RNA–Protein interactions for RNA: ENST00000444609.1

HDAC8-215, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-215ENST00000444609 hCG_2014768A0A024R1R8 64 aa6.3□□□□□ -1.4
HDAC8-215ENST00000444609 LINC00854A0A1B0GVQ3 168 aa6.3□□□□□ -1.4
HDAC8-215ENST00000444609 CT45A10P0DMU9 189 aa6.3□□□□□ -1.4
HDAC8-215ENST00000444609 LEPP41159 167 aa6.3□□□□□ -1.4
HDAC8-215ENST00000444609 FXYD6Q9H0Q3 95 aa6.3□□□□□ -1.4
HDAC8-215ENST00000444609 EHFQ9NZC4 300 aa6.3□□□□□ -1.4
HDAC8-215ENST00000444609 PLAC8Q9NZF1 115 aa6.3□□□□□ -1.4
HDAC8-215ENST00000444609 PSORS1C2Q9UIG4 136 aa6.3□□□□□ -1.4
HDAC8-215ENST00000444609 TP53TG3Q9ULZ0 132 aa6.3□□□□□ -1.4
HDAC8-215ENST00000444609 A0A1B0GVG6 124 aa6.29□□□□□ -1.4
HDAC8-215ENST00000444609 FAM25EA8MYX2 175 aa6.29□□□□□ -1.4
HDAC8-215ENST00000444609 PRAC2D3DTV9 90 aa6.29□□□□□ -1.4
HDAC8-215ENST00000444609 SCGNO76038 276 aa6.29□□□□□ -1.4
HDAC8-215ENST00000444609 S100GP29377 79 aa6.29□□□□□ -1.4
HDAC8-215ENST00000444609 RFX2P48378 723 aa6.29□□□□□ -1.4
HDAC8-215ENST00000444609 AKR1C2P52895 323 aa6.29□□□□□ -1.4
HDAC8-215ENST00000444609 SPCS2Q15005 226 aa6.29□□□□□ -1.4
HDAC8-215ENST00000444609 AARDQ4LEZ3 155 aa6.29□□□□□ -1.4
HDAC8-215ENST00000444609 Q6ZNX1 250 aa6.29□□□□□ -1.4
HDAC8-215ENST00000444609 AHSA2Q719I0 299 aa6.29□□□□□ -1.4
HDAC8-215ENST00000444609 FAM219AQ8IW50 185 aa6.29□□□□□ -1.4
HDAC8-215ENST00000444609 ZNF664Q8N3J9 261 aa6.29□□□□□ -1.4
HDAC8-215ENST00000444609 GTSF1Q8WW33 167 aa6.29□□□□□ -1.4
HDAC8-215ENST00000444609 ODF3Q96PU9 254 aa6.29□□□□□ -1.4
HDAC8-215ENST00000444609 PDCD5O14737 125 aa6.28□□□□□ -1.4
HDAC8-215ENST00000444609 CFDP00746 253 aaPredicted RBP6.28□□□□□ -1.4
HDAC8-215ENST00000444609 SLC25A5P05141 298 aaKnown RBP6.28□□□□□ -1.4
HDAC8-215ENST00000444609 PRSS1P07477 247 aa6.28□□□□□ -1.4
HDAC8-215ENST00000444609 RPL19P84098 196 aaKnown RBP6.28□□□□□ -1.4
HDAC8-215ENST00000444609 MEF2DQ14814 521 aa6.28□□□□□ -1.4
HDAC8-215ENST00000444609 SPHARQ15513 63 aa6.28□□□□□ -1.4
HDAC8-215ENST00000444609 VWC2Q2TAL6 325 aa6.28□□□□□ -1.4
HDAC8-215ENST00000444609 NMSQ5H8A3 153 aa6.28□□□□□ -1.4
HDAC8-215ENST00000444609 ATRAIDQ6UW56 229 aa6.28□□□□□ -1.4
HDAC8-215ENST00000444609 OR10P1Q8NGE3 313 aa6.28□□□□□ -1.4
HDAC8-215ENST00000444609 LRRC20Q8TCA0 184 aa6.28□□□□□ -1.4
HDAC8-215ENST00000444609 DYNC2LI1Q8TCX1 351 aa6.28□□□□□ -1.4
HDAC8-215ENST00000444609 C2orf50Q96LR7 162 aa6.28□□□□□ -1.4
HDAC8-215ENST00000444609 TRGV9Q99603 122 aa6.28□□□□□ -1.4
HDAC8-215ENST00000444609 A0A087X0K7 114 aa6.27□□□□□ -1.41
HDAC8-215ENST00000444609 A0A0G2JRQ6 117 aa6.27□□□□□ -1.41
HDAC8-215ENST00000444609 C7orf71A4D174 169 aa6.27□□□□□ -1.41
HDAC8-215ENST00000444609 CRYM-AS1A6NIL9 109 aa6.27□□□□□ -1.41
HDAC8-215ENST00000444609 GABARAPH6UMI1 98 aa6.27□□□□□ -1.41
HDAC8-215ENST00000444609 PFDN1O60925 122 aa6.27□□□□□ -1.41
HDAC8-215ENST00000444609 CLEC2LP0C7M8 214 aa6.27□□□□□ -1.41
HDAC8-215ENST00000444609 RPL7P18124 248 aaKnown RBP6.27□□□□□ -1.41
HDAC8-215ENST00000444609 FABP5Q01469 135 aa6.27□□□□□ -1.41
HDAC8-215ENST00000444609 TRAM1Q15629 374 aa6.27□□□□□ -1.41
HDAC8-215ENST00000444609 TRIM16LQ309B1 348 aa6.27□□□□□ -1.41
HDAC8-215ENST00000444609 GGNBP1Q5YKI7 109 aa6.27□□□□□ -1.41
HDAC8-215ENST00000444609 LPCAT3Q6P1A2 487 aa6.27□□□□□ -1.41
HDAC8-215ENST00000444609 SPACA4Q8TDM5 124 aa6.27□□□□□ -1.41
HDAC8-215ENST00000444609 RASL10AQ92737 203 aa6.27□□□□□ -1.41
HDAC8-215ENST00000444609 UFD1Q92890 307 aa6.27□□□□□ -1.41
HDAC8-215ENST00000444609 MND1Q9BWT6 205 aa6.27□□□□□ -1.41
HDAC8-215ENST00000444609 GTSF1LQ9H1H1 148 aa6.27□□□□□ -1.41
HDAC8-215ENST00000444609 TMA7Q9Y2S6 64 aaKnown RBP6.27□□□□□ -1.41
HDAC8-215ENST00000444609 LSM2Q9Y333 95 aaKnown RBP6.27□□□□□ -1.41
HDAC8-215ENST00000444609 IGHV1OR15-1A0A075B7D0 117 aa6.26□□□□□ -1.41
HDAC8-215ENST00000444609 USP17L23D6RBM5 183 aa6.26□□□□□ -1.41
HDAC8-215ENST00000444609 CHTF8P0CG12 524 aa6.26□□□□□ -1.41
HDAC8-215ENST00000444609 ORM2P19652 201 aa6.26□□□□□ -1.41
HDAC8-215ENST00000444609 S100A7P31151 101 aa6.26□□□□□ -1.41
HDAC8-215ENST00000444609 GPX4P36969 197 aaPredicted RBP6.26□□□□□ -1.41
HDAC8-215ENST00000444609 RGS21Q2M5E4 152 aa6.26□□□□□ -1.41
HDAC8-215ENST00000444609 TMEM147Q9BVK8 224 aa6.26□□□□□ -1.41
HDAC8-215ENST00000444609 CCDC59Q9P031 241 aaKnown RBP6.26□□□□□ -1.41
HDAC8-215ENST00000444609 TRAV18A0A075B6X5 111 aa6.25□□□□□ -1.41
HDAC8-215ENST00000444609 TRAV1-2A0A0B4J238 106 aa6.25□□□□□ -1.41
HDAC8-215ENST00000444609 FABP12A6NFH5 140 aa6.25□□□□□ -1.41
HDAC8-215ENST00000444609 MPDU1O75352 247 aa6.25□□□□□ -1.41
HDAC8-215ENST00000444609 PMP2P02689 132 aa6.25□□□□□ -1.41
HDAC8-215ENST00000444609 VBP1P61758 197 aa6.25□□□□□ -1.41
HDAC8-215ENST00000444609 BPIFCQ8NFQ6 507 aa6.25□□□□□ -1.41
HDAC8-215ENST00000444609 SLIRPQ9GZT3 109 aaKnown RBP6.25□□□□□ -1.41
HDAC8-215ENST00000444609 TMEM222Q9H0R3 208 aa6.25□□□□□ -1.41
HDAC8-215ENST00000444609 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.25□□□□□ -1.41
HDAC8-215ENST00000444609 RABL2AQ9UBK7 228 aaPredicted RBP6.25□□□□□ -1.41
HDAC8-215ENST00000444609 TRAV4A0A0B4J268 109 aa6.24□□□□□ -1.41
HDAC8-215ENST00000444609 CEBPZOSA8MTT3 80 aa6.24□□□□□ -1.41
HDAC8-215ENST00000444609 KLLNB2CW77 178 aa6.24□□□□□ -1.41
HDAC8-215ENST00000444609 H3BRN7 92 aa6.24□□□□□ -1.41
HDAC8-215ENST00000444609 GATA1P15976 413 aaPredicted RBP6.24□□□□□ -1.41
HDAC8-215ENST00000444609 VAMP1P23763 118 aa6.24□□□□□ -1.41
HDAC8-215ENST00000444609 BTN1A1Q13410 526 aa6.24□□□□□ -1.41
HDAC8-215ENST00000444609 OR4C5Q8NGB2 326 aa6.24□□□□□ -1.41
HDAC8-215ENST00000444609 Q8TAT8 98 aa6.24□□□□□ -1.41
HDAC8-215ENST00000444609 UBE2WQ96B02 151 aa6.24□□□□□ -1.41
HDAC8-215ENST00000444609 MGLLQ99685 303 aa6.24□□□□□ -1.41
HDAC8-215ENST00000444609 SHANK2-AS3Q9BTD1 123 aa6.24□□□□□ -1.41
HDAC8-215ENST00000444609 ZNF331Q9NQX6 463 aaPredicted RBP6.24□□□□□ -1.41
HDAC8-215ENST00000444609 SYNE2Q8WXH0 6885 aaKnown RBP6.23□□□□□ -1.41
HDAC8-215ENST00000444609 MEIS3P1A6NDR6 274 aa6.23□□□□□ -1.41
HDAC8-215ENST00000444609 OR10J4P0C629 311 aa6.23□□□□□ -1.41
HDAC8-215ENST00000444609 SEC11BP0C7V7 166 aa6.23□□□□□ -1.41
HDAC8-215ENST00000444609 RAB3BP20337 219 aa6.23□□□□□ -1.41
HDAC8-215ENST00000444609 S100A5P33763 92 aa6.23□□□□□ -1.41
HDAC8-215ENST00000444609 NCS1P62166 190 aa6.23□□□□□ -1.41
HDAC8-215ENST00000444609 LSM3P62310 102 aaKnown RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms