RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, human

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-208	ENST00000448611	TMEM89	A2RUT3	159 aa		13.58	□□□□□ -0.24
LMNA-208	ENST00000448611	IGFL4	Q6B9Z1	124 aa		13.58	□□□□□ -0.24
LMNA-208	ENST00000448611	IZUMO1R	A6ND01	250 aa		13.57	□□□□□ -0.24
LMNA-208	ENST00000448611	CHEK1	O14757	476 aa		13.57	□□□□□ -0.24
LMNA-208	ENST00000448611	CBLN1	P23435	193 aa		13.57	□□□□□ -0.24
LMNA-208	ENST00000448611	HLA-DMB	P28068	263 aa		13.57	□□□□□ -0.24
LMNA-208	ENST00000448611	CDX1	P47902	265 aa	Predicted RBP	13.57	□□□□□ -0.24
LMNA-208	ENST00000448611	FAM209B	Q5JX69	171 aa		13.57	□□□□□ -0.24
LMNA-208	ENST00000448611	C16orf54	Q6UWD8	224 aa		13.57	□□□□□ -0.24
LMNA-208	ENST00000448611	C10orf99	Q6UWK7	81 aa		13.57	□□□□□ -0.24
LMNA-208	ENST00000448611	TSKU	Q8WUA8	353 aa		13.57	□□□□□ -0.24
LMNA-208	ENST00000448611	NPFFR1	Q9GZQ6	430 aa		13.57	□□□□□ -0.24
LMNA-208	ENST00000448611	RPP21	Q9H633	154 aa	Known RBP	13.57	□□□□□ -0.24
LMNA-208	ENST00000448611	TEX15	Q9BXT5	2789 aa		13.57	□□□□□ -0.24
LMNA-208	ENST00000448611	NPIPB6	E9PJ23	425 aa		13.56	□□□□□ -0.24
LMNA-208	ENST00000448611	SLC35B1	P78383	322 aa		13.56	□□□□□ -0.24
LMNA-208	ENST00000448611	ZC2HC1A	Q96GY0	325 aa		13.56	□□□□□ -0.24
LMNA-208	ENST00000448611	SLC50A1	Q9BRV3	221 aa		13.56	□□□□□ -0.24
LMNA-208	ENST00000448611	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	13.56	□□□□□ -0.24
LMNA-208	ENST00000448611	IFITM10	A6NMD0	228 aa		13.56	□□□□□ -0.24
LMNA-208	ENST00000448611	SPINK4	O60575	86 aa		13.56	□□□□□ -0.24
LMNA-208	ENST00000448611	IGKV2D-40	P01614	121 aa	Predicted RBP	13.56	□□□□□ -0.24
LMNA-208	ENST00000448611		P01737	135 aa		13.56	□□□□□ -0.24
LMNA-208	ENST00000448611	CT83	Q5H943	113 aa		13.56	□□□□□ -0.24
LMNA-208	ENST00000448611	GFI1B	Q5VTD9	330 aa		13.56	□□□□□ -0.24
LMNA-208	ENST00000448611	IL17REL	Q6ZVW7	336 aa		13.56	□□□□□ -0.24
LMNA-208	ENST00000448611	SIGLECL1	Q8N7X8	197 aa		13.56	□□□□□ -0.24
LMNA-208	ENST00000448611	GLMP	Q8WWB7	406 aa		13.56	□□□□□ -0.24
LMNA-208	ENST00000448611	ASCL2	Q99929	193 aa		13.56	□□□□□ -0.24
LMNA-208	ENST00000448611	RPL19	P84098	196 aa	Known RBP	13.55	□□□□□ -0.24
LMNA-208	ENST00000448611	GBGT1	Q8N5D6	347 aa		13.55	□□□□□ -0.24
LMNA-208	ENST00000448611	TEX29	Q8N6K0	151 aa		13.55	□□□□□ -0.24
LMNA-208	ENST00000448611	DAZAP1	Q96EP5	407 aa	Known RBP	13.55	□□□□□ -0.24
LMNA-208	ENST00000448611	NEU1	Q99519	415 aa		13.55	□□□□□ -0.24
LMNA-208	ENST00000448611	GNB1L	Q9BYB4	327 aa		13.55	□□□□□ -0.24
LMNA-208	ENST00000448611	PEF1	Q9UBV8	284 aa	Known RBP	13.55	□□□□□ -0.24
LMNA-208	ENST00000448611	NAT8B	Q9UHF3	227 aa		13.55	□□□□□ -0.24
LMNA-208	ENST00000448611	FLNA	P21333	2647 aa	Known RBP	13.55	□□□□□ -0.24
LMNA-208	ENST00000448611	ZNF705F	A8MVS1	300 aa	Predicted RBP	13.54	□□□□□ -0.24
LMNA-208	ENST00000448611	MEOX2	P50222	304 aa		13.54	□□□□□ -0.24
LMNA-208	ENST00000448611	COA6	Q5JTJ3	125 aa	Known RBP	13.54	□□□□□ -0.24
LMNA-208	ENST00000448611	LCN12	Q6JVE5	192 aa		13.54	□□□□□ -0.24
LMNA-208	ENST00000448611	LINC00518	Q8N0U6	118 aa		13.54	□□□□□ -0.24
LMNA-208	ENST00000448611	NUP35	Q8NFH5	326 aa		13.54	□□□□□ -0.24
LMNA-208	ENST00000448611	HIST3H2BB	Q8N257	126 aa		13.54	□□□□□ -0.24
LMNA-208	ENST00000448611	MRPL18	Q9H0U6	180 aa	Known RBP	13.54	□□□□□ -0.24
LMNA-208	ENST00000448611	MXRA5	Q9NR99	2828 aa		13.53	□□□□□ -0.24
LMNA-208	ENST00000448611	TRAV8-2	A0A0B4J237	113 aa		13.53	□□□□□ -0.24
LMNA-208	ENST00000448611	FBLL1	A6NHQ2	334 aa	Known RBP	13.53	□□□□□ -0.24
LMNA-208	ENST00000448611	HIGD1C	A8MV81	97 aa		13.53	□□□□□ -0.24
LMNA-208	ENST00000448611	SNURFL	B1AK76	121 aa		13.53	□□□□□ -0.24
LMNA-208	ENST00000448611	KRTAP1-1	Q07627	177 aa		13.53	□□□□□ -0.24
LMNA-208	ENST00000448611	COX19	Q49B96	90 aa		13.53	□□□□□ -0.24
LMNA-208	ENST00000448611	MRPL54	Q6P161	138 aa	Known RBP	13.53	□□□□□ -0.24
LMNA-208	ENST00000448611	C8orf86	Q6ZUL3	223 aa		13.53	□□□□□ -0.24
LMNA-208	ENST00000448611	C8orf49	Q96NF6	230 aa		13.53	□□□□□ -0.24
LMNA-208	ENST00000448611	XKRY2	A2RUG3	117 aa		13.52	□□□□□ -0.24
LMNA-208	ENST00000448611		A8MWL6	223 aa		13.52	□□□□□ -0.24
LMNA-208	ENST00000448611	S100A8	P05109	93 aa		13.52	□□□□□ -0.24
LMNA-208	ENST00000448611	CRIP1	P50238	77 aa		13.52	□□□□□ -0.24
LMNA-208	ENST00000448611	WDR73	Q6P4I2	378 aa		13.52	□□□□□ -0.24
LMNA-208	ENST00000448611	TMEM136	Q6ZRR5	245 aa		13.52	□□□□□ -0.24
LMNA-208	ENST00000448611	COX8C	Q7Z4L0	72 aa		13.52	□□□□□ -0.24
LMNA-208	ENST00000448611		Q8N2B8	174 aa		13.52	□□□□□ -0.24
LMNA-208	ENST00000448611	RNF182	Q8N6D2	247 aa		13.52	□□□□□ -0.24
LMNA-208	ENST00000448611	OR4B1	Q8NGF8	309 aa		13.52	□□□□□ -0.24
LMNA-208	ENST00000448611	VGLL1	Q99990	258 aa		13.52	□□□□□ -0.24
LMNA-208	ENST00000448611	RPLP1	P05386	114 aa	Known RBP	13.52	□□□□□ -0.25
LMNA-208	ENST00000448611	MYOZ3	Q8TDC0	251 aa		13.52	□□□□□ -0.25
LMNA-208	ENST00000448611	GTSF1	Q8WW33	167 aa		13.52	□□□□□ -0.25
LMNA-208	ENST00000448611	DUX5	Q96PT3	197 aa		13.52	□□□□□ -0.25
LMNA-208	ENST00000448611	GPR61	Q9BZJ8	451 aa		13.52	□□□□□ -0.25
LMNA-208	ENST00000448611	GFRA4	Q9GZZ7	299 aa		13.52	□□□□□ -0.25
LMNA-208	ENST00000448611	PRAC2	D3DTV9	90 aa		13.51	□□□□□ -0.25
LMNA-208	ENST00000448611	MT-ND6	P03923	174 aa		13.51	□□□□□ -0.25
LMNA-208	ENST00000448611	FOXE3	Q13461	319 aa		13.51	□□□□□ -0.25
LMNA-208	ENST00000448611	SAPCD1	Q5SSQ6	148 aa		13.51	□□□□□ -0.25
LMNA-208	ENST00000448611	WIPF2	Q8TF74	440 aa	Predicted RBP	13.51	□□□□□ -0.25
LMNA-208	ENST00000448611	PRR25	Q96S07	402 aa		13.51	□□□□□ -0.25
LMNA-208	ENST00000448611	ELANE	P08246	267 aa		13.51	□□□□□ -0.25
LMNA-208	ENST00000448611	RASL11A	Q6T310	242 aa		13.51	□□□□□ -0.25
LMNA-208	ENST00000448611	TCF24	Q7RTU0	167 aa		13.51	□□□□□ -0.25
LMNA-208	ENST00000448611	TMEM86B	Q8N661	226 aa		13.51	□□□□□ -0.25
LMNA-208	ENST00000448611	MRPL53	Q96EL3	112 aa	Known RBP	13.51	□□□□□ -0.25
LMNA-208	ENST00000448611		A0A1W2PS18	150 aa		13.5	□□□□□ -0.25
LMNA-208	ENST00000448611	RBAKDN	A6NC62	111 aa		13.5	□□□□□ -0.25
LMNA-208	ENST00000448611	FAM231B	A6NCW3	169 aa		13.5	□□□□□ -0.25
LMNA-208	ENST00000448611	PDZD11	Q5EBL8	140 aa		13.5	□□□□□ -0.25
LMNA-208	ENST00000448611	GPHB5	Q86YW7	130 aa		13.5	□□□□□ -0.25
LMNA-208	ENST00000448611	OR2D3	Q8NGH3	330 aa		13.5	□□□□□ -0.25
LMNA-208	ENST00000448611	DAZ1	Q9NQZ3	744 aa	Known RBP	13.5	□□□□□ -0.25
LMNA-208	ENST00000448611	IGHV7-4-1	A0A0J9YVY3	117 aa		13.49	□□□□□ -0.25
LMNA-208	ENST00000448611	CD5L	O43866	347 aa		13.49	□□□□□ -0.25
LMNA-208	ENST00000448611	CT45A10	P0DMU9	189 aa		13.49	□□□□□ -0.25
LMNA-208	ENST00000448611	TM4SF20	Q53R12	229 aa		13.49	□□□□□ -0.25
LMNA-208	ENST00000448611	RNF152	Q8N8N0	203 aa		13.49	□□□□□ -0.25
LMNA-208	ENST00000448611		Q8TAT8	98 aa		13.49	□□□□□ -0.25
LMNA-208	ENST00000448611		K7EMT4	169 aa		13.49	□□□□□ -0.25
LMNA-208	ENST00000448611	HLA-DQA1	P01909	254 aa		13.49	□□□□□ -0.25
LMNA-208	ENST00000448611	ACAN	P16112	2415 aa		13.48	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms