RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 PIEZO2Q9H5I5 2752 aa15.23■□□□□ 0.03
HMGA1-205ENST00000447654 CENPVL3A0A0U1RRI6 287 aa15.22■□□□□ 0.03
HMGA1-205ENST00000447654 WNT9BO14905 357 aa15.22■□□□□ 0.03
HMGA1-205ENST00000447654 ZNF134P52741 427 aa15.22■□□□□ 0.03
HMGA1-205ENST00000447654 PPP1R35Q8TAP8 253 aa15.22■□□□□ 0.03
HMGA1-205ENST00000447654 CACNA1DQ01668 2161 aa15.22■□□□□ 0.03
HMGA1-205ENST00000447654 CEP295Q9C0D2 2601 aa15.22■□□□□ 0.03
HMGA1-205ENST00000447654 TRBV7-3A0A075B6L6 115 aa15.22■□□□□ 0.03
HMGA1-205ENST00000447654 ZCCHC24Q8N2G6 241 aaKnown RBP15.22■□□□□ 0.03
HMGA1-205ENST00000447654 FABP5P3A8MUU1 101 aa15.21■□□□□ 0.03
HMGA1-205ENST00000447654 MYOD1P15172 320 aa15.21■□□□□ 0.03
HMGA1-205ENST00000447654 CXXC4Q9H2H0 198 aa15.21■□□□□ 0.03
HMGA1-205ENST00000447654 HIF1ANQ9NWT6 349 aa15.21■□□□□ 0.03
HMGA1-205ENST00000447654 IGKV1D-37A0A075B6S9 117 aa15.21■□□□□ 0.02
HMGA1-205ENST00000447654 TRAV17A0A0B4J275 112 aa15.21■□□□□ 0.02
HMGA1-205ENST00000447654 ZNF785A8K8V0 405 aa15.21■□□□□ 0.02
HMGA1-205ENST00000447654 J3KRW8 73 aa15.21■□□□□ 0.02
HMGA1-205ENST00000447654 CNIH1O95406 144 aa15.21■□□□□ 0.02
HMGA1-205ENST00000447654 IL4P05112 153 aa15.21■□□□□ 0.02
HMGA1-205ENST00000447654 GP9P14770 177 aa15.21■□□□□ 0.02
HMGA1-205ENST00000447654 ASIPP42127 132 aa15.21■□□□□ 0.02
HMGA1-205ENST00000447654 SBSPONQ8IVN8 264 aa15.21■□□□□ 0.02
HMGA1-205ENST00000447654 CIARTQ8N365 385 aaPredicted RBP15.21■□□□□ 0.02
HMGA1-205ENST00000447654 HIST1H4GQ99525 98 aa15.21■□□□□ 0.02
HMGA1-205ENST00000447654 HOXA3O43365 443 aaPredicted RBP15.2■□□□□ 0.02
HMGA1-205ENST00000447654 IGLV2-11P01706 119 aa15.2■□□□□ 0.02
HMGA1-205ENST00000447654 RBP4P02753 201 aa15.2■□□□□ 0.02
HMGA1-205ENST00000447654 FCER1GP30273 86 aa15.2■□□□□ 0.02
HMGA1-205ENST00000447654 Q6ZT83 130 aa15.2■□□□□ 0.02
HMGA1-205ENST00000447654 DKK4Q9UBT3 224 aa15.2■□□□□ 0.02
HMGA1-205ENST00000447654 CADP27708 2225 aa15.2■□□□□ 0.02
HMGA1-205ENST00000447654 BRI3O95415 125 aa15.19■□□□□ 0.02
HMGA1-205ENST00000447654 NDUFV3P56181 108 aaKnown RBP15.19■□□□□ 0.02
HMGA1-205ENST00000447654 MORN3Q6PF18 240 aaPredicted RBP15.19■□□□□ 0.02
HMGA1-205ENST00000447654 CARD19Q96LW7 228 aa15.19■□□□□ 0.02
HMGA1-205ENST00000447654 NDUFA4L2Q9NRX3 87 aa15.19■□□□□ 0.02
HMGA1-205ENST00000447654 TMEM75Q8N9X5 138 aa15.19■□□□□ 0.02
HMGA1-205ENST00000447654 DCTN5Q9BTE1 182 aa15.19■□□□□ 0.02
HMGA1-205ENST00000447654 MAP1LC3AQ9H492 121 aa15.19■□□□□ 0.02
HMGA1-205ENST00000447654 METRNQ9UJH8 293 aa15.19■□□□□ 0.02
HMGA1-205ENST00000447654 ADGRG4Q8IZF6 3080 aa15.18■□□□□ 0.02
HMGA1-205ENST00000447654 SAA2P0DJI9 122 aaPredicted RBP15.18■□□□□ 0.02
HMGA1-205ENST00000447654 PPIFP30405 207 aaKnown RBP15.18■□□□□ 0.02
HMGA1-205ENST00000447654 ZC2HC1BQ5TFG8 222 aa15.18■□□□□ 0.02
HMGA1-205ENST00000447654 IGF2-ASQ6U949 168 aa15.18■□□□□ 0.02
HMGA1-205ENST00000447654 GLMPQ8WWB7 406 aa15.18■□□□□ 0.02
HMGA1-205ENST00000447654 RPEQ96AT9 228 aa15.18■□□□□ 0.02
HMGA1-205ENST00000447654 SLC25A39Q9BZJ4 359 aaPredicted RBP15.18■□□□□ 0.02
HMGA1-205ENST00000447654 DYSFO75923 2080 aa15.18■□□□□ 0.02
HMGA1-205ENST00000447654 M0QXV9 152 aa15.18■□□□□ 0.02
HMGA1-205ENST00000447654 CEACAM4O75871 244 aa15.18■□□□□ 0.02
HMGA1-205ENST00000447654 MRPL51Q4U2R6 128 aaKnown RBP15.18■□□□□ 0.02
HMGA1-205ENST00000447654 C1orf229Q6ZS94 237 aaPredicted RBP15.18■□□□□ 0.02
HMGA1-205ENST00000447654 SEM1Q6ZVN7 128 aa15.18■□□□□ 0.02
HMGA1-205ENST00000447654 NPIPB3Q92617 1050 aa15.18■□□□□ 0.02
HMGA1-205ENST00000447654 TTTY13Q9BZ97 58 aa15.18■□□□□ 0.02
HMGA1-205ENST00000447654 TANC2Q9HCD6 1990 aa15.18■□□□□ 0.02
HMGA1-205ENST00000447654 A0A087WX48 190 aa15.17■□□□□ 0.02
HMGA1-205ENST00000447654 K7EM74 188 aa15.17■□□□□ 0.02
HMGA1-205ENST00000447654 GAGE2BQ13066 116 aa15.17■□□□□ 0.02
HMGA1-205ENST00000447654 GAGE2EQ4V326 116 aa15.17■□□□□ 0.02
HMGA1-205ENST00000447654 TMEM14CQ9P0S9 112 aa15.17■□□□□ 0.02
HMGA1-205ENST00000447654 GAGE2DQ9UEU5 116 aa15.17■□□□□ 0.02
HMGA1-205ENST00000447654 APC2O95996 2303 aa15.17■□□□□ 0.02
HMGA1-205ENST00000447654 PRDX2P32119 198 aa15.17■□□□□ 0.02
HMGA1-205ENST00000447654 PRNTQ86SH4 94 aa15.17■□□□□ 0.02
HMGA1-205ENST00000447654 GTSCR1Q86UQ5 136 aa15.17■□□□□ 0.02
HMGA1-205ENST00000447654 OBP2BQ9NPH6 170 aa15.17■□□□□ 0.02
HMGA1-205ENST00000447654 NXT2Q9NPJ8 142 aaKnown RBP15.17■□□□□ 0.02
HMGA1-205ENST00000447654 TRBV20-1A0A075B6N2 111 aa15.16■□□□□ 0.02
HMGA1-205ENST00000447654 FAM90A27PA6NNH2 459 aa15.16■□□□□ 0.02
HMGA1-205ENST00000447654 PRSS1P07477 247 aa15.16■□□□□ 0.02
HMGA1-205ENST00000447654 EDDM3AQ14507 147 aa15.16■□□□□ 0.02
HMGA1-205ENST00000447654 ZNF826PQ6ZT77 177 aa15.16■□□□□ 0.02
HMGA1-205ENST00000447654 CD177Q8N6Q3 437 aa15.16■□□□□ 0.02
HMGA1-205ENST00000447654 TRGV9Q99603 122 aa15.16■□□□□ 0.02
HMGA1-205ENST00000447654 HEATR1Q9H583 2144 aaKnown RBP15.16■□□□□ 0.02
HMGA1-205ENST00000447654 IGKV3-15P01624 115 aa15.15■□□□□ 0.02
HMGA1-205ENST00000447654 KLF14Q8TD94 323 aaPredicted RBP15.15■□□□□ 0.02
HMGA1-205ENST00000447654 CALYQ9NYX4 217 aa15.15■□□□□ 0.02
HMGA1-205ENST00000447654 FZR1Q9UM11 496 aa15.15■□□□□ 0.02
HMGA1-205ENST00000447654 ACACAQ13085 2346 aa15.15■□□□□ 0.02
HMGA1-205ENST00000447654 CKS2P33552 79 aa15.15■□□□□ 0.02
HMGA1-205ENST00000447654 UBE2D3P61077 147 aa15.15■□□□□ 0.02
HMGA1-205ENST00000447654 UBE2D2P62837 147 aa15.15■□□□□ 0.02
HMGA1-205ENST00000447654 AMN1Q8IY45 258 aa15.15■□□□□ 0.02
HMGA1-205ENST00000447654 KALRNO60229 2985 aa15.15■□□□□ 0.02
HMGA1-205ENST00000447654 NCBP2LA6PVI3 153 aaKnown RBP15.14■□□□□ 0.01
HMGA1-205ENST00000447654 IFITM1P13164 125 aa15.14■□□□□ 0.01
HMGA1-205ENST00000447654 PRR30Q53SZ7 412 aaPredicted RBP15.14■□□□□ 0.01
HMGA1-205ENST00000447654 CXorf67Q86X51 503 aaPredicted RBP15.14■□□□□ 0.01
HMGA1-205ENST00000447654 YAE1D1Q9NRH1 226 aa15.14■□□□□ 0.01
HMGA1-205ENST00000447654 SSUH2Q9Y2M2 353 aa15.14■□□□□ 0.01
HMGA1-205ENST00000447654 CGB3P0DN86 165 aa15.14■□□□□ 0.01
HMGA1-205ENST00000447654 CGB7P0DN87 165 aa15.14■□□□□ 0.01
HMGA1-205ENST00000447654 A8MWV9 139 aa15.13■□□□□ 0.01
HMGA1-205ENST00000447654 PLAUP00749 431 aa15.13■□□□□ 0.01
HMGA1-205ENST00000447654 NPYP01303 97 aa15.13■□□□□ 0.01
HMGA1-205ENST00000447654 TFF1P04155 84 aa15.13■□□□□ 0.01
HMGA1-205ENST00000447654 TMEM30BQ3MIR4 351 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms