11□□□□□ -0.65
LIMS1-210ENST00000449684 F5H768 121 aa11□□□□□ -0.65
LIMS1-210ENST00000449684 NDUFB4O95168 129 aa11□□□□□ -0.65
LIMS1-210ENST00000449684 OR10J4P0C629 311 aa11□□□□□ -0.65
LIMS1-210ENST00000449684 ERCC8Q13216 396 aa11□□□□□ -0.65
LIMS1-210ENST00000449684 KIR3DS1Q14943 382 aa11□□□□□ -0.65
LIMS1-210ENST00000449684 FAM122CQ6P4D5 195 aa11□□□□□ -0.65
LIMS1-210ENST00000449684 TMEM88Q6PEY1 159 aa11□□□□□ -0.65
LIMS1-210ENST00000449684 RNF141Q8WVD5 230 aa11□□□□□ -0.65
LIMS1-210ENST00000449684 NOP10Q9NPE3 64 aaKnown RBP11□□□□□ -0.65
LIMS1-210ENST00000449684 ALG5Q9Y673 324 aa11□□□□□ -0.65
LIMS1-210ENST00000449684 SNURFLB1AK76 121 aa10.99□□□□□ -0.65
LIMS1-210ENST00000449684 PTTG1O95997 202 aa10.99□□□□□ -0.65
LIMS1-210ENST00000449684 ATP5G1P05496 136 aa10.99□□□□□ -0.65
LIMS1-210ENST00000449684 CSN1S1P47710 185 aa10.99□□□□□ -0.65
LIMS1-210ENST00000449684 ATP5G3P48201 142 aa10.99□□□□□ -0.65
LIMS1-210ENST00000449684 TAS2R45P59539 299 aa10.99□□□□□ -0.65
LIMS1-210ENST00000449684 TMEM78Q5T7P6 136 aa10.99□□□□□ -0.65
LIMS1-210ENST00000449684 FAM167A-AS1Q96KT0 104 aa10.99□□□□□ -0.65
LIMS1-210ENST00000449684 MED28Q9H204 178 aa10.99□□□□□ -0.65
LIMS1-210ENST00000449684 CBY3A6NI87 242 aa10.98□□□□□ -0.65
LIMS1-210ENST00000449684 SLC25A5P05141 298 aaKnown RBP10.98□□□□□ -0.65
LIMS1-210ENST00000449684 C15orf53Q8NAA6 179 aa10.98□□□□□ -0.65
LIMS1-210ENST00000449684 PYGO2Q9BRQ0 406 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms