RNA–Protein interactions for RNA: ENST00000448340.5

HLCS-205, Transcript of holocarboxylase synthetase, humanhuman

TSL 1 (best)

Gene HLCS, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-205ENST00000448340 RPL35AP18077 110 aaKnown RBP13□□□□□ -0.33
HLCS-205ENST00000448340 APOC4P55056 127 aa13□□□□□ -0.33
HLCS-205ENST00000448340 DEFB1P60022 68 aa13□□□□□ -0.33
HLCS-205ENST00000448340 SSX7Q7RTT5 188 aa13□□□□□ -0.33
HLCS-205ENST00000448340 TRPT1Q86TN4 253 aaKnown RBP13□□□□□ -0.33
HLCS-205ENST00000448340 SBSPONQ8IVN8 264 aa13□□□□□ -0.33
HLCS-205ENST00000448340 KIR2DL5AQ8N109 375 aa13□□□□□ -0.33
HLCS-205ENST00000448340 KIR2DL5BQ8NHK3 375 aa13□□□□□ -0.33
HLCS-205ENST00000448340 AAMDCQ9H7C9 122 aa13□□□□□ -0.33
HLCS-205ENST00000448340 PRELID1Q9Y255 219 aa13□□□□□ -0.33
HLCS-205ENST00000448340 HLA-DRB4X5D2U9 266 aa13□□□□□ -0.33
HLCS-205ENST00000448340 GDF5OSQ5U4N7 250 aa12.99□□□□□ -0.33
HLCS-205ENST00000448340 DPPA3Q6W0C5 159 aa12.99□□□□□ -0.33
HLCS-205ENST00000448340 LYPD1Q8N2G4 141 aa12.99□□□□□ -0.33
HLCS-205ENST00000448340 RPUSD4Q96CM3 377 aaKnown RBP12.99□□□□□ -0.33
HLCS-205ENST00000448340 MRPL53Q96EL3 112 aaKnown RBP12.99□□□□□ -0.33
HLCS-205ENST00000448340 ASCL2Q99929 193 aa12.99□□□□□ -0.33
HLCS-205ENST00000448340 A0A0J9YX75 114 aa12.98□□□□□ -0.33
HLCS-205ENST00000448340 F6UB75 175 aa12.98□□□□□ -0.33
HLCS-205ENST00000448340 UBE2CO00762 179 aa12.98□□□□□ -0.33
HLCS-205ENST00000448340 GCHFRP30047 84 aa12.98□□□□□ -0.33
HLCS-205ENST00000448340 CASC10Q5T4H9 136 aa12.98□□□□□ -0.33
HLCS-205ENST00000448340 SUN5Q8TC36 379 aa12.98□□□□□ -0.33
HLCS-205ENST00000448340 PHYHIPLQ96FC7 376 aa12.98□□□□□ -0.33
HLCS-205ENST00000448340 CLUHP3Q96NS8 147 aa12.98□□□□□ -0.33
HLCS-205ENST00000448340 CSTL1Q9H114 145 aa12.98□□□□□ -0.33
HLCS-205ENST00000448340 TMEM167BQ9NRX6 74 aa12.98□□□□□ -0.33
HLCS-205ENST00000448340 MAP1LC3B2A6NCE7 125 aa12.97□□□□□ -0.33
HLCS-205ENST00000448340 ZNF705FA8MVS1 300 aaPredicted RBP12.97□□□□□ -0.33
HLCS-205ENST00000448340 DUSP14O95147 198 aaKnown RBP12.97□□□□□ -0.33
HLCS-205ENST00000448340 FHITP49789 147 aa12.97□□□□□ -0.33
HLCS-205ENST00000448340 RAB5CP51148 216 aa12.97□□□□□ -0.33
HLCS-205ENST00000448340 RANP62826 216 aaKnown RBP12.97□□□□□ -0.33
HLCS-205ENST00000448340 MORN3Q6PF18 240 aaPredicted RBP12.97□□□□□ -0.33
HLCS-205ENST00000448340 EXOC3-AS1Q8N2X6 119 aa12.97□□□□□ -0.33
HLCS-205ENST00000448340 MAP1LC3BQ9GZQ8 125 aa12.97□□□□□ -0.33
HLCS-205ENST00000448340 ICAM4Q14773 271 aa12.96□□□□□ -0.33
HLCS-205ENST00000448340 OR8A1Q8NGG7 326 aa12.96□□□□□ -0.33
HLCS-205ENST00000448340 FAM213BQ8TBF2 198 aa12.96□□□□□ -0.33
HLCS-205ENST00000448340 TM2D3Q9BRN9 247 aa12.96□□□□□ -0.33
HLCS-205ENST00000448340 Q9H3A6 140 aa12.96□□□□□ -0.33
HLCS-205ENST00000448340 BOLA1Q9Y3E2 137 aa12.96□□□□□ -0.33
HLCS-205ENST00000448340 A8MTW9 85 aa12.95□□□□□ -0.34
HLCS-205ENST00000448340 M0R3E3 92 aa12.95□□□□□ -0.34
HLCS-205ENST00000448340 SULT1A2P50226 295 aa12.95□□□□□ -0.34
HLCS-205ENST00000448340 CNN1P51911 297 aaKnown RBP12.95□□□□□ -0.34
HLCS-205ENST00000448340 NUTF2P61970 127 aaKnown RBP12.95□□□□□ -0.34
HLCS-205ENST00000448340 OR4B1Q8NGF8 309 aa12.95□□□□□ -0.34
HLCS-205ENST00000448340 MUC7Q8TAX7 377 aa12.95□□□□□ -0.34
HLCS-205ENST00000448340 MBD3L1Q8WWY6 194 aa12.95□□□□□ -0.34
HLCS-205ENST00000448340 PRAC2D3DTV9 90 aa12.94□□□□□ -0.34
HLCS-205ENST00000448340 ZNF705DP0CH99 300 aaPredicted RBP12.94□□□□□ -0.34
HLCS-205ENST00000448340 ZNF705BP0CI00 300 aaPredicted RBP12.94□□□□□ -0.34
HLCS-205ENST00000448340 FGF8P55075 233 aaPredicted RBP12.94□□□□□ -0.34
HLCS-205ENST00000448340 HIST1H1AQ02539 215 aaPredicted RBP12.94□□□□□ -0.34
HLCS-205ENST00000448340 FAM74A1Q5RGS3 127 aa12.94□□□□□ -0.34
HLCS-205ENST00000448340 Q6ZWC4 215 aa12.94□□□□□ -0.34
HLCS-205ENST00000448340 IQCF2Q8IXL9 164 aa12.94□□□□□ -0.34
HLCS-205ENST00000448340 LYSTQ99698 3801 aa12.94□□□□□ -0.34
HLCS-205ENST00000448340 SPATA25Q9BR10 227 aa12.94□□□□□ -0.34
HLCS-205ENST00000448340 OTORQ9NRC9 128 aa12.94□□□□□ -0.34
HLCS-205ENST00000448340 IGKV3-20P01619 116 aa12.93□□□□□ -0.34
HLCS-205ENST00000448340 H2AFB1P0C5Y9 115 aa12.93□□□□□ -0.34
HLCS-205ENST00000448340 CSN1S1P47710 185 aa12.93□□□□□ -0.34
HLCS-205ENST00000448340 OR10J6PQ8NGY7 276 aa12.93□□□□□ -0.34
HLCS-205ENST00000448340 SFT2D1Q8WV19 159 aa12.93□□□□□ -0.34
HLCS-205ENST00000448340 ZMAT4Q9H898 229 aa12.93□□□□□ -0.34
HLCS-205ENST00000448340 PGPA6NDG6 321 aa12.92□□□□□ -0.34
HLCS-205ENST00000448340 BOLA2-SMG1P6H3BVE0 249 aa12.92□□□□□ -0.34
HLCS-205ENST00000448340 CA1P00915 261 aaPredicted RBP12.92□□□□□ -0.34
HLCS-205ENST00000448340 ARL6IP6Q8N6S5 226 aa12.92□□□□□ -0.34
HLCS-205ENST00000448340 RXFP4Q8TDU9 374 aa12.92□□□□□ -0.34
HLCS-205ENST00000448340 TMPRSS5Q9H3S3 457 aa12.92□□□□□ -0.34
HLCS-205ENST00000448340 A0A1W2PRE2 83 aa12.91□□□□□ -0.34
HLCS-205ENST00000448340 GIG44P09565 113 aaPredicted RBP12.91□□□□□ -0.34
HLCS-205ENST00000448340 PRB4P10163 310 aaPredicted RBP12.91□□□□□ -0.34
HLCS-205ENST00000448340 AMTNQ6UX39 209 aa12.91□□□□□ -0.34
HLCS-205ENST00000448340 C1QTNF4Q9BXJ3 329 aa12.91□□□□□ -0.34
HLCS-205ENST00000448340 TP53TG1Q9Y2A0 90 aa12.91□□□□□ -0.34
HLCS-205ENST00000448340 NPIPB6E9PJ23 425 aa12.9□□□□□ -0.34
HLCS-205ENST00000448340 DEFB135Q30KP9 77 aa12.9□□□□□ -0.34
HLCS-205ENST00000448340 CMTM2Q8TAZ6 248 aa12.9□□□□□ -0.34
HLCS-205ENST00000448340 CSMD3Q7Z407 3707 aa12.89□□□□□ -0.35
HLCS-205ENST00000448340 TRAV1-1A0A0B4J248 108 aa12.89□□□□□ -0.35
HLCS-205ENST00000448340 LCE6AA0A183 80 aa12.89□□□□□ -0.35
HLCS-205ENST00000448340 ALKAL2Q6UX46 152 aa12.89□□□□□ -0.35
HLCS-205ENST00000448340 C9orf47Q6ZRZ4 202 aa12.89□□□□□ -0.35
HLCS-205ENST00000448340 RNF183Q96D59 192 aa12.89□□□□□ -0.35
HLCS-205ENST00000448340 LINC00477Q96M19 166 aa12.89□□□□□ -0.35
HLCS-205ENST00000448340 RCHY1Q96PM5 261 aa12.89□□□□□ -0.35
HLCS-205ENST00000448340 NKX6-2Q9C056 277 aaPredicted RBP12.89□□□□□ -0.35
HLCS-205ENST00000448340 SLC35B3Q9H1N7 401 aa12.89□□□□□ -0.35
HLCS-205ENST00000448340 PPP1R14DQ9NXH3 145 aa12.89□□□□□ -0.35
HLCS-205ENST00000448340 RBAKDNA6NC62 111 aa12.88□□□□□ -0.35
HLCS-205ENST00000448340 DIRC3C9JPN6 131 aa12.88□□□□□ -0.35
HLCS-205ENST00000448340 TEX46H3BTG2 121 aa12.88□□□□□ -0.35
HLCS-205ENST00000448340 SPRY2O43597 315 aa12.88□□□□□ -0.35
HLCS-205ENST00000448340 AMBPP02760 352 aa12.88□□□□□ -0.35
HLCS-205ENST00000448340 SUMO1P63165 101 aaKnown RBP12.88□□□□□ -0.35
HLCS-205ENST00000448340 C5orf17Q8NAS9 161 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms