RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 PMS2P11Q13670 270 aa12.94□□□□□ -0.34
SGCE-206ENST00000445866 HAGHQ16775 308 aa12.94□□□□□ -0.34
SGCE-206ENST00000445866 Q8N1Y9 231 aa12.94□□□□□ -0.34
SGCE-206ENST00000445866 RXFP4Q8TDU9 374 aa12.94□□□□□ -0.34
SGCE-206ENST00000445866 FAM110AQ9BQ89 295 aa12.94□□□□□ -0.34
SGCE-206ENST00000445866 MANBALQ9NQG1 85 aa12.94□□□□□ -0.34
SGCE-206ENST00000445866 C19orf73Q9NVV2 129 aa12.94□□□□□ -0.34
SGCE-206ENST00000445866 GGTLC3B5MD39 225 aa12.93□□□□□ -0.34
SGCE-206ENST00000445866 ZNF124Q15973 351 aa12.93□□□□□ -0.34
SGCE-206ENST00000445866 KPRPQ5T749 579 aaPredicted RBP12.93□□□□□ -0.34
SGCE-206ENST00000445866 DEFB125Q8N687 156 aa12.93□□□□□ -0.34
SGCE-206ENST00000445866 KNCNA6PVL3 124 aa12.93□□□□□ -0.34
SGCE-206ENST00000445866 PRAC2D3DTV9 90 aa12.93□□□□□ -0.34
SGCE-206ENST00000445866 PRB2P02812 416 aaPredicted RBP12.93□□□□□ -0.34
SGCE-206ENST00000445866 CLLU1Q5K131 121 aa12.93□□□□□ -0.34
SGCE-206ENST00000445866 EBLN2Q6P2I7 272 aa12.93□□□□□ -0.34
SGCE-206ENST00000445866 MRPL53Q96EL3 112 aaKnown RBP12.93□□□□□ -0.34
SGCE-206ENST00000445866 WFDC10AQ9H1F0 79 aa12.93□□□□□ -0.34
SGCE-206ENST00000445866 F6UB75 175 aa12.92□□□□□ -0.34
SGCE-206ENST00000445866 ACTL10Q5JWF8 245 aa12.92□□□□□ -0.34
SGCE-206ENST00000445866 EPDR1Q9UM22 224 aa12.92□□□□□ -0.34
SGCE-206ENST00000445866 RPH3ALQ9UNE2 315 aa12.92□□□□□ -0.34
SGCE-206ENST00000445866 ARL2-SNX15V9GYD0 113 aa12.92□□□□□ -0.34
SGCE-206ENST00000445866 RBFOX3A6NFN3 312 aa12.91□□□□□ -0.34
SGCE-206ENST00000445866 C11orf94C9JXX5 98 aa12.91□□□□□ -0.34
SGCE-206ENST00000445866 RGS13O14921 159 aa12.91□□□□□ -0.34
SGCE-206ENST00000445866 ZNF705DP0CH99 300 aaPredicted RBP12.91□□□□□ -0.34
SGCE-206ENST00000445866 ZNF705BP0CI00 300 aaPredicted RBP12.91□□□□□ -0.34
SGCE-206ENST00000445866 ATP5G3P48201 142 aa12.91□□□□□ -0.34
SGCE-206ENST00000445866 C5orf17Q8NAS9 161 aa12.91□□□□□ -0.34
SGCE-206ENST00000445866 RARRES2Q99969 163 aa12.91□□□□□ -0.34
SGCE-206ENST00000445866 TUBA4BQ9H853 241 aa12.91□□□□□ -0.34
SGCE-206ENST00000445866 BCL2P10415 239 aa12.9□□□□□ -0.34
SGCE-206ENST00000445866 TAGLN2P37802 199 aaKnown RBP12.9□□□□□ -0.34
SGCE-206ENST00000445866 GNG5P63218 68 aa12.9□□□□□ -0.34
SGCE-206ENST00000445866 FOXI2Q6ZQN5 318 aa12.9□□□□□ -0.34
SGCE-206ENST00000445866 CCDC28AQ8IWP9 274 aa12.9□□□□□ -0.34
SGCE-206ENST00000445866 OR10J6PQ8NGY7 276 aa12.9□□□□□ -0.34
SGCE-206ENST00000445866 EIF5A2Q9GZV4 153 aaKnown RBP12.9□□□□□ -0.34
SGCE-206ENST00000445866 VAX2Q9UIW0 290 aa12.9□□□□□ -0.34
SGCE-206ENST00000445866 DIRC3C9JPN6 131 aa12.89□□□□□ -0.35
SGCE-206ENST00000445866 GDF5OSQ5U4N7 250 aa12.89□□□□□ -0.35
SGCE-206ENST00000445866 STHQ8IWL8 128 aa12.89□□□□□ -0.35
SGCE-206ENST00000445866 OR8A1Q8NGG7 326 aa12.89□□□□□ -0.35
SGCE-206ENST00000445866 SAV1Q9H4B6 383 aaPredicted RBP12.89□□□□□ -0.35
SGCE-206ENST00000445866 A0A0J9YX75 114 aa12.89□□□□□ -0.35
SGCE-206ENST00000445866 HIST1H1AQ02539 215 aaPredicted RBP12.89□□□□□ -0.35
SGCE-206ENST00000445866 GOLT1AQ6ZVE7 132 aa12.89□□□□□ -0.35
SGCE-206ENST00000445866 ARL6IP6Q8N6S5 226 aa12.89□□□□□ -0.35
SGCE-206ENST00000445866 OR4B1Q8NGF8 309 aa12.89□□□□□ -0.35
SGCE-206ENST00000445866 CITED4Q96RK1 184 aa12.89□□□□□ -0.35
SGCE-206ENST00000445866 TXNDC17Q9BRA2 123 aa12.89□□□□□ -0.35
SGCE-206ENST00000445866 NOTCH1P46531 2555 aa12.89□□□□□ -0.35
SGCE-206ENST00000445866 IGKV2-40A0A087WW87 121 aaPredicted RBP12.88□□□□□ -0.35
SGCE-206ENST00000445866 LOC102723971A0A1B0GUV8 181 aa12.88□□□□□ -0.35
SGCE-206ENST00000445866 F6UZH7 168 aa12.88□□□□□ -0.35
SGCE-206ENST00000445866 H3BMM0 161 aa12.88□□□□□ -0.35
SGCE-206ENST00000445866 IGKV2D-40P01614 121 aaPredicted RBP12.88□□□□□ -0.35
SGCE-206ENST00000445866 IGKV3-20P01619 116 aa12.88□□□□□ -0.35
SGCE-206ENST00000445866 TCRAP04437 139 aa12.88□□□□□ -0.35
SGCE-206ENST00000445866 ERCC8Q13216 396 aa12.88□□□□□ -0.35
SGCE-206ENST00000445866 FAM210AQ96ND0 272 aa12.88□□□□□ -0.35
SGCE-206ENST00000445866 SRD5A3Q9H8P0 318 aa12.88□□□□□ -0.35
SGCE-206ENST00000445866 AURKAIP1Q9NWT8 199 aaPredicted RBP12.88□□□□□ -0.35
SGCE-206ENST00000445866 NBEAL1Q6ZS30 2694 aa12.87□□□□□ -0.35
SGCE-206ENST00000445866 DUSP14O95147 198 aaKnown RBP12.87□□□□□ -0.35
SGCE-206ENST00000445866 MEF2BQ02080 365 aaPredicted RBP12.87□□□□□ -0.35
SGCE-206ENST00000445866 TOR2AQ5JU69 321 aa12.87□□□□□ -0.35
SGCE-206ENST00000445866 HIST1H2BAQ96A08 127 aa12.87□□□□□ -0.35
SGCE-206ENST00000445866 VGLL1Q99990 258 aa12.87□□□□□ -0.35
SGCE-206ENST00000445866 K7EQM0 130 aa12.86□□□□□ -0.35
SGCE-206ENST00000445866 HLA-DRB4P13762 266 aa12.86□□□□□ -0.35
SGCE-206ENST00000445866 CNN1P51911 297 aaKnown RBP12.86□□□□□ -0.35
SGCE-206ENST00000445866 ZNF506Q5JVG8 444 aa12.86□□□□□ -0.35
SGCE-206ENST00000445866 TCEAL7Q9BRU2 100 aa12.86□□□□□ -0.35
SGCE-206ENST00000445866 ATG101Q9BSB4 218 aa12.86□□□□□ -0.35
SGCE-206ENST00000445866 AGPAT4-IT1Q9H0P7 198 aa12.86□□□□□ -0.35
SGCE-206ENST00000445866 HLA-DRB4X5D2U9 266 aa12.86□□□□□ -0.35
SGCE-206ENST00000445866 PEX7O00628 323 aa12.86□□□□□ -0.35
SGCE-206ENST00000445866 PDE6DO43924 150 aa12.86□□□□□ -0.35
SGCE-206ENST00000445866 IGHV4-30-4P0DP06 118 aa12.86□□□□□ -0.35
SGCE-206ENST00000445866 RPL35AP18077 110 aaKnown RBP12.86□□□□□ -0.35
SGCE-206ENST00000445866 DEFB121Q5J5C9 76 aa12.86□□□□□ -0.35
SGCE-206ENST00000445866 LINC00477Q96M19 166 aa12.86□□□□□ -0.35
SGCE-206ENST00000445866 LINC00479Q96M42 142 aa12.86□□□□□ -0.35
SGCE-206ENST00000445866 PPP1R14DQ9NXH3 145 aa12.86□□□□□ -0.35
SGCE-206ENST00000445866 SORL1Q92673 2214 aa12.85□□□□□ -0.35
SGCE-206ENST00000445866 TMEM78Q5T7P6 136 aa12.85□□□□□ -0.35
SGCE-206ENST00000445866 CYB561D1Q8N8Q1 229 aa12.85□□□□□ -0.35
SGCE-206ENST00000445866 SGK494Q96LW2 274 aa12.85□□□□□ -0.35
SGCE-206ENST00000445866 TRAV34A0A0B4J273 112 aa12.84□□□□□ -0.35
SGCE-206ENST00000445866 SERTM2A0A1B0GWG4 89 aa12.84□□□□□ -0.35
SGCE-206ENST00000445866 SCO2A0A1W2PP80 73 aa12.84□□□□□ -0.35
SGCE-206ENST00000445866 RBAKDNA6NC62 111 aa12.84□□□□□ -0.35
SGCE-206ENST00000445866 C9orf47Q6ZRZ4 202 aa12.84□□□□□ -0.35
SGCE-206ENST00000445866 MED9Q9NWA0 146 aa12.84□□□□□ -0.35
SGCE-206ENST00000445866 TRAV8-1A0A0A6YYK1 113 aa12.83□□□□□ -0.35
SGCE-206ENST00000445866 NPIPB6E9PJ23 425 aa12.83□□□□□ -0.35
SGCE-206ENST00000445866 K7EIL1 84 aa12.83□□□□□ -0.35
SGCE-206ENST00000445866 PEA15Q15121 130 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 303.5 ms