RNA–Protein interactions for RNA: ENST00000444118.5

CCDC197-202, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,937 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-202ENST00000444118 PSG3Q16557 428 aa13.33□□□□□ -0.28
CCDC197-202ENST00000444118 WDR73Q6P4I2 378 aa13.33□□□□□ -0.28
CCDC197-202ENST00000444118 SMAD5-AS1Q9Y6J3 95 aa13.33□□□□□ -0.28
CCDC197-202ENST00000444118 A0A087X0K7 114 aa13.32□□□□□ -0.28
CCDC197-202ENST00000444118 NPIPB6E9PJ23 425 aa13.32□□□□□ -0.28
CCDC197-202ENST00000444118 M0R3E3 92 aa13.32□□□□□ -0.28
CCDC197-202ENST00000444118 FRMD6-AS1P0C7T7 363 aa13.32□□□□□ -0.28
CCDC197-202ENST00000444118 IGHV4-31P0DP07 118 aa13.32□□□□□ -0.28
CCDC197-202ENST00000444118 IER3P46695 156 aa13.32□□□□□ -0.28
CCDC197-202ENST00000444118 BLCAPP62952 87 aa13.32□□□□□ -0.28
CCDC197-202ENST00000444118 Q5PR19 223 aa13.32□□□□□ -0.28
CCDC197-202ENST00000444118 RASL11AQ6T310 242 aa13.32□□□□□ -0.28
CCDC197-202ENST00000444118 PACRGQ96M98 296 aaPredicted RBP13.32□□□□□ -0.28
CCDC197-202ENST00000444118 TMEM208Q9BTX3 173 aa13.32□□□□□ -0.28
CCDC197-202ENST00000444118 MRPL18Q9H0U6 180 aaKnown RBP13.32□□□□□ -0.28
CCDC197-202ENST00000444118 GNB4Q9HAV0 340 aa13.32□□□□□ -0.28
CCDC197-202ENST00000444118 ZFP30Q9Y2G7 519 aa13.32□□□□□ -0.28
CCDC197-202ENST00000444118 SNURFLB1AK76 121 aa13.31□□□□□ -0.28
CCDC197-202ENST00000444118 DEFB112Q30KQ8 113 aa13.31□□□□□ -0.28
CCDC197-202ENST00000444118 MAPK1IP1LQ8NDC0 245 aa13.31□□□□□ -0.28
CCDC197-202ENST00000444118 WIPF2Q8TF74 440 aaPredicted RBP13.31□□□□□ -0.28
CCDC197-202ENST00000444118 RPP21Q9H633 154 aaKnown RBP13.31□□□□□ -0.28
CCDC197-202ENST00000444118 NAT8BQ9UHF3 227 aa13.31□□□□□ -0.28
CCDC197-202ENST00000444118 UNC79Q9P2D8 2635 aa13.31□□□□□ -0.28
CCDC197-202ENST00000444118 IGHV3OR16-8A0A075B7F1 116 aa13.31□□□□□ -0.28
CCDC197-202ENST00000444118 G0S2P27469 103 aa13.31□□□□□ -0.28
CCDC197-202ENST00000444118 CFHR3Q02985 330 aa13.31□□□□□ -0.28
CCDC197-202ENST00000444118 PDZD11Q5EBL8 140 aa13.31□□□□□ -0.28
CCDC197-202ENST00000444118 C1orf194Q5T5A4 169 aa13.31□□□□□ -0.28
CCDC197-202ENST00000444118 TMEM136Q6ZRR5 245 aa13.31□□□□□ -0.28
CCDC197-202ENST00000444118 C9orf139Q6ZV77 190 aa13.31□□□□□ -0.28
CCDC197-202ENST00000444118 PRNTQ86SH4 94 aa13.31□□□□□ -0.28
CCDC197-202ENST00000444118 USMG5Q96IX5 58 aa13.31□□□□□ -0.28
CCDC197-202ENST00000444118 HIST1H2BLQ99880 126 aa13.31□□□□□ -0.28
CCDC197-202ENST00000444118 IGLV1-40P01703 118 aa13.3□□□□□ -0.28
CCDC197-202ENST00000444118 TPPP2P59282 170 aa13.3□□□□□ -0.28
CCDC197-202ENST00000444118 C16orf54Q6UWD8 224 aa13.3□□□□□ -0.28
CCDC197-202ENST00000444118 Q6ZS46 218 aa13.3□□□□□ -0.28
CCDC197-202ENST00000444118 NUP35Q8NFH5 326 aa13.3□□□□□ -0.28
CCDC197-202ENST00000444118 PSG8Q9UQ74 426 aa13.3□□□□□ -0.28
CCDC197-202ENST00000444118 U3KQE9 123 aa13.3□□□□□ -0.28
CCDC197-202ENST00000444118 MXRA5Q9NR99 2828 aa13.29□□□□□ -0.28
CCDC197-202ENST00000444118 ZNF785A8K8V0 405 aa13.29□□□□□ -0.28
CCDC197-202ENST00000444118 P01737 135 aa13.29□□□□□ -0.28
CCDC197-202ENST00000444118 RPLP1P05386 114 aaKnown RBP13.29□□□□□ -0.28
CCDC197-202ENST00000444118 SLC35B1P78383 322 aa13.29□□□□□ -0.28
CCDC197-202ENST00000444118 PRSS57Q6UWY2 283 aa13.29□□□□□ -0.28
CCDC197-202ENST00000444118 KRTAP1-3Q8IUG1 177 aa13.29□□□□□ -0.28
CCDC197-202ENST00000444118 CIARTQ8N365 385 aaPredicted RBP13.29□□□□□ -0.28
CCDC197-202ENST00000444118 ZNF331Q9NQX6 463 aaPredicted RBP13.29□□□□□ -0.28
CCDC197-202ENST00000444118 HIGD1CA8MV81 97 aa13.29□□□□□ -0.28
CCDC197-202ENST00000444118 IGHV4-59P01825 116 aa13.29□□□□□ -0.28
CCDC197-202ENST00000444118 HLA-DQA1P01909 254 aa13.29□□□□□ -0.28
CCDC197-202ENST00000444118 FABP4P15090 132 aa13.29□□□□□ -0.28
CCDC197-202ENST00000444118 CSN1S1P47710 185 aa13.29□□□□□ -0.28
CCDC197-202ENST00000444118 Q71RC1 249 aaPredicted RBP13.29□□□□□ -0.28
CCDC197-202ENST00000444118 ZNF664Q8N3J9 261 aa13.29□□□□□ -0.28
CCDC197-202ENST00000444118 OR4B1Q8NGF8 309 aa13.29□□□□□ -0.28
CCDC197-202ENST00000444118 METTL26Q96S19 204 aa13.29□□□□□ -0.28
CCDC197-202ENST00000444118 TEX15Q9BXT5 2789 aa13.29□□□□□ -0.28
CCDC197-202ENST00000444118 GFRA4Q9GZZ7 299 aa13.29□□□□□ -0.28
CCDC197-202ENST00000444118 SETXQ7Z333 2677 aaKnown RBP13.28□□□□□ -0.28
CCDC197-202ENST00000444118 FAM231BA6NCW3 169 aa13.28□□□□□ -0.28
CCDC197-202ENST00000444118 FBLL1A6NHQ2 334 aaKnown RBP13.28□□□□□ -0.28
CCDC197-202ENST00000444118 A8MWL6 223 aa13.28□□□□□ -0.28
CCDC197-202ENST00000444118 EREGO14944 169 aa13.28□□□□□ -0.28
CCDC197-202ENST00000444118 CIDEAO60543 219 aa13.28□□□□□ -0.28
CCDC197-202ENST00000444118 SPINK4O60575 86 aa13.28□□□□□ -0.28
CCDC197-202ENST00000444118 IGHG4P01861 327 aa13.28□□□□□ -0.28
CCDC197-202ENST00000444118 MRPL54Q6P161 138 aaKnown RBP13.28□□□□□ -0.28
CCDC197-202ENST00000444118 ATP5L2Q7Z4Y8 100 aa13.28□□□□□ -0.28
CCDC197-202ENST00000444118 ZC2HC1AQ96GY0 325 aa13.28□□□□□ -0.28
CCDC197-202ENST00000444118 GZMBP10144 247 aa13.27□□□□□ -0.28
CCDC197-202ENST00000444118 COX8CQ7Z4L0 72 aa13.27□□□□□ -0.28
CCDC197-202ENST00000444118 GBGT1Q8N5D6 347 aa13.27□□□□□ -0.28
CCDC197-202ENST00000444118 ITPR3Q14573 2671 aa13.27□□□□□ -0.29
CCDC197-202ENST00000444118 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.27□□□□□ -0.29
CCDC197-202ENST00000444118 AMBPP02760 352 aa13.27□□□□□ -0.29
CCDC197-202ENST00000444118 ARL3P36405 182 aa13.27□□□□□ -0.29
CCDC197-202ENST00000444118 DAZAP1Q96EP5 407 aaKnown RBP13.27□□□□□ -0.29
CCDC197-202ENST00000444118 SNHG12Q9BXW3 62 aa13.27□□□□□ -0.29
CCDC197-202ENST00000444118 A0A1B0GXF2 115 aa13.26□□□□□ -0.29
CCDC197-202ENST00000444118 HSBP1L1C9JCN9 74 aa13.26□□□□□ -0.29
CCDC197-202ENST00000444118 CHEK1O14757 476 aa13.26□□□□□ -0.29
CCDC197-202ENST00000444118 CDKN1BP46527 198 aa13.26□□□□□ -0.29
CCDC197-202ENST00000444118 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.26□□□□□ -0.29
CCDC197-202ENST00000444118 KLK15Q9H2R5 256 aa13.26□□□□□ -0.29
CCDC197-202ENST00000444118 NDUFA4O00483 81 aa13.25□□□□□ -0.29
CCDC197-202ENST00000444118 APOHP02749 345 aaPredicted RBP13.25□□□□□ -0.29
CCDC197-202ENST00000444118 GTSF1Q8WW33 167 aa13.25□□□□□ -0.29
CCDC197-202ENST00000444118 SLC50A1Q9BRV3 221 aa13.25□□□□□ -0.29
CCDC197-202ENST00000444118 TRBV12-3P01733 135 aa13.25□□□□□ -0.29
CCDC197-202ENST00000444118 Q96MF0 132 aa13.25□□□□□ -0.29
CCDC197-202ENST00000444118 A0A0G2JLM5 398 aa13.24□□□□□ -0.29
CCDC197-202ENST00000444118 PF4V1P10720 104 aa13.24□□□□□ -0.29
CCDC197-202ENST00000444118 CRISP2P16562 243 aa13.24□□□□□ -0.29
CCDC197-202ENST00000444118 VPREB3Q9UKI3 123 aa13.24□□□□□ -0.29
CCDC197-202ENST00000444118 TP53TG3Q9ULZ0 132 aa13.24□□□□□ -0.29
CCDC197-202ENST00000444118 IGKV2-40A0A087WW87 121 aaPredicted RBP13.23□□□□□ -0.29
CCDC197-202ENST00000444118 GRIFINA4D1Z8 144 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms