RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 X6R8D5 127 aa17.37■□□□□ 0.37
C9orf3-207ENST00000445181 IGHV4-28A0A0C4DH34 117 aa17.36■□□□□ 0.37
C9orf3-207ENST00000445181 M0R2Z0 102 aa17.36■□□□□ 0.37
C9orf3-207ENST00000445181 NDUFB4O95168 129 aa17.36■□□□□ 0.37
C9orf3-207ENST00000445181 UBE2L3P68036 154 aaKnown RBP17.36■□□□□ 0.37
C9orf3-207ENST00000445181 SPINK13Q1W4C9 94 aa17.36■□□□□ 0.37
C9orf3-207ENST00000445181 FAM122CQ6P4D5 195 aa17.36■□□□□ 0.37
C9orf3-207ENST00000445181 OR2G3Q8NGZ4 309 aa17.36■□□□□ 0.37
C9orf3-207ENST00000445181 FXYD5Q96DB9 178 aa17.36■□□□□ 0.37
C9orf3-207ENST00000445181 GOLT1BQ9Y3E0 138 aa17.36■□□□□ 0.37
C9orf3-207ENST00000445181 PRAC2D3DTV9 90 aa17.35■□□□□ 0.37
C9orf3-207ENST00000445181 BOLA2-SMG1P6H3BVE0 249 aa17.35■□□□□ 0.37
C9orf3-207ENST00000445181 AMBPP02760 352 aa17.35■□□□□ 0.37
C9orf3-207ENST00000445181 Q8NAQ8 132 aa17.35■□□□□ 0.37
C9orf3-207ENST00000445181 SH3BGRL3Q9H299 93 aa17.35■□□□□ 0.37
C9orf3-207ENST00000445181 PRELID1Q9Y255 219 aa17.35■□□□□ 0.37
C9orf3-207ENST00000445181 STARD9Q9P2P6 4700 aa17.34■□□□□ 0.37
C9orf3-207ENST00000445181 TAAR5O14804 337 aa17.34■□□□□ 0.37
C9orf3-207ENST00000445181 EIF3GO75821 320 aaKnown RBP eCLIP17.34■□□□□ 0.37
C9orf3-207ENST00000445181 EXOC3-AS1Q8N2X6 119 aa17.34■□□□□ 0.37
C9orf3-207ENST00000445181 GNPNAT1Q96EK6 184 aaPredicted RBP17.34■□□□□ 0.37
C9orf3-207ENST00000445181 MRPL53Q96EL3 112 aaKnown RBP17.34■□□□□ 0.37
C9orf3-207ENST00000445181 M0R3E3 92 aa17.33■□□□□ 0.36
C9orf3-207ENST00000445181 MBP02144 154 aa17.33■□□□□ 0.36
C9orf3-207ENST00000445181 SERF2P84101 59 aa17.33■□□□□ 0.36
C9orf3-207ENST00000445181 PMS2P11Q13670 270 aa17.33■□□□□ 0.36
C9orf3-207ENST00000445181 ZNF705AQ6ZN79 300 aaPredicted RBP17.33■□□□□ 0.36
C9orf3-207ENST00000445181 ZNF503Q96F45 646 aa17.33■□□□□ 0.36
C9orf3-207ENST00000445181 IGF2BP2-AS1Q96M15 143 aa17.33■□□□□ 0.36
C9orf3-207ENST00000445181 TMEM208Q9BTX3 173 aa17.33■□□□□ 0.36
C9orf3-207ENST00000445181 CXorf65A6NEN9 183 aa17.32■□□□□ 0.36
C9orf3-207ENST00000445181 JTBO76095 146 aa17.32■□□□□ 0.36
C9orf3-207ENST00000445181 INSP01308 110 aa17.32■□□□□ 0.36
C9orf3-207ENST00000445181 ICAM4Q14773 271 aa17.32■□□□□ 0.36
C9orf3-207ENST00000445181 TRAV12-2A0A075B6T6 113 aa17.31■□□□□ 0.36
C9orf3-207ENST00000445181 HMGB3O15347 200 aaKnown RBP17.31■□□□□ 0.36
C9orf3-207ENST00000445181 RBMY1A1P0DJD3 496 aaKnown RBP17.31■□□□□ 0.36
C9orf3-207ENST00000445181 RBMY1CP0DJD4 496 aa17.31■□□□□ 0.36
C9orf3-207ENST00000445181 CDC34P49427 236 aaPredicted RBP17.31■□□□□ 0.36
C9orf3-207ENST00000445181 RBMY1FQ15415 496 aaKnown RBP17.31■□□□□ 0.36
C9orf3-207ENST00000445181 BAP18Q8IXM2 172 aa17.31■□□□□ 0.36
C9orf3-207ENST00000445181 C11orf45Q8TAV5 145 aa17.31■□□□□ 0.36
C9orf3-207ENST00000445181 PHYHIPLQ96FC7 376 aa17.31■□□□□ 0.36
C9orf3-207ENST00000445181 SACSQ9NZJ4 4579 aa17.31■□□□□ 0.36
C9orf3-207ENST00000445181 RANP62826 216 aaKnown RBP17.3■□□□□ 0.36
C9orf3-207ENST00000445181 Q6ZNX1 250 aa17.3■□□□□ 0.36
C9orf3-207ENST00000445181 PQLC2Q6ZP29 291 aa17.3■□□□□ 0.36
C9orf3-207ENST00000445181 NEU1Q99519 415 aa17.3■□□□□ 0.36
C9orf3-207ENST00000445181 SMIM9A6NGZ8 99 aa17.29■□□□□ 0.36
C9orf3-207ENST00000445181 HMSDA8MTL9 139 aa17.29■□□□□ 0.36
C9orf3-207ENST00000445181 CDKN1BP46527 198 aa17.29■□□□□ 0.36
C9orf3-207ENST00000445181 ZNF345Q14585 488 aa17.29■□□□□ 0.36
C9orf3-207ENST00000445181 C1orf158Q8N1D5 194 aa17.29■□□□□ 0.36
C9orf3-207ENST00000445181 RPP25LQ8N5L8 163 aaKnown RBP17.29■□□□□ 0.36
C9orf3-207ENST00000445181 OR11H4Q8NGC9 324 aa17.29■□□□□ 0.36
C9orf3-207ENST00000445181 ARPC5LQ9BPX5 153 aa17.29■□□□□ 0.36
C9orf3-207ENST00000445181 NPIPB6E9PJ23 425 aa17.28■□□□□ 0.36
C9orf3-207ENST00000445181 CRXO43186 299 aaPredicted RBP17.28■□□□□ 0.36
C9orf3-207ENST00000445181 HBE1P02100 147 aa17.28■□□□□ 0.36
C9orf3-207ENST00000445181 TSPOP30536 169 aa17.28■□□□□ 0.36
C9orf3-207ENST00000445181 KCNRGQ8N5I3 272 aa17.28■□□□□ 0.36
C9orf3-207ENST00000445181 CSN1S1P47710 185 aa17.27■□□□□ 0.36
C9orf3-207ENST00000445181 NANOS2P60321 138 aaKnown RBP17.27■□□□□ 0.36
C9orf3-207ENST00000445181 LYPD1Q8N2G4 141 aa17.27■□□□□ 0.36
C9orf3-207ENST00000445181 RAB24Q969Q5 203 aa17.27■□□□□ 0.36
C9orf3-207ENST00000445181 ACTR3CQ9C0K3 210 aaPredicted RBP17.27■□□□□ 0.36
C9orf3-207ENST00000445181 Q9H3A6 140 aa17.27■□□□□ 0.36
C9orf3-207ENST00000445181 CYTL1Q9NRR1 136 aa17.27■□□□□ 0.36
C9orf3-207ENST00000445181 RYR2Q92736 4967 aa17.27■□□□□ 0.35
C9orf3-207ENST00000445181 LYSTQ99698 3801 aa17.26■□□□□ 0.35
C9orf3-207ENST00000445181 A0A0D9SG52 128 aa17.26■□□□□ 0.35
C9orf3-207ENST00000445181 ARL14EPLP0DKL9 152 aa17.26■□□□□ 0.35
C9orf3-207ENST00000445181 LEPP41159 167 aa17.26■□□□□ 0.35
C9orf3-207ENST00000445181 EMP1P54849 157 aa17.26■□□□□ 0.35
C9orf3-207ENST00000445181 ERCC8Q13216 396 aa17.26■□□□□ 0.35
C9orf3-207ENST00000445181 hCG_2014768A0A024R1R8 64 aa17.25■□□□□ 0.35
C9orf3-207ENST00000445181 IGKV2-40A0A087WW87 121 aaPredicted RBP17.25■□□□□ 0.35
C9orf3-207ENST00000445181 IGKV2D-40P01614 121 aaPredicted RBP17.25■□□□□ 0.35
C9orf3-207ENST00000445181 CT45A10P0DMU9 189 aa17.25■□□□□ 0.35
C9orf3-207ENST00000445181 RRN3P1Q2M238 152 aa17.25■□□□□ 0.35
C9orf3-207ENST00000445181 AKR1C8PQ5T2L2 129 aa17.25■□□□□ 0.35
C9orf3-207ENST00000445181 ST6GAL2Q96JF0 529 aa17.25■□□□□ 0.35
C9orf3-207ENST00000445181 KANTRA0A1W2PQU2 76 aa17.24■□□□□ 0.35
C9orf3-207ENST00000445181 TMEM189A5PLL7 270 aa17.24■□□□□ 0.35
C9orf3-207ENST00000445181 J3KRW8 73 aa17.24■□□□□ 0.35
C9orf3-207ENST00000445181 STAG3L2P0CL84 134 aa17.24■□□□□ 0.35
C9orf3-207ENST00000445181 STAG3L3P0CL85 134 aa17.24■□□□□ 0.35
C9orf3-207ENST00000445181 HYLS1Q96M11 299 aa17.24■□□□□ 0.35
C9orf3-207ENST00000445181 ODF3Q96PU9 254 aa17.24■□□□□ 0.35
C9orf3-207ENST00000445181 LINC01587Q99440 93 aa17.24■□□□□ 0.35
C9orf3-207ENST00000445181 LOC102723971A0A1B0GUV8 181 aa17.23■□□□□ 0.35
C9orf3-207ENST00000445181 NUPR2A6NF83 97 aa17.23■□□□□ 0.35
C9orf3-207ENST00000445181 FAM74A1Q5RGS3 127 aa17.23■□□□□ 0.35
C9orf3-207ENST00000445181 TMEM78Q5T7P6 136 aa17.23■□□□□ 0.35
C9orf3-207ENST00000445181 TMEM256Q8N2U0 113 aa17.23■□□□□ 0.35
C9orf3-207ENST00000445181 LINC00477Q96M19 166 aa17.23■□□□□ 0.35
C9orf3-207ENST00000445181 BCL2L11O43521 198 aa17.22■□□□□ 0.35
C9orf3-207ENST00000445181 PFDN1O60925 122 aa17.22■□□□□ 0.35
C9orf3-207ENST00000445181 IQCF2Q8IXL9 164 aa17.22■□□□□ 0.35
C9orf3-207ENST00000445181 CMTM2Q8TAZ6 248 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms