RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 IGF2BP2-AS1Q96M15 143 aa9.93□□□□□ -0.82
UBE3B-204ENST00000449510 TRAV26-2A0A0B4J265 109 aa9.93□□□□□ -0.82
UBE3B-204ENST00000449510 TIMM23O14925 209 aa9.93□□□□□ -0.82
UBE3B-204ENST00000449510 SH2D1AO60880 128 aa9.93□□□□□ -0.82
UBE3B-204ENST00000449510 ERCC8Q13216 396 aa9.93□□□□□ -0.82
UBE3B-204ENST00000449510 MSMPQ1L6U9 139 aa9.93□□□□□ -0.82
UBE3B-204ENST00000449510 C1orf122Q6ZSJ8 110 aa9.93□□□□□ -0.82
UBE3B-204ENST00000449510 Q8N976 141 aa9.93□□□□□ -0.82
UBE3B-204ENST00000449510 LINC01560Q8TB33 94 aa9.93□□□□□ -0.82
UBE3B-204ENST00000449510 SCGB3A1Q96QR1 104 aa9.93□□□□□ -0.82
UBE3B-204ENST00000449510 CHAC1Q9BUX1 264 aa9.93□□□□□ -0.82
UBE3B-204ENST00000449510 UBTD1Q9HAC8 227 aa9.93□□□□□ -0.82
UBE3B-204ENST00000449510 MSRB1Q9NZV6 116 aa9.93□□□□□ -0.82
UBE3B-204ENST00000449510 CUL9Q8IWT3 2517 aa9.93□□□□□ -0.82
UBE3B-204ENST00000449510 NPYP01303 97 aa9.93□□□□□ -0.82
UBE3B-204ENST00000449510 CKS1BP61024 79 aa9.93□□□□□ -0.82
UBE3B-204ENST00000449510 TMEM249Q2WGJ8 235 aa9.93□□□□□ -0.82
UBE3B-204ENST00000449510 ZNF474Q6S9Z5 364 aaPredicted RBP9.93□□□□□ -0.82
UBE3B-204ENST00000449510 OR5A1Q8NGJ0 315 aa9.93□□□□□ -0.82
UBE3B-204ENST00000449510 SLC25A15Q9Y619 301 aa9.93□□□□□ -0.82
UBE3B-204ENST00000449510 NCOR2Q9Y618 2525 aa9.93□□□□□ -0.82
UBE3B-204ENST00000449510 TM4SF5O14894 197 aa9.92□□□□□ -0.82
UBE3B-204ENST00000449510 PAX1P15863 534 aa9.92□□□□□ -0.82
UBE3B-204ENST00000449510 HLA-DMBP28068 263 aa9.92□□□□□ -0.82
UBE3B-204ENST00000449510 MDS2Q8NDY4 140 aa9.92□□□□□ -0.82
UBE3B-204ENST00000449510 TMEM167AQ8TBQ9 72 aa9.92□□□□□ -0.82
UBE3B-204ENST00000449510 C16orf92Q96LL3 132 aa9.92□□□□□ -0.82
UBE3B-204ENST00000449510 NOTCH2Q04721 2471 aa9.92□□□□□ -0.82
UBE3B-204ENST00000449510 DPM2O94777 84 aa9.92□□□□□ -0.82
UBE3B-204ENST00000449510 ANXA2RQ3ZCQ2 193 aa9.92□□□□□ -0.82
UBE3B-204ENST00000449510 PHLDA3Q9Y5J5 127 aa9.92□□□□□ -0.82
UBE3B-204ENST00000449510 FAM231DQ6ZW35 169 aa9.92□□□□□ -0.82
UBE3B-204ENST00000449510 RAXQ9Y2V3 346 aa9.92□□□□□ -0.82
UBE3B-204ENST00000449510 MYO18BQ8IUG5 2567 aa9.91□□□□□ -0.82
UBE3B-204ENST00000449510 TMEM8BA6NDV4 472 aa9.91□□□□□ -0.82
UBE3B-204ENST00000449510 WFDC2Q14508 124 aa9.91□□□□□ -0.82
UBE3B-204ENST00000449510 SP5Q6BEB4 398 aaPredicted RBP9.91□□□□□ -0.82
UBE3B-204ENST00000449510 OR9G4Q8NGQ1 327 aa9.91□□□□□ -0.82
UBE3B-204ENST00000449510 C21orf62Q9NYP8 219 aa9.91□□□□□ -0.82
UBE3B-204ENST00000449510 MAP1AP78559 2803 aaPredicted RBP9.91□□□□□ -0.82
UBE3B-204ENST00000449510 SPTBN5Q9NRC6 3674 aaKnown RBP9.91□□□□□ -0.82
UBE3B-204ENST00000449510 VWC2LB2RUY7 222 aa9.91□□□□□ -0.82
UBE3B-204ENST00000449510 C22orf46C9J442 243 aa9.91□□□□□ -0.82
UBE3B-204ENST00000449510 CD3EP07766 207 aa9.91□□□□□ -0.82
UBE3B-204ENST00000449510 NEU4Q8WWR8 484 aaPredicted RBP9.91□□□□□ -0.82
UBE3B-204ENST00000449510 A0A1W2PPM0 123 aa9.91□□□□□ -0.82
UBE3B-204ENST00000449510 H3BRM9 83 aa9.91□□□□□ -0.82
UBE3B-204ENST00000449510 IGLC1P0CG04 106 aa9.91□□□□□ -0.82
UBE3B-204ENST00000449510 DLX6P56179 175 aa9.91□□□□□ -0.82
UBE3B-204ENST00000449510 MRPL51Q4U2R6 128 aaKnown RBP9.91□□□□□ -0.82
UBE3B-204ENST00000449510 K7EP34 96 aa9.9□□□□□ -0.82
UBE3B-204ENST00000449510 CEACAM3P40198 252 aa9.9□□□□□ -0.82
UBE3B-204ENST00000449510 SCRT2Q9NQ03 307 aa9.9□□□□□ -0.82
UBE3B-204ENST00000449510 LTAP01374 205 aa9.9□□□□□ -0.82
UBE3B-204ENST00000449510 PRTN3P24158 256 aa9.9□□□□□ -0.82
UBE3B-204ENST00000449510 EFNA4P52798 201 aa9.9□□□□□ -0.82
UBE3B-204ENST00000449510 KLRD1Q13241 179 aa9.9□□□□□ -0.82
UBE3B-204ENST00000449510 RNF182Q8N6D2 247 aa9.9□□□□□ -0.82
UBE3B-204ENST00000449510 FABP5P3A8MUU1 101 aa9.9□□□□□ -0.83
UBE3B-204ENST00000449510 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.9□□□□□ -0.83
UBE3B-204ENST00000449510 FXYD2P54710 66 aa9.9□□□□□ -0.83
UBE3B-204ENST00000449510 C1orf159Q96HA4 380 aa9.9□□□□□ -0.83
UBE3B-204ENST00000449510 SIGLEC9Q9Y336 463 aa9.9□□□□□ -0.83
UBE3B-204ENST00000449510 NDPQ00604 133 aa9.89□□□□□ -0.83
UBE3B-204ENST00000449510 CLEC19AQ6UXS0 136 aa9.89□□□□□ -0.83
UBE3B-204ENST00000449510 USP9YO00507 2555 aaPredicted RBP9.89□□□□□ -0.83
UBE3B-204ENST00000449510 SRD5A1P18405 259 aa9.89□□□□□ -0.83
UBE3B-204ENST00000449510 C1orf162Q8NEQ5 155 aaPredicted RBP9.89□□□□□ -0.83
UBE3B-204ENST00000449510 TRGV9Q99603 122 aa9.89□□□□□ -0.83
UBE3B-204ENST00000449510 PGPEP1Q9NXJ5 209 aa9.89□□□□□ -0.83
UBE3B-204ENST00000449510 ZNF815PA8K554 130 aa9.88□□□□□ -0.83
UBE3B-204ENST00000449510 KLF5Q13887 457 aaPredicted RBP9.88□□□□□ -0.83
UBE3B-204ENST00000449510 FAM104BQ5XKR9 115 aa9.88□□□□□ -0.83
UBE3B-204ENST00000449510 Q71RC1 249 aaPredicted RBP9.88□□□□□ -0.83
UBE3B-204ENST00000449510 PLSCR4Q9NRQ2 329 aa9.88□□□□□ -0.83
UBE3B-204ENST00000449510 WDFY3Q8IZQ1 3526 aa9.88□□□□□ -0.83
UBE3B-204ENST00000449510 IGHV1-8P0DP01 117 aa9.88□□□□□ -0.83
UBE3B-204ENST00000449510 ATP5G2Q06055 141 aa9.88□□□□□ -0.83
UBE3B-204ENST00000449510 DDB2Q92466 427 aa9.88□□□□□ -0.83
UBE3B-204ENST00000449510 ATG2AQ2TAZ0 1938 aa9.88□□□□□ -0.83
UBE3B-204ENST00000449510 PRSS46E5RG02 174 aa9.88□□□□□ -0.83
UBE3B-204ENST00000449510 NDUFS7O75251 213 aa9.88□□□□□ -0.83
UBE3B-204ENST00000449510 SP9P0CG40 484 aa9.88□□□□□ -0.83
UBE3B-204ENST00000449510 RBPJQ06330 500 aa9.88□□□□□ -0.83
UBE3B-204ENST00000449510 MRPL35Q9NZE8 188 aaKnown RBP9.88□□□□□ -0.83
UBE3B-204ENST00000449510 ZNF256Q9Y2P7 627 aaPredicted RBP9.88□□□□□ -0.83
UBE3B-204ENST00000449510 REV3LO60673 3130 aa9.87□□□□□ -0.83
UBE3B-204ENST00000449510 GAGE12HA6NDE8 117 aa9.87□□□□□ -0.83
UBE3B-204ENST00000449510 HOXA3O43365 443 aaPredicted RBP9.87□□□□□ -0.83
UBE3B-204ENST00000449510 FTH1P19P0C7X4 201 aa9.87□□□□□ -0.83
UBE3B-204ENST00000449510 ASCL5Q7RTU5 278 aa9.87□□□□□ -0.83
UBE3B-204ENST00000449510 COLQQ9Y215 455 aaPredicted RBP9.87□□□□□ -0.83
UBE3B-204ENST00000449510 MBD6Q96DN6 1003 aa9.87□□□□□ -0.83
UBE3B-204ENST00000449510 TRAV8-2A0A0B4J237 113 aa9.87□□□□□ -0.83
UBE3B-204ENST00000449510 IGHV1-3A0A0C4DH29 117 aa9.87□□□□□ -0.83
UBE3B-204ENST00000449510 NPIPB6E9PJ23 425 aa9.87□□□□□ -0.83
UBE3B-204ENST00000449510 NDUFS8O00217 210 aa9.87□□□□□ -0.83
UBE3B-204ENST00000449510 ATP5LO75964 103 aa9.87□□□□□ -0.83
UBE3B-204ENST00000449510 TNFRSF6BO95407 300 aa9.87□□□□□ -0.83
UBE3B-204ENST00000449510 Q6AWC8 147 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms