RNA–Protein interactions for RNA: ENST00000447025.6

MCF2L2-203, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best) BASIC

Gene MCF2L2, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-203ENST00000447025 MFAP2P55001 183 aa6.76□□□□□ -1.33
MCF2L2-203ENST00000447025 ZNF503Q96F45 646 aa6.76□□□□□ -1.33
MCF2L2-203ENST00000447025 RAI1Q7Z5J4 1906 aaPredicted RBP6.76□□□□□ -1.33
MCF2L2-203ENST00000447025 GOLGA4Q13439 2230 aaKnown RBP6.76□□□□□ -1.33
MCF2L2-203ENST00000447025 H3BMM0 161 aa6.75□□□□□ -1.33
MCF2L2-203ENST00000447025 IGKV1D-16P01601 117 aa6.75□□□□□ -1.33
MCF2L2-203ENST00000447025 RPL18Q07020 188 aaKnown RBP6.75□□□□□ -1.33
MCF2L2-203ENST00000447025 WDR38Q5JTN6 314 aa6.75□□□□□ -1.33
MCF2L2-203ENST00000447025 LY6G5BQ8NDX9 201 aa6.75□□□□□ -1.33
MCF2L2-203ENST00000447025 UBE2WQ96B02 151 aa6.75□□□□□ -1.33
MCF2L2-203ENST00000447025 HIST1H4GQ99525 98 aa6.75□□□□□ -1.33
MCF2L2-203ENST00000447025 SRXN1Q9BYN0 137 aa6.75□□□□□ -1.33
MCF2L2-203ENST00000447025 TRBV19A0A075B6N1 114 aa6.75□□□□□ -1.33
MCF2L2-203ENST00000447025 SAA4P35542 130 aa6.75□□□□□ -1.33
MCF2L2-203ENST00000447025 MRPS36P82909 103 aaKnown RBP6.75□□□□□ -1.33
MCF2L2-203ENST00000447025 CALYQ9NYX4 217 aa6.75□□□□□ -1.33
MCF2L2-203ENST00000447025 VPS13AQ96RL7 3174 aa6.75□□□□□ -1.33
MCF2L2-203ENST00000447025 TRAV41A0A0B4J266 112 aa6.74□□□□□ -1.33
MCF2L2-203ENST00000447025 A0A1B0GXF2 115 aa6.74□□□□□ -1.33
MCF2L2-203ENST00000447025 LINC01549A6NIU2 74 aa6.74□□□□□ -1.33
MCF2L2-203ENST00000447025 UPK2O00526 184 aa6.74□□□□□ -1.33
MCF2L2-203ENST00000447025 MRPS12O15235 138 aaKnown RBP6.74□□□□□ -1.33
MCF2L2-203ENST00000447025 UBE2D1P51668 147 aa6.74□□□□□ -1.33
MCF2L2-203ENST00000447025 LINC01590Q5TEZ4 76 aa6.74□□□□□ -1.33
MCF2L2-203ENST00000447025 AAMDCQ9H7C9 122 aa6.74□□□□□ -1.33
MCF2L2-203ENST00000447025 PLXNA2O75051 1894 aa6.74□□□□□ -1.33
MCF2L2-203ENST00000447025 ARHGEF17Q96PE2 2063 aaPredicted RBP6.74□□□□□ -1.33
MCF2L2-203ENST00000447025 GON4LQ3T8J9 2241 aa6.74□□□□□ -1.33
MCF2L2-203ENST00000447025 WDFY4Q6ZS81 3184 aa6.74□□□□□ -1.33
MCF2L2-203ENST00000447025 BRWD1Q9NSI6 2320 aa6.74□□□□□ -1.33
MCF2L2-203ENST00000447025 PLAC8L1A1L4L8 177 aa6.74□□□□□ -1.33
MCF2L2-203ENST00000447025 CISD3P0C7P0 127 aa6.74□□□□□ -1.33
MCF2L2-203ENST00000447025 ORMDL2Q53FV1 153 aa6.74□□□□□ -1.33
MCF2L2-203ENST00000447025 C9orf57Q5W0N0 161 aa6.74□□□□□ -1.33
MCF2L2-203ENST00000447025 EEF1AKMT3Q96AZ1 226 aa6.74□□□□□ -1.33
MCF2L2-203ENST00000447025 CYYR1Q96J86 154 aa6.74□□□□□ -1.33
MCF2L2-203ENST00000447025 IGKV2D-26A0A0A0MRZ7 120 aa6.73□□□□□ -1.33
MCF2L2-203ENST00000447025 A0A0A6YYD4 124 aa6.73□□□□□ -1.33
MCF2L2-203ENST00000447025 A0A1B0GVT2 93 aa6.73□□□□□ -1.33
MCF2L2-203ENST00000447025 SRSF10O75494 262 aaKnown RBP6.73□□□□□ -1.33
MCF2L2-203ENST00000447025 CA6P23280 308 aa6.73□□□□□ -1.33
MCF2L2-203ENST00000447025 PCBD1P61457 104 aa6.73□□□□□ -1.33
MCF2L2-203ENST00000447025 CACNG7P62955 275 aa6.73□□□□□ -1.33
MCF2L2-203ENST00000447025 RPL18AQ02543 176 aaKnown RBP6.73□□□□□ -1.33
MCF2L2-203ENST00000447025 BEAN1Q3B7T3 259 aa6.73□□□□□ -1.33
MCF2L2-203ENST00000447025 RPRMLQ8N4K4 120 aa6.73□□□□□ -1.33
MCF2L2-203ENST00000447025 CD177Q8N6Q3 437 aa6.73□□□□□ -1.33
MCF2L2-203ENST00000447025 ZNF414Q96IQ9 312 aa6.73□□□□□ -1.33
MCF2L2-203ENST00000447025 S1PR3Q99500 378 aa6.73□□□□□ -1.33
MCF2L2-203ENST00000447025 FGF22Q9HCT0 170 aa6.73□□□□□ -1.33
MCF2L2-203ENST00000447025 TIMM13Q9Y5L4 95 aaPredicted RBP6.73□□□□□ -1.33
MCF2L2-203ENST00000447025 PTPRDP23468 1912 aa6.73□□□□□ -1.33
MCF2L2-203ENST00000447025 DMDP11532 3685 aa6.73□□□□□ -1.33
MCF2L2-203ENST00000447025 TEX49A0A1B0GTD5 131 aa6.73□□□□□ -1.33
MCF2L2-203ENST00000447025 H3BSH0 61 aa6.73□□□□□ -1.33
MCF2L2-203ENST00000447025 SNRPD3P62318 126 aaKnown RBP6.73□□□□□ -1.33
MCF2L2-203ENST00000447025 FXYD3Q14802 87 aa6.73□□□□□ -1.33
MCF2L2-203ENST00000447025 C9orf139Q6ZV77 190 aa6.73□□□□□ -1.33
MCF2L2-203ENST00000447025 TM2D3Q9BRN9 247 aa6.73□□□□□ -1.33
MCF2L2-203ENST00000447025 LHFPL6Q9Y693 200 aa6.73□□□□□ -1.33
MCF2L2-203ENST00000447025 UBE2L5PA0A1B0GUS4 154 aa6.72□□□□□ -1.33
MCF2L2-203ENST00000447025 CLLU1OSQ5K130 101 aa6.72□□□□□ -1.33
MCF2L2-203ENST00000447025 C20orf204Q6ZNR8 217 aa6.72□□□□□ -1.33
MCF2L2-203ENST00000447025 Q6ZR03 302 aa6.72□□□□□ -1.33
MCF2L2-203ENST00000447025 SEM1Q6ZVN7 128 aa6.72□□□□□ -1.33
MCF2L2-203ENST00000447025 PFN4Q8NHR9 129 aa6.72□□□□□ -1.33
MCF2L2-203ENST00000447025 LSM4Q9Y4Z0 139 aaKnown RBP6.72□□□□□ -1.33
MCF2L2-203ENST00000447025 TMEM14AQ9Y6G1 99 aa6.72□□□□□ -1.33
MCF2L2-203ENST00000447025 SRRM4A7MD48 611 aaKnown RBP6.72□□□□□ -1.33
MCF2L2-203ENST00000447025 PEX7O00628 323 aa6.72□□□□□ -1.33
MCF2L2-203ENST00000447025 IFI6P09912 130 aa6.72□□□□□ -1.33
MCF2L2-203ENST00000447025 CFHR3Q02985 330 aa6.72□□□□□ -1.33
MCF2L2-203ENST00000447025 MSMPQ1L6U9 139 aa6.72□□□□□ -1.33
MCF2L2-203ENST00000447025 CNRIP1Q96F85 164 aaPredicted RBP6.72□□□□□ -1.33
MCF2L2-203ENST00000447025 C8orf87E5RJ46 101 aa6.71□□□□□ -1.34
MCF2L2-203ENST00000447025 GP1BBP13224 206 aa6.71□□□□□ -1.34
MCF2L2-203ENST00000447025 SS18Q15532 418 aa6.71□□□□□ -1.34
MCF2L2-203ENST00000447025 CENPWQ5EE01 88 aa6.71□□□□□ -1.34
MCF2L2-203ENST00000447025 FAM104BQ5XKR9 115 aa6.71□□□□□ -1.34
MCF2L2-203ENST00000447025 OR8A1Q8NGG7 326 aa6.71□□□□□ -1.34
MCF2L2-203ENST00000447025 SPATA3Q8NHX4 192 aa6.71□□□□□ -1.34
MCF2L2-203ENST00000447025 IFI27L1Q96BM0 104 aa6.71□□□□□ -1.34
MCF2L2-203ENST00000447025 ARHGAP5-AS1Q96IT6 56 aa6.71□□□□□ -1.34
MCF2L2-203ENST00000447025 ZNF823P16415 610 aa6.71□□□□□ -1.34
MCF2L2-203ENST00000447025 SYNJ2BPP57105 145 aa6.71□□□□□ -1.34
MCF2L2-203ENST00000447025 DEFB103AP81534 67 aa6.71□□□□□ -1.34
MCF2L2-203ENST00000447025 SDIM1Q6ZPB5 146 aa6.71□□□□□ -1.34
MCF2L2-203ENST00000447025 HBBP68871 147 aa6.7□□□□□ -1.34
MCF2L2-203ENST00000447025 MDP1Q86V88 176 aa6.7□□□□□ -1.34
MCF2L2-203ENST00000447025 CXXC4Q9H2H0 198 aa6.7□□□□□ -1.34
MCF2L2-203ENST00000447025 SLC25A15Q9Y619 301 aa6.7□□□□□ -1.34
MCF2L2-203ENST00000447025 PIGBOS1A0A0B4J2F0 54 aa6.69□□□□□ -1.34
MCF2L2-203ENST00000447025 IGHV1-58A0A0C4DH39 117 aa6.69□□□□□ -1.34
MCF2L2-203ENST00000447025 TRBV10-2A0A0K0K1G8 114 aa6.69□□□□□ -1.34
MCF2L2-203ENST00000447025 H3BP45 60 aa6.69□□□□□ -1.34
MCF2L2-203ENST00000447025 FCER1GP30273 86 aa6.69□□□□□ -1.34
MCF2L2-203ENST00000447025 FHL1Q13642 323 aa6.69□□□□□ -1.34
MCF2L2-203ENST00000447025 NSUN5P1Q3KNT7 163 aa6.69□□□□□ -1.34
MCF2L2-203ENST00000447025 MIC13Q5XKP0 118 aa6.69□□□□□ -1.34
MCF2L2-203ENST00000447025 NT5CQ8TCD5 201 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms