RNA–Protein interactions for RNA: ENST00000442677.3

CDH23-207, Transcript of cadherin related 23, humanhuman

TSL 5

Gene CDH23, Length 7,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-207ENST00000442677 HLA-DRB4P13762 266 aa12.7□□□□□ -0.38
CDH23-207ENST00000442677 HLA-DRB4X5D2U9 266 aa12.7□□□□□ -0.38
CDH23-207ENST00000442677 MST1LQ2TV78 715 aa12.7□□□□□ -0.38
CDH23-207ENST00000442677 ZNF672Q499Z4 452 aaPredicted RBP12.7□□□□□ -0.38
CDH23-207ENST00000442677 RNASE13Q5GAN3 156 aaKnown RBP12.7□□□□□ -0.38
CDH23-207ENST00000442677 Q6ZVH6 145 aa12.7□□□□□ -0.38
CDH23-207ENST00000442677 KLHL30-AS1Q8NEE0 82 aa12.7□□□□□ -0.38
CDH23-207ENST00000442677 DOCK6Q96HP0 2047 aa12.7□□□□□ -0.38
CDH23-207ENST00000442677 SHISA9B4DS77 424 aa12.7□□□□□ -0.38
CDH23-207ENST00000442677 SYNJ2BPP57105 145 aa12.7□□□□□ -0.38
CDH23-207ENST00000442677 Q8N8P6 123 aa12.7□□□□□ -0.38
CDH23-207ENST00000442677 DEFB105AQ8NG35 78 aa12.7□□□□□ -0.38
CDH23-207ENST00000442677 SIGLEC9Q9Y336 463 aa12.7□□□□□ -0.38
CDH23-207ENST00000442677 I3L3M4 83 aa12.7□□□□□ -0.38
CDH23-207ENST00000442677 TMEM75Q8N9X5 138 aa12.69□□□□□ -0.38
CDH23-207ENST00000442677 MESP1Q9BRJ9 268 aa12.69□□□□□ -0.38
CDH23-207ENST00000442677 RHPN1-AS1Q9BWJ2 59 aa12.69□□□□□ -0.38
CDH23-207ENST00000442677 H3BUX3 64 aa12.69□□□□□ -0.38
CDH23-207ENST00000442677 BUB1B-PAK6H3BSN5 160 aa12.69□□□□□ -0.38
CDH23-207ENST00000442677 RNASE2P10153 161 aaKnown RBP12.69□□□□□ -0.38
CDH23-207ENST00000442677 SPINK13Q1W4C9 94 aa12.69□□□□□ -0.38
CDH23-207ENST00000442677 C5orf64Q2M2E5 130 aa12.69□□□□□ -0.38
CDH23-207ENST00000442677 VWC2Q2TAL6 325 aa12.69□□□□□ -0.38
CDH23-207ENST00000442677 SMIM20Q8N5G0 67 aa12.69□□□□□ -0.38
CDH23-207ENST00000442677 KLHDC3Q9BQ90 382 aa12.69□□□□□ -0.38
CDH23-207ENST00000442677 FAM104BQ5XKR9 115 aa12.69□□□□□ -0.38
CDH23-207ENST00000442677 CEACAM8P31997 349 aaPredicted RBP12.68□□□□□ -0.38
CDH23-207ENST00000442677 NTN5Q8WTR8 489 aaPredicted RBP12.68□□□□□ -0.38
CDH23-207ENST00000442677 MED12Q93074 2177 aa12.68□□□□□ -0.38
CDH23-207ENST00000442677 PRSS46E5RG02 174 aa12.68□□□□□ -0.38
CDH23-207ENST00000442677 LYL1P12980 280 aa12.68□□□□□ -0.38
CDH23-207ENST00000442677 Q6ZRM9 215 aa12.68□□□□□ -0.38
CDH23-207ENST00000442677 ZNRD1Q9P1U0 126 aa12.68□□□□□ -0.38
CDH23-207ENST00000442677 TAL2Q16559 108 aa12.68□□□□□ -0.38
CDH23-207ENST00000442677 DOCK7Q96N67 2140 aa12.68□□□□□ -0.38
CDH23-207ENST00000442677 EGR2P11161 476 aaPredicted RBP12.68□□□□□ -0.38
CDH23-207ENST00000442677 CMC4P56277 68 aaPredicted RBP12.68□□□□□ -0.38
CDH23-207ENST00000442677 MRPL35Q9NZE8 188 aaKnown RBP12.68□□□□□ -0.38
CDH23-207ENST00000442677 TMEM178BH3BS89 294 aa12.68□□□□□ -0.38
CDH23-207ENST00000442677 CCL25O15444 150 aa12.68□□□□□ -0.38
CDH23-207ENST00000442677 CLPSL2Q6UWE3 100 aa12.68□□□□□ -0.38
CDH23-207ENST00000442677 DOPEY2Q9Y3R5 2298 aa12.67□□□□□ -0.38
CDH23-207ENST00000442677 SRRM5B3KS81 715 aa12.67□□□□□ -0.38
CDH23-207ENST00000442677 NDUFA12Q9UI09 145 aa12.67□□□□□ -0.38
CDH23-207ENST00000442677 TRBV25-1A0A075B6N4 114 aa12.67□□□□□ -0.38
CDH23-207ENST00000442677 DEFB131AP59861 70 aa12.67□□□□□ -0.38
CDH23-207ENST00000442677 IGKV1-16P04430 117 aa12.67□□□□□ -0.38
CDH23-207ENST00000442677 C20orf204Q6ZNR8 217 aa12.67□□□□□ -0.38
CDH23-207ENST00000442677 PFN1P07737 140 aaKnown RBP12.66□□□□□ -0.38
CDH23-207ENST00000442677 SVIPQ8NHG7 77 aa12.66□□□□□ -0.38
CDH23-207ENST00000442677 EFNA4P52798 201 aa12.66□□□□□ -0.38
CDH23-207ENST00000442677 XCL2Q9UBD3 114 aa12.66□□□□□ -0.38
CDH23-207ENST00000442677 SIGLEC8Q9NYZ4 499 aa12.66□□□□□ -0.38
CDH23-207ENST00000442677 DOCK3Q8IZD9 2030 aa12.66□□□□□ -0.38
CDH23-207ENST00000442677 KLF5Q13887 457 aaPredicted RBP12.66□□□□□ -0.38
CDH23-207ENST00000442677 HS3ST6Q96QI5 342 aa12.66□□□□□ -0.38
CDH23-207ENST00000442677 CADP27708 2225 aa12.66□□□□□ -0.38
CDH23-207ENST00000442677 Q6P435 159 aa12.66□□□□□ -0.38
CDH23-207ENST00000442677 C12orf74Q32Q52 190 aa12.66□□□□□ -0.38
CDH23-207ENST00000442677 CRYGCP07315 174 aa12.65□□□□□ -0.38
CDH23-207ENST00000442677 SHANK2-AS3Q9BTD1 123 aa12.65□□□□□ -0.38
CDH23-207ENST00000442677 TMEM190Q8WZ59 177 aa12.65□□□□□ -0.38
CDH23-207ENST00000442677 DKK2Q9UBU2 259 aa12.65□□□□□ -0.38
CDH23-207ENST00000442677 LGALS9BQ3B8N2 356 aa12.65□□□□□ -0.38
CDH23-207ENST00000442677 LGALS9CQ6DKI2 356 aa12.65□□□□□ -0.38
CDH23-207ENST00000442677 GAFA1Q96PS6 74 aa12.65□□□□□ -0.38
CDH23-207ENST00000442677 TRAV12-2A0A075B6T6 113 aa12.65□□□□□ -0.38
CDH23-207ENST00000442677 KLF2Q9Y5W3 355 aaPredicted RBP12.65□□□□□ -0.38
CDH23-207ENST00000442677 HLA-DMBP28068 263 aa12.64□□□□□ -0.39
CDH23-207ENST00000442677 MRPL14Q6P1L8 145 aaKnown RBP12.64□□□□□ -0.39
CDH23-207ENST00000442677 POLEQ07864 2286 aa12.64□□□□□ -0.39
CDH23-207ENST00000442677 FAM223BA6NKX1 122 aa12.64□□□□□ -0.39
CDH23-207ENST00000442677 FAM223AQ8IWN6 122 aa12.64□□□□□ -0.39
CDH23-207ENST00000442677 ANK1P16157 1881 aa12.64□□□□□ -0.39
CDH23-207ENST00000442677 CASP8AP2Q9UKL3 1982 aa12.64□□□□□ -0.39
CDH23-207ENST00000442677 A0A1W2PPI3 338 aa12.64□□□□□ -0.39
CDH23-207ENST00000442677 F5H768 121 aa12.64□□□□□ -0.39
CDH23-207ENST00000442677 COL18A1P39060 1754 aa12.64□□□□□ -0.39
CDH23-207ENST00000442677 TRAV13-2A0A0B4J235 113 aa12.64□□□□□ -0.39
CDH23-207ENST00000442677 IGHG2P01859 326 aa12.64□□□□□ -0.39
CDH23-207ENST00000442677 SH2D6Q7Z4S9 175 aa12.64□□□□□ -0.39
CDH23-207ENST00000442677 PNRC2Q9NPJ4 139 aaKnown RBP12.64□□□□□ -0.39
CDH23-207ENST00000442677 NDUFC2O95298 119 aa12.63□□□□□ -0.39
CDH23-207ENST00000442677 LYPD2Q6UXB3 125 aa12.63□□□□□ -0.39
CDH23-207ENST00000442677 TAF1LQ8IZX4 1826 aa12.63□□□□□ -0.39
CDH23-207ENST00000442677 WNK3Q9BYP7 1800 aa12.63□□□□□ -0.39
CDH23-207ENST00000442677 ZNRF2Q8NHG8 242 aa12.63□□□□□ -0.39
CDH23-207ENST00000442677 SPANXDQ9BXN6 97 aa12.63□□□□□ -0.39
CDH23-207ENST00000442677 NACAE9PAV3 2078 aa12.63□□□□□ -0.39
CDH23-207ENST00000442677 SMIM27A0A1W2PRY6 76 aa12.63□□□□□ -0.39
CDH23-207ENST00000442677 OVOL3O00110 214 aa12.63□□□□□ -0.39
CDH23-207ENST00000442677 WFDC9Q8NEX5 89 aa12.63□□□□□ -0.39
CDH23-207ENST00000442677 ZNF492Q9P255 531 aa12.63□□□□□ -0.39
CDH23-207ENST00000442677 A0A096LPF7 62 aa12.63□□□□□ -0.39
CDH23-207ENST00000442677 CDPF1Q6NVV7 123 aa12.63□□□□□ -0.39
CDH23-207ENST00000442677 GGNQ86UU5 652 aa12.63□□□□□ -0.39
CDH23-207ENST00000442677 IGHV4-4A0A075B6R2 117 aa12.63□□□□□ -0.39
CDH23-207ENST00000442677 MINOS1Q5TGZ0 78 aa12.63□□□□□ -0.39
CDH23-207ENST00000442677 MINOS1-NBL1R4GNA1 71 aa12.63□□□□□ -0.39
CDH23-207ENST00000442677 SDHAF1A6NFY7 115 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms