RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 TM4SF5O14894 197 aa4.02□□□□□ -1.77
HERC1-201ENST00000443617 H7C2G1 150 aa4.02□□□□□ -1.77
HERC1-201ENST00000443617 FOXI1Q12951 378 aa4.02□□□□□ -1.77
HERC1-201ENST00000443617 ANXA2RQ3ZCQ2 193 aa4.02□□□□□ -1.77
HERC1-201ENST00000443617 THAP8Q8NA92 274 aa4.02□□□□□ -1.77
HERC1-201ENST00000443617 TTTY12Q9BZ98 90 aa4.02□□□□□ -1.77
HERC1-201ENST00000443617 FAM90A27PA6NNH2 459 aa4.02□□□□□ -1.77
HERC1-201ENST00000443617 ASIPP42127 132 aa4.02□□□□□ -1.77
HERC1-201ENST00000443617 TRBV20-1A0A075B6N2 111 aa4.02□□□□□ -1.77
HERC1-201ENST00000443617 ZNF688P0C7X2 276 aa4.02□□□□□ -1.77
HERC1-201ENST00000443617 NDUFV3P56181 108 aaKnown RBP4.02□□□□□ -1.77
HERC1-201ENST00000443617 LOXL1Q08397 574 aaPredicted RBP4.02□□□□□ -1.77
HERC1-201ENST00000443617 ZFHX2Q9C0A1 2572 aaPredicted RBP4.02□□□□□ -1.77
HERC1-201ENST00000443617 ZFYVE26Q68DK2 2539 aa4.02□□□□□ -1.77
HERC1-201ENST00000443617 TMEM158Q8WZ71 300 aa4.02□□□□□ -1.77
HERC1-201ENST00000443617 ZNF785A8K8V0 405 aa4.02□□□□□ -1.77
HERC1-201ENST00000443617 ODF1Q14990 250 aa4.02□□□□□ -1.77
HERC1-201ENST00000443617 HES7Q9BYE0 225 aa4.02□□□□□ -1.77
HERC1-201ENST00000443617 TMEM133Q9H2Q1 129 aa4.02□□□□□ -1.77
HERC1-201ENST00000443617 C10orf55Q5SWW7 151 aa4.02□□□□□ -1.77
HERC1-201ENST00000443617 ZC2HC1BQ5TFG8 222 aa4.02□□□□□ -1.77
HERC1-201ENST00000443617 FAM106CPP0CH98 169 aa4.02□□□□□ -1.77
HERC1-201ENST00000443617 RPL7P18124 248 aaKnown RBP4.02□□□□□ -1.77
HERC1-201ENST00000443617 POU2AF1Q16633 256 aa4.02□□□□□ -1.77
HERC1-201ENST00000443617 FAM106AQ4KMX7 169 aa4.02□□□□□ -1.77
HERC1-201ENST00000443617 HIVEP3Q5T1R4 2406 aa4.02□□□□□ -1.77
HERC1-201ENST00000443617 Q0VFX4 171 aa4.01□□□□□ -1.77
HERC1-201ENST00000443617 GLMPQ8WWB7 406 aa4.01□□□□□ -1.77
HERC1-201ENST00000443617 TRAV2A0A0B4J234 112 aa4.01□□□□□ -1.77
HERC1-201ENST00000443617 VKORC1Q9BQB6 163 aa4.01□□□□□ -1.77
HERC1-201ENST00000443617 C20orf78Q9BR46 151 aa4.01□□□□□ -1.77
HERC1-201ENST00000443617 PROCRQ9UNN8 238 aa4.01□□□□□ -1.77
HERC1-201ENST00000443617 RPL13AP40429 203 aaKnown RBP4.01□□□□□ -1.77
HERC1-201ENST00000443617 MEOX1P50221 254 aa4.01□□□□□ -1.77
HERC1-201ENST00000443617 INSL3P51460 131 aa4.01□□□□□ -1.77
HERC1-201ENST00000443617 ASCL2Q99929 193 aa4.01□□□□□ -1.77
HERC1-201ENST00000443617 TRAV8-4A0A0B4J246 113 aa4.01□□□□□ -1.77
HERC1-201ENST00000443617 GATA3P23771 443 aa4.01□□□□□ -1.77
HERC1-201ENST00000443617 MLST8Q9BVC4 326 aa4.01□□□□□ -1.77
HERC1-201ENST00000443617 BEX4Q9NWD9 120 aaPredicted RBP4.01□□□□□ -1.77
HERC1-201ENST00000443617 TRAV40A0A0B4J280 105 aa4.01□□□□□ -1.77
HERC1-201ENST00000443617 TMEM95Q3KNT9 176 aa4.01□□□□□ -1.77
HERC1-201ENST00000443617 TNFRSF6BO95407 300 aa4.01□□□□□ -1.77
HERC1-201ENST00000443617 WT1-ASQ06250 92 aa4.01□□□□□ -1.77
HERC1-201ENST00000443617 TEN1Q86WV5 123 aa4.01□□□□□ -1.77
HERC1-201ENST00000443617 TMEM75Q8N9X5 138 aa4.01□□□□□ -1.77
HERC1-201ENST00000443617 IGLV2-11P01706 119 aa4.01□□□□□ -1.77
HERC1-201ENST00000443617 MYCNOSP40205 109 aa4.01□□□□□ -1.77
HERC1-201ENST00000443617 Q6ZS92 163 aa4.01□□□□□ -1.77
HERC1-201ENST00000443617 Q8N8P6 123 aa4.01□□□□□ -1.77
HERC1-201ENST00000443617 TTTY13Q9BZ97 58 aa4.01□□□□□ -1.77
HERC1-201ENST00000443617 PCNTO95613 3336 aa4.01□□□□□ -1.77
HERC1-201ENST00000443617 PRB4P10163 310 aaPredicted RBP4.01□□□□□ -1.77
HERC1-201ENST00000443617 RPL27AP46776 148 aaKnown RBP4.01□□□□□ -1.77
HERC1-201ENST00000443617 TRBV19A0A075B6N1 114 aa4.01□□□□□ -1.77
HERC1-201ENST00000443617 A0A087WX48 190 aa4□□□□□ -1.77
HERC1-201ENST00000443617 DDB2Q92466 427 aa4□□□□□ -1.77
HERC1-201ENST00000443617 NPYP01303 97 aa4□□□□□ -1.77
HERC1-201ENST00000443617 NGBQ9NPG2 151 aa4□□□□□ -1.77
HERC1-201ENST00000443617 HIF1ANQ9NWT6 349 aa4□□□□□ -1.77
HERC1-201ENST00000443617 M0R3E3 92 aa4□□□□□ -1.77
HERC1-201ENST00000443617 TNFAIP6P98066 277 aaPredicted RBP4□□□□□ -1.77
HERC1-201ENST00000443617 ZNF493Q6ZR52 646 aa4□□□□□ -1.77
HERC1-201ENST00000443617 MRPL35Q9NZE8 188 aaKnown RBP4□□□□□ -1.77
HERC1-201ENST00000443617 TRBV6-1A0A0K0K1D8 114 aa4□□□□□ -1.77
HERC1-201ENST00000443617 ZNF815PA8K554 130 aa4□□□□□ -1.77
HERC1-201ENST00000443617 PHLDA1Q8WV24 401 aaPredicted RBP4□□□□□ -1.77
HERC1-201ENST00000443617 CDIP1Q9H305 208 aa4□□□□□ -1.77
HERC1-201ENST00000443617 FAM201AQ5SY85 155 aa4□□□□□ -1.77
HERC1-201ENST00000443617 CECR9P0C854 216 aa4□□□□□ -1.77
HERC1-201ENST00000443617 ANKRD11Q6UB99 2663 aaPredicted RBP4□□□□□ -1.77
HERC1-201ENST00000443617 LYPD1Q8N2G4 141 aa4□□□□□ -1.77
HERC1-201ENST00000443617 HERV-K104P63124 156 aa4□□□□□ -1.77
HERC1-201ENST00000443617 C7orf69Q9H7B7 122 aa4□□□□□ -1.77
HERC1-201ENST00000443617 PRRC2AP48634 2157 aaKnown RBP4□□□□□ -1.77
HERC1-201ENST00000443617 GP9P14770 177 aa4□□□□□ -1.77
HERC1-201ENST00000443617 IGHV1-2P23083 117 aa4□□□□□ -1.77
HERC1-201ENST00000443617 CD40P25942 277 aa4□□□□□ -1.77
HERC1-201ENST00000443617 IGHV3-72A0A0B4J1Y9 119 aa4□□□□□ -1.77
HERC1-201ENST00000443617 KLK15Q9H2R5 256 aa4□□□□□ -1.77
HERC1-201ENST00000443617 IGKV2D-26A0A0A0MRZ7 120 aa3.99□□□□□ -1.77
HERC1-201ENST00000443617 FBXL15Q9H469 300 aa3.99□□□□□ -1.77
HERC1-201ENST00000443617 IGKV2-40A0A087WW87 121 aaPredicted RBP3.99□□□□□ -1.77
HERC1-201ENST00000443617 IGKV2D-40P01614 121 aaPredicted RBP3.99□□□□□ -1.77
HERC1-201ENST00000443617 RPUSD1Q9UJJ7 312 aaKnown RBP3.99□□□□□ -1.77
HERC1-201ENST00000443617 PROP1O75360 226 aa3.99□□□□□ -1.77
HERC1-201ENST00000443617 FAM159AQ6UWV7 190 aa3.99□□□□□ -1.77
HERC1-201ENST00000443617 C8orf49Q96NF6 230 aa3.99□□□□□ -1.77
HERC1-201ENST00000443617 SRRM5B3KS81 715 aa3.99□□□□□ -1.77
HERC1-201ENST00000443617 Q6ZT83 130 aa3.99□□□□□ -1.77
HERC1-201ENST00000443617 CITED1Q99966 193 aa3.99□□□□□ -1.77
HERC1-201ENST00000443617 WI2-2373I1.2A0A1W2PRP0 233 aa3.99□□□□□ -1.77
HERC1-201ENST00000443617 C10orf126Q8N4M7 172 aa3.99□□□□□ -1.77
HERC1-201ENST00000443617 SAP25Q8TEE9 199 aa3.99□□□□□ -1.77
HERC1-201ENST00000443617 ZNF256Q9Y2P7 627 aaPredicted RBP3.99□□□□□ -1.77
HERC1-201ENST00000443617 FABP5P3A8MUU1 101 aa3.99□□□□□ -1.77
HERC1-201ENST00000443617 CGB1A6NKQ9 187 aa3.99□□□□□ -1.77
HERC1-201ENST00000443617 RAX2Q96IS3 184 aa3.99□□□□□ -1.77
HERC1-201ENST00000443617 IGKV1D-37A0A075B6S9 117 aa3.99□□□□□ -1.77
HERC1-201ENST00000443617 TSPAN13O95857 204 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms