RNA–Protein interactions for RNA: ENST00000449395.5

PRDM15-208, Transcript of PR/SET domain 15, humanhuman

TSL 1 (best)

Gene PRDM15, Length 6,662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-208ENST00000449395 DKK4Q9UBT3 224 aa8.49□□□□□ -1.05
PRDM15-208ENST00000449395 C14orf178Q8N769 122 aaPredicted RBP8.49□□□□□ -1.05
PRDM15-208ENST00000449395 KIAA2026Q5HYC2 2103 aa8.49□□□□□ -1.05
PRDM15-208ENST00000449395 LY6G6EA0A0G2JKS1 128 aa8.49□□□□□ -1.05
PRDM15-208ENST00000449395 U3KQA8 63 aa8.49□□□□□ -1.05
PRDM15-208ENST00000449395 PLXNA3P51805 1871 aa8.49□□□□□ -1.05
PRDM15-208ENST00000449395 TECTAO75443 2155 aa8.49□□□□□ -1.05
PRDM15-208ENST00000449395 C1orf194Q5T5A4 169 aa8.48□□□□□ -1.05
PRDM15-208ENST00000449395 BCL6BQ8N143 479 aaPredicted RBP8.48□□□□□ -1.05
PRDM15-208ENST00000449395 SLX1AQ9BQ83 275 aa8.48□□□□□ -1.05
PRDM15-208ENST00000449395 SRSF8Q9BRL6 282 aaKnown RBP8.48□□□□□ -1.05
PRDM15-208ENST00000449395 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.48□□□□□ -1.05
PRDM15-208ENST00000449395 FHL1Q13642 323 aa8.48□□□□□ -1.05
PRDM15-208ENST00000449395 RHPN1-AS1Q9BWJ2 59 aa8.48□□□□□ -1.05
PRDM15-208ENST00000449395 SMAD5-AS1Q9Y6J3 95 aa8.48□□□□□ -1.05
PRDM15-208ENST00000449395 HOXD3P31249 432 aaPredicted RBP8.48□□□□□ -1.05
PRDM15-208ENST00000449395 TMEM155Q4W5P6 130 aa8.48□□□□□ -1.05
PRDM15-208ENST00000449395 CST9LQ9H4G1 147 aa8.48□□□□□ -1.05
PRDM15-208ENST00000449395 PTPRDP23468 1912 aa8.48□□□□□ -1.05
PRDM15-208ENST00000449395 PRB2P02812 416 aaPredicted RBP8.48□□□□□ -1.05
PRDM15-208ENST00000449395 HS3ST6Q96QI5 342 aa8.48□□□□□ -1.05
PRDM15-208ENST00000449395 ERCC8Q13216 396 aa8.48□□□□□ -1.05
PRDM15-208ENST00000449395 GATD1Q8NB37 220 aa8.48□□□□□ -1.05
PRDM15-208ENST00000449395 JPT2Q9H910 190 aa8.48□□□□□ -1.05
PRDM15-208ENST00000449395 DOCK9Q9BZ29 2069 aa8.47□□□□□ -1.05
PRDM15-208ENST00000449395 SMKR1H3BMG3 65 aa8.47□□□□□ -1.05
PRDM15-208ENST00000449395 C3orf79P0CE67 100 aa8.47□□□□□ -1.05
PRDM15-208ENST00000449395 PAX4O43316 350 aa8.47□□□□□ -1.05
PRDM15-208ENST00000449395 PRTN3P24158 256 aa8.47□□□□□ -1.05
PRDM15-208ENST00000449395 RASL10AQ92737 203 aa8.47□□□□□ -1.05
PRDM15-208ENST00000449395 SIGMAR1Q99720 223 aa8.47□□□□□ -1.05
PRDM15-208ENST00000449395 MRPL27Q9P0M9 148 aaKnown RBP8.47□□□□□ -1.05
PRDM15-208ENST00000449395 ZNRD1Q9P1U0 126 aa8.47□□□□□ -1.05
PRDM15-208ENST00000449395 FAM90A2PQ658T7 463 aa8.47□□□□□ -1.05
PRDM15-208ENST00000449395 AMN1Q8IY45 258 aa8.47□□□□□ -1.05
PRDM15-208ENST00000449395 SYS1-DBNDD2H3BUS1 97 aa8.47□□□□□ -1.05
PRDM15-208ENST00000449395 INSP01308 110 aa8.47□□□□□ -1.05
PRDM15-208ENST00000449395 NAA38Q9BRA0 125 aaKnown RBP8.47□□□□□ -1.05
PRDM15-208ENST00000449395 SHANK2-AS3Q9BTD1 123 aa8.47□□□□□ -1.05
PRDM15-208ENST00000449395 IGHV4-61A0A0C4DH41 118 aa8.47□□□□□ -1.05
PRDM15-208ENST00000449395 A0A1W2PPI3 338 aa8.47□□□□□ -1.05
PRDM15-208ENST00000449395 IGHV4-59P01825 116 aa8.47□□□□□ -1.05
PRDM15-208ENST00000449395 Q86TA4 180 aa8.47□□□□□ -1.05
PRDM15-208ENST00000449395 YLPM1P49750 1951 aaKnown RBP8.46□□□□□ -1.05
PRDM15-208ENST00000449395 A0A087X0K7 114 aa8.46□□□□□ -1.05
PRDM15-208ENST00000449395 ITGB1BP1O14713 200 aa8.46□□□□□ -1.05
PRDM15-208ENST00000449395 FAM208BQ5VWN6 2430 aa8.46□□□□□ -1.05
PRDM15-208ENST00000449395 LINC00479Q96M42 142 aa8.46□□□□□ -1.05
PRDM15-208ENST00000449395 NBASA2RRP1 2371 aa8.46□□□□□ -1.06
PRDM15-208ENST00000449395 ADAMTS9Q9P2N4 1935 aa8.46□□□□□ -1.06
PRDM15-208ENST00000449395 A0A087WWL8 130 aa8.46□□□□□ -1.06
PRDM15-208ENST00000449395 DAZ1Q9NQZ3 744 aaKnown RBP8.46□□□□□ -1.06
PRDM15-208ENST00000449395 IGKV1-6A0A0C4DH72 117 aa8.46□□□□□ -1.06
PRDM15-208ENST00000449395 C19orf84I3L1E1 186 aa8.45□□□□□ -1.06
PRDM15-208ENST00000449395 IGLV2-23P01705 113 aa8.45□□□□□ -1.06
PRDM15-208ENST00000449395 ANAPC13Q9BS18 74 aa8.45□□□□□ -1.06
PRDM15-208ENST00000449395 C1orf159Q96HA4 380 aa8.45□□□□□ -1.06
PRDM15-208ENST00000449395 C1QTNF4Q9BXJ3 329 aa8.45□□□□□ -1.06
PRDM15-208ENST00000449395 PCNX1Q96RV3 2341 aa8.45□□□□□ -1.06
PRDM15-208ENST00000449395 IGLL5B9A064 214 aa8.45□□□□□ -1.06
PRDM15-208ENST00000449395 OVOL3O00110 214 aa8.45□□□□□ -1.06
PRDM15-208ENST00000449395 PDE6HQ13956 83 aa8.45□□□□□ -1.06
PRDM15-208ENST00000449395 DLX4Q92988 240 aaPredicted RBP8.45□□□□□ -1.06
PRDM15-208ENST00000449395 FANCMQ8IYD8 2048 aa8.45□□□□□ -1.06
PRDM15-208ENST00000449395 GFRA4Q9GZZ7 299 aa8.45□□□□□ -1.06
PRDM15-208ENST00000449395 ZGRF1Q86YA3 2104 aa8.45□□□□□ -1.06
PRDM15-208ENST00000449395 IGHV2-70DA0A0C4DH43 119 aa8.44□□□□□ -1.06
PRDM15-208ENST00000449395 CCL24O00175 119 aa8.44□□□□□ -1.06
PRDM15-208ENST00000449395 CD5LO43866 347 aa8.44□□□□□ -1.06
PRDM15-208ENST00000449395 CFPP27918 469 aa8.44□□□□□ -1.06
PRDM15-208ENST00000449395 ZNF562Q6V9R5 426 aa8.44□□□□□ -1.06
PRDM15-208ENST00000449395 CFHR3Q02985 330 aa8.44□□□□□ -1.06
PRDM15-208ENST00000449395 SPAG8Q99932 426 aaPredicted RBP8.44□□□□□ -1.06
PRDM15-208ENST00000449395 TMEM14BQ9NUH8 114 aa8.44□□□□□ -1.06
PRDM15-208ENST00000449395 DOPEY2Q9Y3R5 2298 aa8.44□□□□□ -1.06
PRDM15-208ENST00000449395 ADCYAP1P18509 176 aa8.44□□□□□ -1.06
PRDM15-208ENST00000449395 C6orf226Q5I0X4 101 aa8.44□□□□□ -1.06
PRDM15-208ENST00000449395 CLPSL1A2RUU4 121 aa8.44□□□□□ -1.06
PRDM15-208ENST00000449395 ARMS2P0C7Q2 107 aa8.44□□□□□ -1.06
PRDM15-208ENST00000449395 PYY3Q5JQD4 70 aa8.44□□□□□ -1.06
PRDM15-208ENST00000449395 IGF2-ASQ6U949 168 aa8.44□□□□□ -1.06
PRDM15-208ENST00000449395 TMEM75Q8N9X5 138 aa8.43□□□□□ -1.06
PRDM15-208ENST00000449395 TRAV13-1A0A0B4J241 112 aa8.43□□□□□ -1.06
PRDM15-208ENST00000449395 ATP6V0E1O15342 81 aa8.43□□□□□ -1.06
PRDM15-208ENST00000449395 GP9P14770 177 aa8.43□□□□□ -1.06
PRDM15-208ENST00000449395 UBE2E1P51965 193 aa8.43□□□□□ -1.06
PRDM15-208ENST00000449395 ZC2HC1BQ5TFG8 222 aa8.43□□□□□ -1.06
PRDM15-208ENST00000449395 NLRC5Q86WI3 1866 aa8.43□□□□□ -1.06
PRDM15-208ENST00000449395 MPV17L2Q567V2 206 aa8.43□□□□□ -1.06
PRDM15-208ENST00000449395 PLXNA4Q9HCM2 1894 aa8.43□□□□□ -1.06
PRDM15-208ENST00000449395 DEFB131AP59861 70 aa8.43□□□□□ -1.06
PRDM15-208ENST00000449395 NDUFA4L2Q9NRX3 87 aa8.43□□□□□ -1.06
PRDM15-208ENST00000449395 TNFRSF6BO95407 300 aa8.42□□□□□ -1.06
PRDM15-208ENST00000449395 SPXQ9BT56 116 aa8.42□□□□□ -1.06
PRDM15-208ENST00000449395 TIMM21Q9BVV7 248 aa8.42□□□□□ -1.06
PRDM15-208ENST00000449395 VPREB3Q9UKI3 123 aa8.42□□□□□ -1.06
PRDM15-208ENST00000449395 SPTAN1Q13813 2472 aaKnown RBP8.42□□□□□ -1.06
PRDM15-208ENST00000449395 USF3Q68DE3 2245 aa8.42□□□□□ -1.06
PRDM15-208ENST00000449395 MYMXA0A1B0GTQ4 84 aa8.42□□□□□ -1.06
PRDM15-208ENST00000449395 LEPROTO15243 131 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms