RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 NRN1Q9NPD7 142 aa11.56□□□□□ -0.56
SF1-211ENST00000448404 TIMM8BQ9Y5J9 83 aaPredicted RBP11.56□□□□□ -0.56
SF1-211ENST00000448404 ZNF469Q96JG9 3925 aaPredicted RBP11.55□□□□□ -0.56
SF1-211ENST00000448404 TOMM40O96008 361 aa11.55□□□□□ -0.56
SF1-211ENST00000448404 CTSGP08311 255 aa11.55□□□□□ -0.56
SF1-211ENST00000448404 C15orf32Q32M92 178 aa11.55□□□□□ -0.56
SF1-211ENST00000448404 BPIFA4PQ86YQ2 179 aa11.55□□□□□ -0.56
SF1-211ENST00000448404 TSKUQ8WUA8 353 aa11.55□□□□□ -0.56
SF1-211ENST00000448404 CREBBPQ92793 2442 aa11.55□□□□□ -0.56
SF1-211ENST00000448404 MXRA5Q9NR99 2828 aa11.55□□□□□ -0.56
SF1-211ENST00000448404 CRIP1P50238 77 aa11.55□□□□□ -0.56
SF1-211ENST00000448404 LY6EQ16553 131 aa11.55□□□□□ -0.56
SF1-211ENST00000448404 LCNL1Q6ZST4 164 aa11.55□□□□□ -0.56
SF1-211ENST00000448404 ZNF414Q96IQ9 312 aa11.55□□□□□ -0.56
SF1-211ENST00000448404 RPP21Q9H633 154 aaKnown RBP11.55□□□□□ -0.56
SF1-211ENST00000448404 SONP18583 2426 aaKnown RBP11.54□□□□□ -0.56
SF1-211ENST00000448404 CENPVL3A0A0U1RRI6 287 aa11.54□□□□□ -0.56
SF1-211ENST00000448404 ESDP10768 282 aa11.54□□□□□ -0.56
SF1-211ENST00000448404 MFAP4P55083 255 aa11.54□□□□□ -0.56
SF1-211ENST00000448404 MAPK1IP1LQ8NDC0 245 aa11.54□□□□□ -0.56
SF1-211ENST00000448404 OR4F17Q8NGA8 305 aa11.54□□□□□ -0.56
SF1-211ENST00000448404 C18orf32Q8TCD1 76 aa11.54□□□□□ -0.56
SF1-211ENST00000448404 MRPS12O15235 138 aaKnown RBP11.54□□□□□ -0.56
SF1-211ENST00000448404 CLEC3BP05452 202 aa11.54□□□□□ -0.56
SF1-211ENST00000448404 OR4C5Q8NGB2 326 aa11.54□□□□□ -0.56
SF1-211ENST00000448404 OTORQ9NRC9 128 aa11.54□□□□□ -0.56
SF1-211ENST00000448404 C1RLQ9NZP8 487 aa11.54□□□□□ -0.56
SF1-211ENST00000448404 TRAV40A0A0B4J280 105 aa11.53□□□□□ -0.56
SF1-211ENST00000448404 APOHP02749 345 aaPredicted RBP11.53□□□□□ -0.56
SF1-211ENST00000448404 CLEC19AQ6UXS0 136 aa11.53□□□□□ -0.56
SF1-211ENST00000448404 RNF182Q8N6D2 247 aa11.53□□□□□ -0.56
SF1-211ENST00000448404 ZNF738Q8NE65 137 aa11.53□□□□□ -0.56
SF1-211ENST00000448404 DAZAP1Q96EP5 407 aaKnown RBP11.53□□□□□ -0.56
SF1-211ENST00000448404 COX11Q9Y6N1 276 aa11.53□□□□□ -0.56
SF1-211ENST00000448404 NAV2Q8IVL1 2488 aa11.53□□□□□ -0.56
SF1-211ENST00000448404 C19orf71A6NCJ1 209 aa11.53□□□□□ -0.56
SF1-211ENST00000448404 RHOGP84095 191 aa11.53□□□□□ -0.56
SF1-211ENST00000448404 CCDC144NLQ6NUI1 221 aa11.53□□□□□ -0.56
SF1-211ENST00000448404 RNASEKQ6P5S7 137 aaKnown RBP11.53□□□□□ -0.56
SF1-211ENST00000448404 MCRIP2Q9BUT9 160 aaKnown RBP11.53□□□□□ -0.56
SF1-211ENST00000448404 TRAV9-1A0A075B6T8 112 aa11.52□□□□□ -0.56
SF1-211ENST00000448404 K7EP13 123 aa11.52□□□□□ -0.56
SF1-211ENST00000448404 IGHV4-38-2P0DP08 117 aa11.52□□□□□ -0.56
SF1-211ENST00000448404 FAM231DQ6ZW35 169 aa11.52□□□□□ -0.56
SF1-211ENST00000448404 TMEM75Q8N9X5 138 aa11.52□□□□□ -0.56
SF1-211ENST00000448404 FMC1Q96HJ9 113 aa11.52□□□□□ -0.56
SF1-211ENST00000448404 CCDC168Q8NDH2 2452 aa11.52□□□□□ -0.57
SF1-211ENST00000448404 WI2-2373I1.2A0A1W2PRP0 233 aa11.52□□□□□ -0.57
SF1-211ENST00000448404 HLA-DQA1P01909 254 aa11.52□□□□□ -0.57
SF1-211ENST00000448404 WDR73Q6P4I2 378 aa11.52□□□□□ -0.57
SF1-211ENST00000448404 TTC9CQ8N5M4 171 aa11.52□□□□□ -0.57
SF1-211ENST00000448404 VPS25Q9BRG1 176 aa11.52□□□□□ -0.57
SF1-211ENST00000448404 SMAD5-AS1Q9Y6J3 95 aa11.52□□□□□ -0.57
SF1-211ENST00000448404 CSN3P07498 182 aa11.51□□□□□ -0.57
SF1-211ENST00000448404 FAM106CPP0CH98 169 aa11.51□□□□□ -0.57
SF1-211ENST00000448404 Q0VG73 95 aa11.51□□□□□ -0.57
SF1-211ENST00000448404 PRSS22Q9GZN4 317 aa11.51□□□□□ -0.57
SF1-211ENST00000448404 CLEC5AQ9NY25 188 aa11.51□□□□□ -0.57
SF1-211ENST00000448404 TP73-AS1Q9UF72 201 aa11.51□□□□□ -0.57
SF1-211ENST00000448404 PSG8Q9UQ74 426 aa11.51□□□□□ -0.57
SF1-211ENST00000448404 NPIPB5A8MRT5 1133 aa11.51□□□□□ -0.57
SF1-211ENST00000448404 NPFFO15130 113 aa11.51□□□□□ -0.57
SF1-211ENST00000448404 ARMS2P0C7Q2 107 aa11.51□□□□□ -0.57
SF1-211ENST00000448404 C3orf79P0CE67 100 aa11.51□□□□□ -0.57
SF1-211ENST00000448404 TSPOP30536 169 aa11.51□□□□□ -0.57
SF1-211ENST00000448404 UBE2E1P51965 193 aa11.51□□□□□ -0.57
SF1-211ENST00000448404 Q6ZS46 218 aa11.51□□□□□ -0.57
SF1-211ENST00000448404 NIT1Q86X76 327 aa11.51□□□□□ -0.57
SF1-211ENST00000448404 VGLL1Q99990 258 aa11.51□□□□□ -0.57
SF1-211ENST00000448404 SETD2Q9BYW2 2564 aaPredicted RBP11.51□□□□□ -0.57
SF1-211ENST00000448404 IGHV4-30-2A0A087WSY4 118 aa11.5□□□□□ -0.57
SF1-211ENST00000448404 LINC00173Q6ZV60 143 aa11.5□□□□□ -0.57
SF1-211ENST00000448404 TMEM14CQ9P0S9 112 aa11.5□□□□□ -0.57
SF1-211ENST00000448404 PRAC2D3DTV9 90 aa11.5□□□□□ -0.57
SF1-211ENST00000448404 ERCC8Q13216 396 aa11.5□□□□□ -0.57
SF1-211ENST00000448404 VAMP3Q15836 100 aa11.5□□□□□ -0.57
SF1-211ENST00000448404 URB1-AS1Q96HZ7 61 aa11.5□□□□□ -0.57
SF1-211ENST00000448404 KCNS1Q96KK3 526 aa11.5□□□□□ -0.57
SF1-211ENST00000448404 TEX15Q9BXT5 2789 aa11.5□□□□□ -0.57
SF1-211ENST00000448404 LOC102724200A0A096LPH7 203 aaPredicted RBP11.5□□□□□ -0.57
SF1-211ENST00000448404 MT-ND6P03923 174 aa11.5□□□□□ -0.57
SF1-211ENST00000448404 Q6ZQT7 251 aa11.5□□□□□ -0.57
SF1-211ENST00000448404 MYO9AB2RTY4 2548 aa11.49□□□□□ -0.57
SF1-211ENST00000448404 TRBV9A0A0B4J1U6 114 aa11.49□□□□□ -0.57
SF1-211ENST00000448404 DEFB1P60022 68 aa11.49□□□□□ -0.57
SF1-211ENST00000448404 MINOS1Q5TGZ0 78 aa11.49□□□□□ -0.57
SF1-211ENST00000448404 CCDC140Q96MF4 163 aa11.49□□□□□ -0.57
SF1-211ENST00000448404 MINOS1-NBL1R4GNA1 71 aa11.49□□□□□ -0.57
SF1-211ENST00000448404 SORL1Q92673 2214 aa11.49□□□□□ -0.57
SF1-211ENST00000448404 A0A1B0GXF2 115 aa11.49□□□□□ -0.57
SF1-211ENST00000448404 ZNF324O75467 553 aaPredicted RBP11.49□□□□□ -0.57
SF1-211ENST00000448404 TRBV12-3P01733 135 aa11.49□□□□□ -0.57
SF1-211ENST00000448404 C1orf122Q6ZSJ8 110 aa11.49□□□□□ -0.57
SF1-211ENST00000448404 SPATA12Q7Z6I5 190 aa11.49□□□□□ -0.57
SF1-211ENST00000448404 A1L4Q6 167 aa11.48□□□□□ -0.57
SF1-211ENST00000448404 OVOL3O00110 214 aa11.48□□□□□ -0.57
SF1-211ENST00000448404 IGHG4P01861 327 aa11.48□□□□□ -0.57
SF1-211ENST00000448404 ZNF80P51504 273 aaPredicted RBP11.48□□□□□ -0.57
SF1-211ENST00000448404 EBI3Q14213 229 aa11.48□□□□□ -0.57
SF1-211ENST00000448404 CCL19Q99731 98 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms