RNA–Protein interactions for RNA: ENST00000441728.6

UBE2F-215, Transcript of ubiquitin conjugating enzyme E2 F (putative), human

TSL 2

Gene UBE2F, Length 1,242 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2F-215	ENST00000441728		K7EPK0	472 aa		13.78	□□□□□ -0.2
UBE2F-215	ENST00000441728	CCNK	O75909	580 aa		13.78	□□□□□ -0.2
UBE2F-215	ENST00000441728	LINC00315	P59091	139 aa		13.78	□□□□□ -0.2
UBE2F-215	ENST00000441728	ERVFC1-1	P60608	527 aa		13.78	□□□□□ -0.2
UBE2F-215	ENST00000441728	C10orf113	Q5VZT2	155 aa		13.78	□□□□□ -0.2
UBE2F-215	ENST00000441728	AGPAT2	O15120	278 aa		13.77	□□□□□ -0.21
UBE2F-215	ENST00000441728	MRPS12	O15235	138 aa	Known RBP	13.77	□□□□□ -0.21
UBE2F-215	ENST00000441728	SIVA1	O15304	175 aa		13.77	□□□□□ -0.21
UBE2F-215	ENST00000441728	RAB31	Q13636	194 aa		13.77	□□□□□ -0.21
UBE2F-215	ENST00000441728	TMEM14EP	Q6UXP3	125 aa		13.77	□□□□□ -0.21
UBE2F-215	ENST00000441728	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	13.77	□□□□□ -0.21
UBE2F-215	ENST00000441728	ZNF680	Q8NEM1	530 aa		13.77	□□□□□ -0.21
UBE2F-215	ENST00000441728	PGPEP1	Q9NXJ5	209 aa		13.77	□□□□□ -0.21
UBE2F-215	ENST00000441728	PRAC2	D3DTV9	90 aa		13.76	□□□□□ -0.21
UBE2F-215	ENST00000441728	TSC22D2	O75157	780 aa		13.76	□□□□□ -0.21
UBE2F-215	ENST00000441728	DAZ2	Q13117	558 aa	Known RBP	13.76	□□□□□ -0.21
UBE2F-215	ENST00000441728	SPANXN2	Q5MJ10	180 aa		13.76	□□□□□ -0.21
UBE2F-215	ENST00000441728		Q6ZRG5	221 aa		13.76	□□□□□ -0.21
UBE2F-215	ENST00000441728		Q6ZTI0	123 aa		13.76	□□□□□ -0.21
UBE2F-215	ENST00000441728	GSKIP	Q9P0R6	139 aa		13.76	□□□□□ -0.21
UBE2F-215	ENST00000441728	TRGV1	A0A0A0MS02	117 aa		13.75	□□□□□ -0.21
UBE2F-215	ENST00000441728		L7N2F9	121 aa		13.75	□□□□□ -0.21
UBE2F-215	ENST00000441728	SLC17A3	O00476	420 aa		13.75	□□□□□ -0.21
UBE2F-215	ENST00000441728	TAS2R30	P59541	319 aa		13.75	□□□□□ -0.21
UBE2F-215	ENST00000441728	VAMP2	P63027	116 aa		13.75	□□□□□ -0.21
UBE2F-215	ENST00000441728	GUK1	Q16774	197 aa		13.75	□□□□□ -0.21
UBE2F-215	ENST00000441728	IAH1	Q2TAA2	248 aa	Predicted RBP	13.75	□□□□□ -0.21
UBE2F-215	ENST00000441728	C4orf46	Q504U0	113 aa		13.75	□□□□□ -0.21
UBE2F-215	ENST00000441728	ODF3	Q96PU9	254 aa		13.75	□□□□□ -0.21
UBE2F-215	ENST00000441728	LRP1B	Q9NZR2	4599 aa		13.75	□□□□□ -0.21
UBE2F-215	ENST00000441728		A0A096LPF7	62 aa		13.74	□□□□□ -0.21
UBE2F-215	ENST00000441728	IFNA5	P01569	189 aa		13.74	□□□□□ -0.21
UBE2F-215	ENST00000441728	INAFM2	P0DMQ5	153 aa		13.74	□□□□□ -0.21
UBE2F-215	ENST00000441728	GGACT	Q9BVM4	153 aa		13.74	□□□□□ -0.21
UBE2F-215	ENST00000441728	FUT9	Q9Y231	359 aa		13.74	□□□□□ -0.21
UBE2F-215	ENST00000441728	ICOS	Q9Y6W8	199 aa		13.74	□□□□□ -0.21
UBE2F-215	ENST00000441728	SLC25A5	P05141	298 aa	Known RBP	13.73	□□□□□ -0.21
UBE2F-215	ENST00000441728	CT45A10	P0DMU9	189 aa		13.73	□□□□□ -0.21
UBE2F-215	ENST00000441728	OPCML	Q14982	345 aa		13.73	□□□□□ -0.21
UBE2F-215	ENST00000441728	OR1L4	Q8NGR5	311 aa		13.73	□□□□□ -0.21
UBE2F-215	ENST00000441728	ZNF431	Q8TF32	576 aa	Predicted RBP	13.73	□□□□□ -0.21
UBE2F-215	ENST00000441728	FRZB	Q92765	325 aa		13.73	□□□□□ -0.21
UBE2F-215	ENST00000441728	GSN-AS1	Q9NRJ2	163 aa		13.73	□□□□□ -0.21
UBE2F-215	ENST00000441728	C7orf71	A4D174	169 aa		13.72	□□□□□ -0.21
UBE2F-215	ENST00000441728	NAP1L6	A6NFF2	107 aa		13.72	□□□□□ -0.21
UBE2F-215	ENST00000441728	NPIPB6	E9PJ23	425 aa		13.72	□□□□□ -0.21
UBE2F-215	ENST00000441728	PAX4	O43316	350 aa		13.72	□□□□□ -0.21
UBE2F-215	ENST00000441728	OR4E1	P0C645	316 aa		13.72	□□□□□ -0.21
UBE2F-215	ENST00000441728	IGLC2	P0DOY2	106 aa		13.72	□□□□□ -0.21
UBE2F-215	ENST00000441728	CAMLG	P49069	296 aa		13.72	□□□□□ -0.21
UBE2F-215	ENST00000441728	BCAP31	P51572	246 aa		13.72	□□□□□ -0.21
UBE2F-215	ENST00000441728	TRIQK	Q629K1	86 aa		13.72	□□□□□ -0.21
UBE2F-215	ENST00000441728	CDPF1	Q6NVV7	123 aa		13.72	□□□□□ -0.21
UBE2F-215	ENST00000441728	NFE4	Q86UQ8	179 aa		13.72	□□□□□ -0.21
UBE2F-215	ENST00000441728	DNAJC4	Q9NNZ3	241 aa		13.72	□□□□□ -0.21
UBE2F-215	ENST00000441728	TRAV9-2	A0A087WT02	112 aa		13.71	□□□□□ -0.21
UBE2F-215	ENST00000441728	NDUFB6	O95139	128 aa		13.71	□□□□□ -0.21
UBE2F-215	ENST00000441728	NXPH4	O95158	308 aa		13.71	□□□□□ -0.21
UBE2F-215	ENST00000441728	ZNF846	Q147U1	533 aa		13.71	□□□□□ -0.21
UBE2F-215	ENST00000441728	C12orf45	Q8N5I9	185 aa	Predicted RBP	13.71	□□□□□ -0.21
UBE2F-215	ENST00000441728	TMEM37	Q8WXS4	190 aa		13.71	□□□□□ -0.21
UBE2F-215	ENST00000441728	VSIG2	Q96IQ7	327 aa		13.71	□□□□□ -0.21
UBE2F-215	ENST00000441728	PFDN5	Q99471	154 aa		13.71	□□□□□ -0.21
UBE2F-215	ENST00000441728	MGST2	Q99735	147 aa		13.71	□□□□□ -0.21
UBE2F-215	ENST00000441728	SRR	Q9GZT4	340 aa		13.71	□□□□□ -0.21
UBE2F-215	ENST00000441728	LINC00854	A0A1B0GVQ3	168 aa		13.7	□□□□□ -0.22
UBE2F-215	ENST00000441728		H3BQ15	152 aa		13.7	□□□□□ -0.22
UBE2F-215	ENST00000441728	EIF4E3	Q8N5X7	224 aa	Known RBP	13.7	□□□□□ -0.22
UBE2F-215	ENST00000441728	CENPX	A8MT69	81 aa		13.69	□□□□□ -0.22
UBE2F-215	ENST00000441728	MORN5	Q5VZ52	161 aa		13.69	□□□□□ -0.22
UBE2F-215	ENST00000441728	NRARP	Q7Z6K4	114 aa		13.69	□□□□□ -0.22
UBE2F-215	ENST00000441728	SAT2	Q96F10	170 aa	Predicted RBP	13.69	□□□□□ -0.22
UBE2F-215	ENST00000441728	C18orf15	Q96N68	181 aa		13.69	□□□□□ -0.22
UBE2F-215	ENST00000441728	FLVCR2	Q9UPI3	526 aa		13.69	□□□□□ -0.22
UBE2F-215	ENST00000441728	RCL1	Q9Y2P8	373 aa	Known RBP	13.69	□□□□□ -0.22
UBE2F-215	ENST00000441728	TIMM9	Q9Y5J7	89 aa		13.69	□□□□□ -0.22
UBE2F-215	ENST00000441728	RGS13	O14921	159 aa		13.68	□□□□□ -0.22
UBE2F-215	ENST00000441728	MPDU1	O75352	247 aa		13.68	□□□□□ -0.22
UBE2F-215	ENST00000441728	IGHV3-53	P01767	116 aa		13.68	□□□□□ -0.22
UBE2F-215	ENST00000441728	RNASE4	P34096	147 aa	Known RBP	13.68	□□□□□ -0.22
UBE2F-215	ENST00000441728	SLA	Q13239	276 aa		13.68	□□□□□ -0.22
UBE2F-215	ENST00000441728	MRPL53	Q96EL3	112 aa	Known RBP	13.68	□□□□□ -0.22
UBE2F-215	ENST00000441728	ARPC5L	Q9BPX5	153 aa		13.68	□□□□□ -0.22
UBE2F-215	ENST00000441728	PRELID1	Q9Y255	219 aa		13.68	□□□□□ -0.22
UBE2F-215	ENST00000441728	TRAV5	A0A0B4J249	113 aa		13.67	□□□□□ -0.22
UBE2F-215	ENST00000441728	C7orf66	A4D0T2	115 aa		13.67	□□□□□ -0.22
UBE2F-215	ENST00000441728	ZNF253	O75346	499 aa		13.67	□□□□□ -0.22
UBE2F-215	ENST00000441728	ZNF324	O75467	553 aa	Predicted RBP	13.67	□□□□□ -0.22
UBE2F-215	ENST00000441728	GPX1	P07203	203 aa		13.67	□□□□□ -0.22
UBE2F-215	ENST00000441728	FUS	P35637	526 aa	Known RBP eCLIP	13.67	□□□□□ -0.22
UBE2F-215	ENST00000441728	CAV2	P51636	162 aa		13.67	□□□□□ -0.22
UBE2F-215	ENST00000441728	ARL16	Q0P5N6	197 aa		13.67	□□□□□ -0.22
UBE2F-215	ENST00000441728	BTN1A1	Q13410	526 aa		13.67	□□□□□ -0.22
UBE2F-215	ENST00000441728	MIC13	Q5XKP0	118 aa		13.67	□□□□□ -0.22
UBE2F-215	ENST00000441728		Q6ZRN7	208 aa	Predicted RBP	13.67	□□□□□ -0.22
UBE2F-215	ENST00000441728	LYPD1	Q8N2G4	141 aa		13.67	□□□□□ -0.22
UBE2F-215	ENST00000441728	LINC00477	Q96M19	166 aa		13.67	□□□□□ -0.22
UBE2F-215	ENST00000441728	C20orf85	Q9H1P6	137 aa		13.67	□□□□□ -0.22
UBE2F-215	ENST00000441728	AAMDC	Q9H7C9	122 aa		13.67	□□□□□ -0.22
UBE2F-215	ENST00000441728	PRO0255	Q9UI72	69 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 249.3 ms