RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 ARL3P36405 182 aa7.36□□□□□ -1.23
COL6A4P1-201ENST00000446690 PDE6HQ13956 83 aa7.36□□□□□ -1.23
COL6A4P1-201ENST00000446690 SMIM12Q96EX1 92 aa7.36□□□□□ -1.23
COL6A4P1-201ENST00000446690 NAT8BQ9UHF3 227 aa7.36□□□□□ -1.23
COL6A4P1-201ENST00000446690 PSG8Q9UQ74 426 aa7.36□□□□□ -1.23
COL6A4P1-201ENST00000446690 POLQO75417 2590 aa7.36□□□□□ -1.23
COL6A4P1-201ENST00000446690 IZUMO1RA6ND01 250 aa7.36□□□□□ -1.23
COL6A4P1-201ENST00000446690 BUB3O43684 328 aa7.36□□□□□ -1.23
COL6A4P1-201ENST00000446690 TRBV12-3P01733 135 aa7.36□□□□□ -1.23
COL6A4P1-201ENST00000446690 HLA-DMBP28068 263 aa7.36□□□□□ -1.23
COL6A4P1-201ENST00000446690 PPIFP30405 207 aaKnown RBP7.36□□□□□ -1.23
COL6A4P1-201ENST00000446690 PSG3Q16557 428 aa7.36□□□□□ -1.23
COL6A4P1-201ENST00000446690 TMEM95Q3KNT9 176 aa7.36□□□□□ -1.23
COL6A4P1-201ENST00000446690 NUP35Q8NFH5 326 aa7.36□□□□□ -1.23
COL6A4P1-201ENST00000446690 METTL26Q96S19 204 aa7.36□□□□□ -1.23
COL6A4P1-201ENST00000446690 NAGKQ9UJ70 344 aa7.36□□□□□ -1.23
COL6A4P1-201ENST00000446690 IGKV2-40A0A087WW87 121 aaPredicted RBP7.35□□□□□ -1.23
COL6A4P1-201ENST00000446690 A0A1B0GUS0 222 aa7.35□□□□□ -1.23
COL6A4P1-201ENST00000446690 CLPSL1A2RUU4 121 aa7.35□□□□□ -1.23
COL6A4P1-201ENST00000446690 HIGD1CA8MV81 97 aa7.35□□□□□ -1.23
COL6A4P1-201ENST00000446690 ZNF705FA8MVS1 300 aaPredicted RBP7.35□□□□□ -1.23
COL6A4P1-201ENST00000446690 IGKV2D-40P01614 121 aaPredicted RBP7.35□□□□□ -1.23
COL6A4P1-201ENST00000446690 CRIP2P52943 208 aaPredicted RBP7.35□□□□□ -1.23
COL6A4P1-201ENST00000446690 KIAA1644Q3SXP7 199 aa7.35□□□□□ -1.23
COL6A4P1-201ENST00000446690 ZNF705AQ6ZN79 300 aaPredicted RBP7.35□□□□□ -1.23
COL6A4P1-201ENST00000446690 TCF24Q7RTU0 167 aa7.35□□□□□ -1.23
COL6A4P1-201ENST00000446690 TMEM75Q8N9X5 138 aa7.35□□□□□ -1.23
COL6A4P1-201ENST00000446690 TSKUQ8WUA8 353 aa7.35□□□□□ -1.23
COL6A4P1-201ENST00000446690 MBD6Q96DN6 1003 aa7.35□□□□□ -1.23
COL6A4P1-201ENST00000446690 GNB1LQ9BYB4 327 aa7.35□□□□□ -1.23
COL6A4P1-201ENST00000446690 RPP21Q9H633 154 aaKnown RBP7.35□□□□□ -1.23
COL6A4P1-201ENST00000446690 ZNF331Q9NQX6 463 aaPredicted RBP7.35□□□□□ -1.23
COL6A4P1-201ENST00000446690 ZC2HC1AQ96GY0 325 aa7.35□□□□□ -1.23
COL6A4P1-201ENST00000446690 CAMPP49913 170 aa7.34□□□□□ -1.23
COL6A4P1-201ENST00000446690 WDR73Q6P4I2 378 aa7.34□□□□□ -1.23
COL6A4P1-201ENST00000446690 TMEM136Q6ZRR5 245 aa7.34□□□□□ -1.23
COL6A4P1-201ENST00000446690 LRRC75A-AS1Q8N1F1 130 aa7.34□□□□□ -1.23
COL6A4P1-201ENST00000446690 C8orf49Q96NF6 230 aa7.34□□□□□ -1.23
COL6A4P1-201ENST00000446690 ZFP30Q9Y2G7 519 aa7.34□□□□□ -1.23
COL6A4P1-201ENST00000446690 C19orf71A6NCJ1 209 aa7.34□□□□□ -1.23
COL6A4P1-201ENST00000446690 CHEK1O14757 476 aa7.34□□□□□ -1.23
COL6A4P1-201ENST00000446690 CRISP2P16562 243 aa7.34□□□□□ -1.23
COL6A4P1-201ENST00000446690 RAB9AP51151 201 aa7.34□□□□□ -1.23
COL6A4P1-201ENST00000446690 PRR31Q5SQ13 230 aa7.34□□□□□ -1.23
COL6A4P1-201ENST00000446690 DMRTA1Q5VZB9 504 aa7.34□□□□□ -1.23
COL6A4P1-201ENST00000446690 TMEM256Q8N2U0 113 aa7.34□□□□□ -1.23
COL6A4P1-201ENST00000446690 RNF182Q8N6D2 247 aa7.34□□□□□ -1.23
COL6A4P1-201ENST00000446690 OR4X2Q8NGF9 303 aa7.34□□□□□ -1.23
COL6A4P1-201ENST00000446690 OR2D3Q8NGH3 330 aa7.34□□□□□ -1.23
COL6A4P1-201ENST00000446690 USMG5Q96IX5 58 aa7.34□□□□□ -1.23
COL6A4P1-201ENST00000446690 PGLYRP4Q96LB8 373 aa7.34□□□□□ -1.23
COL6A4P1-201ENST00000446690 PRSS22Q9GZN4 317 aa7.34□□□□□ -1.23
COL6A4P1-201ENST00000446690 CENPEQ02224 2701 aa7.34□□□□□ -1.24
COL6A4P1-201ENST00000446690 A8MWL6 223 aa7.33□□□□□ -1.24
COL6A4P1-201ENST00000446690 PLA2G2AP14555 144 aa7.33□□□□□ -1.24
COL6A4P1-201ENST00000446690 LCN12Q6JVE5 192 aa7.33□□□□□ -1.24
COL6A4P1-201ENST00000446690 UNQ9165/PRO28630Q6UXU0 137 aa7.33□□□□□ -1.24
COL6A4P1-201ENST00000446690 ZNF492Q9P255 531 aa7.33□□□□□ -1.24
COL6A4P1-201ENST00000446690 ANKRD17O75179 2603 aaKnown RBP7.33□□□□□ -1.24
COL6A4P1-201ENST00000446690 J3QKU1 62 aa7.33□□□□□ -1.24
COL6A4P1-201ENST00000446690 SMAD7O15105 426 aaKnown RBP7.33□□□□□ -1.24
COL6A4P1-201ENST00000446690 NUPR1O60356 82 aa7.33□□□□□ -1.24
COL6A4P1-201ENST00000446690 APCSP02743 223 aa7.33□□□□□ -1.24
COL6A4P1-201ENST00000446690 ZNF705DP0CH99 300 aaPredicted RBP7.33□□□□□ -1.24
COL6A4P1-201ENST00000446690 ZNF705BP0CI00 300 aaPredicted RBP7.33□□□□□ -1.24
COL6A4P1-201ENST00000446690 Q8TAT8 98 aa7.33□□□□□ -1.24
COL6A4P1-201ENST00000446690 GTSF1Q8WW33 167 aa7.33□□□□□ -1.24
COL6A4P1-201ENST00000446690 VGLL1Q99990 258 aa7.33□□□□□ -1.24
COL6A4P1-201ENST00000446690 C20orf144Q9BQM9 153 aa7.33□□□□□ -1.24
COL6A4P1-201ENST00000446690 MIEN1Q9BRT3 115 aa7.33□□□□□ -1.24
COL6A4P1-201ENST00000446690 TRBV6-1A0A0K0K1D8 114 aa7.32□□□□□ -1.24
COL6A4P1-201ENST00000446690 H3BUA1 57 aa7.32□□□□□ -1.24
COL6A4P1-201ENST00000446690 MT-ND6P03923 174 aa7.32□□□□□ -1.24
COL6A4P1-201ENST00000446690 CT45A10P0DMU9 189 aa7.32□□□□□ -1.24
COL6A4P1-201ENST00000446690 C10orf99Q6UWK7 81 aa7.32□□□□□ -1.24
COL6A4P1-201ENST00000446690 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.32□□□□□ -1.24
COL6A4P1-201ENST00000446690 BAGE3Q86Y29 109 aa7.32□□□□□ -1.24
COL6A4P1-201ENST00000446690 DUX5Q96PT3 197 aa7.32□□□□□ -1.24
COL6A4P1-201ENST00000446690 SSBP4Q9BWG4 385 aaPredicted RBP7.32□□□□□ -1.24
COL6A4P1-201ENST00000446690 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.32□□□□□ -1.24
COL6A4P1-201ENST00000446690 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.32□□□□□ -1.24
COL6A4P1-201ENST00000446690 A0A0G2JLM5 398 aa7.32□□□□□ -1.24
COL6A4P1-201ENST00000446690 HOXA3O43365 443 aaPredicted RBP7.32□□□□□ -1.24
COL6A4P1-201ENST00000446690 IGLV1-40P01703 118 aa7.32□□□□□ -1.24
COL6A4P1-201ENST00000446690 IGHG4P01861 327 aa7.32□□□□□ -1.24
COL6A4P1-201ENST00000446690 HLA-DQA1P01909 254 aa7.32□□□□□ -1.24
COL6A4P1-201ENST00000446690 CRIP1P50238 77 aa7.32□□□□□ -1.24
COL6A4P1-201ENST00000446690 ERCC8Q13216 396 aa7.32□□□□□ -1.24
COL6A4P1-201ENST00000446690 COX19Q49B96 90 aa7.32□□□□□ -1.24
COL6A4P1-201ENST00000446690 TEX43Q6ZNM6 134 aa7.32□□□□□ -1.24
COL6A4P1-201ENST00000446690 TMEM190Q8WZ59 177 aa7.32□□□□□ -1.24
COL6A4P1-201ENST00000446690 TPPP3Q9BW30 176 aa7.32□□□□□ -1.24
COL6A4P1-201ENST00000446690 SELENOKQ9Y6D0 94 aa7.32□□□□□ -1.24
COL6A4P1-201ENST00000446690 TMSB15BA0A087X1C1 80 aa7.31□□□□□ -1.24
COL6A4P1-201ENST00000446690 SERTM2A0A1B0GWG4 89 aa7.31□□□□□ -1.24
COL6A4P1-201ENST00000446690 PRAC2D3DTV9 90 aa7.31□□□□□ -1.24
COL6A4P1-201ENST00000446690 ZNF253O75346 499 aa7.31□□□□□ -1.24
COL6A4P1-201ENST00000446690 RPL11P62913 178 aaKnown RBP7.31□□□□□ -1.24
COL6A4P1-201ENST00000446690 SLAQ13239 276 aa7.31□□□□□ -1.24
COL6A4P1-201ENST00000446690 TDRG1Q3Y452 100 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms