RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 LOC400499M0QZD8 3231 aa8.14□□□□□ -1.11
SYNE2-206ENST00000441438 TLCD2A6NGC4 264 aa8.14□□□□□ -1.11
SYNE2-206ENST00000441438 LYPD6Q86Y78 171 aa8.14□□□□□ -1.11
SYNE2-206ENST00000441438 C11orf72Q8NBR9 251 aa8.14□□□□□ -1.11
SYNE2-206ENST00000441438 C18orf32Q8TCD1 76 aa8.14□□□□□ -1.11
SYNE2-206ENST00000441438 RAB37Q96AX2 223 aa8.14□□□□□ -1.11
SYNE2-206ENST00000441438 SELENOKQ9Y6D0 94 aa8.14□□□□□ -1.11
SYNE2-206ENST00000441438 SMIM26A0A096LP01 95 aa8.13□□□□□ -1.11
SYNE2-206ENST00000441438 H3BMG7 143 aa8.13□□□□□ -1.11
SYNE2-206ENST00000441438 JTBO76095 146 aa8.13□□□□□ -1.11
SYNE2-206ENST00000441438 CA7P43166 264 aa8.13□□□□□ -1.11
SYNE2-206ENST00000441438 GNB2P62879 340 aa8.13□□□□□ -1.11
SYNE2-206ENST00000441438 QRFPP83859 136 aa8.13□□□□□ -1.11
SYNE2-206ENST00000441438 CMTM2Q8TAZ6 248 aa8.13□□□□□ -1.11
SYNE2-206ENST00000441438 IL1F10Q8WWZ1 152 aa8.13□□□□□ -1.11
SYNE2-206ENST00000441438 C17orf77Q96MU5 243 aa8.13□□□□□ -1.11
SYNE2-206ENST00000441438 IMUPQ9GZP8 106 aa8.13□□□□□ -1.11
SYNE2-206ENST00000441438 ADAMTS20P59510 1910 aa8.13□□□□□ -1.11
SYNE2-206ENST00000441438 PI4KAP42356 2102 aa8.13□□□□□ -1.11
SYNE2-206ENST00000441438 RIF1Q5UIP0 2472 aaKnown RBP8.12□□□□□ -1.11
SYNE2-206ENST00000441438 WNT9BO14905 357 aa8.12□□□□□ -1.11
SYNE2-206ENST00000441438 RBP4P02753 201 aa8.12□□□□□ -1.11
SYNE2-206ENST00000441438 ZNF627Q7L945 461 aa8.12□□□□□ -1.11
SYNE2-206ENST00000441438 ZNF524Q96C55 264 aa8.12□□□□□ -1.11
SYNE2-206ENST00000441438 LIME1Q9H400 295 aa8.12□□□□□ -1.11
SYNE2-206ENST00000441438 CKLFQ9UBR5 152 aa8.12□□□□□ -1.11
SYNE2-206ENST00000441438 TRAV8-3A0A0A6YYJ7 113 aa8.12□□□□□ -1.11
SYNE2-206ENST00000441438 ZNF737O75373 536 aa8.12□□□□□ -1.11
SYNE2-206ENST00000441438 WDR38Q5JTN6 314 aa8.12□□□□□ -1.11
SYNE2-206ENST00000441438 SPATA12Q7Z6I5 190 aa8.12□□□□□ -1.11
SYNE2-206ENST00000441438 MKXQ8IYA7 352 aa8.12□□□□□ -1.11
SYNE2-206ENST00000441438 C2orf50Q96LR7 162 aa8.12□□□□□ -1.11
SYNE2-206ENST00000441438 PYGO2Q9BRQ0 406 aa8.12□□□□□ -1.11
SYNE2-206ENST00000441438 IGHV4-34P06331 123 aa8.11□□□□□ -1.11
SYNE2-206ENST00000441438 C10orf105Q8TEF2 133 aa8.11□□□□□ -1.11
SYNE2-206ENST00000441438 RNF185Q96GF1 192 aa8.11□□□□□ -1.11
SYNE2-206ENST00000441438 PLA2G2EQ9NZK7 142 aa8.11□□□□□ -1.11
SYNE2-206ENST00000441438 PTPRZ1P23471 2315 aaPredicted RBP8.11□□□□□ -1.11
SYNE2-206ENST00000441438 H3BT86 120 aa8.11□□□□□ -1.11
SYNE2-206ENST00000441438 HLA-DOBP13765 273 aa8.11□□□□□ -1.11
SYNE2-206ENST00000441438 COX7CP15954 63 aa8.11□□□□□ -1.11
SYNE2-206ENST00000441438 DEFB133Q30KQ1 61 aa8.11□□□□□ -1.11
SYNE2-206ENST00000441438 LGALS9BQ3B8N2 356 aa8.11□□□□□ -1.11
SYNE2-206ENST00000441438 RPL7L1Q6DKI1 246 aaKnown RBP8.11□□□□□ -1.11
SYNE2-206ENST00000441438 C16orf47Q6ZP98 133 aaPredicted RBP8.11□□□□□ -1.11
SYNE2-206ENST00000441438 NEXN-AS1Q8NBZ9 246 aa8.11□□□□□ -1.11
SYNE2-206ENST00000441438 ZNF563Q8TA94 476 aa8.11□□□□□ -1.11
SYNE2-206ENST00000441438 PMCHL2Q9BQD1 86 aa8.11□□□□□ -1.11
SYNE2-206ENST00000441438 GPR179Q6PRD1 2367 aa8.11□□□□□ -1.11
SYNE2-206ENST00000441438 TRAV9-2A0A087WT02 112 aa8.11□□□□□ -1.11
SYNE2-206ENST00000441438 A8MUN3 132 aa8.11□□□□□ -1.11
SYNE2-206ENST00000441438 A8MWL6 223 aa8.11□□□□□ -1.11
SYNE2-206ENST00000441438 ATP1A1-AS1Q5TC04 95 aa8.11□□□□□ -1.11
SYNE2-206ENST00000441438 SYS1-DBNDD2H3BUS1 97 aa8.1□□□□□ -1.11
SYNE2-206ENST00000441438 ZNF491Q8N8L2 437 aa8.1□□□□□ -1.11
SYNE2-206ENST00000441438 OR5H2Q8NGV7 314 aa8.1□□□□□ -1.11
SYNE2-206ENST00000441438 OR9G1Q8NH87 305 aa8.1□□□□□ -1.11
SYNE2-206ENST00000441438 ZNF721Q8TF20 911 aa8.1□□□□□ -1.11
SYNE2-206ENST00000441438 TNFRSF19Q9NS68 423 aa8.1□□□□□ -1.11
SYNE2-206ENST00000441438 TP73-AS1Q9UF72 201 aa8.1□□□□□ -1.11
SYNE2-206ENST00000441438 PRO0461Q9UI25 63 aa8.1□□□□□ -1.11
SYNE2-206ENST00000441438 IGHV1-58A0A0C4DH39 117 aa8.1□□□□□ -1.11
SYNE2-206ENST00000441438 M0R381 172 aa8.1□□□□□ -1.11
SYNE2-206ENST00000441438 SYNGR2O43760 224 aa8.1□□□□□ -1.11
SYNE2-206ENST00000441438 NBEAQ8NFP9 2946 aa8.1□□□□□ -1.11
SYNE2-206ENST00000441438 NMSQ5H8A3 153 aa8.09□□□□□ -1.11
SYNE2-206ENST00000441438 C6orf223Q8N319 242 aa8.09□□□□□ -1.11
SYNE2-206ENST00000441438 OR5C1Q8NGR4 320 aa8.09□□□□□ -1.11
SYNE2-206ENST00000441438 PPDPFLQ8WWR9 84 aa8.09□□□□□ -1.11
SYNE2-206ENST00000441438 KLLNB2CW77 178 aa8.09□□□□□ -1.11
SYNE2-206ENST00000441438 ZNF688P0C7X2 276 aa8.09□□□□□ -1.11
SYNE2-206ENST00000441438 SNRPD3P62318 126 aaKnown RBP8.09□□□□□ -1.11
SYNE2-206ENST00000441438 PRNTQ86SH4 94 aa8.09□□□□□ -1.11
SYNE2-206ENST00000441438 PLEKHF2Q9H8W4 249 aa8.09□□□□□ -1.11
SYNE2-206ENST00000441438 IGKV1D-43A0A0B4J1Z2 117 aa8.09□□□□□ -1.12
SYNE2-206ENST00000441438 IGHV3-20A0A0C4DH32 117 aa8.09□□□□□ -1.12
SYNE2-206ENST00000441438 M0R378 163 aa8.09□□□□□ -1.12
SYNE2-206ENST00000441438 ANGPTL7O43827 346 aa8.09□□□□□ -1.12
SYNE2-206ENST00000441438 MYO7BQ6PIF6 2116 aa8.09□□□□□ -1.12
SYNE2-206ENST00000441438 CALYQ9NYX4 217 aa8.09□□□□□ -1.12
SYNE2-206ENST00000441438 CTSZQ9UBR2 303 aa8.09□□□□□ -1.12
SYNE2-206ENST00000441438 SERP1Q9Y6X1 66 aa8.09□□□□□ -1.12
SYNE2-206ENST00000441438 IGKV1D-42A0A075B6H8 117 aa8.08□□□□□ -1.12
SYNE2-206ENST00000441438 IGHV5-51A0A0C4DH38 117 aa8.08□□□□□ -1.12
SYNE2-206ENST00000441438 ASAH2BP0C7U1 165 aa8.08□□□□□ -1.12
SYNE2-206ENST00000441438 HLA-DRB4P13762 266 aa8.08□□□□□ -1.12
SYNE2-206ENST00000441438 SUPT4H1P63272 117 aaKnown RBP8.08□□□□□ -1.12
SYNE2-206ENST00000441438 RFESDQ8TAC1 157 aa8.08□□□□□ -1.12
SYNE2-206ENST00000441438 C19orf25Q9UFG5 118 aaPredicted RBP8.08□□□□□ -1.12
SYNE2-206ENST00000441438 HLA-DRB4X5D2U9 266 aa8.08□□□□□ -1.12
SYNE2-206ENST00000441438 FER1L5A0AVI2 2057 aa8.08□□□□□ -1.12
SYNE2-206ENST00000441438 DOCK7Q96N67 2140 aa8.08□□□□□ -1.12
SYNE2-206ENST00000441438 C15orf62A8K5M9 175 aa8.08□□□□□ -1.12
SYNE2-206ENST00000441438 K7N7A8 449 aa8.08□□□□□ -1.12
SYNE2-206ENST00000441438 LST1O00453 97 aa8.08□□□□□ -1.12
SYNE2-206ENST00000441438 TCL1BO95988 128 aa8.08□□□□□ -1.12
SYNE2-206ENST00000441438 Q6ZS49 121 aa8.08□□□□□ -1.12
SYNE2-206ENST00000441438 BPIFA4PQ86YQ2 179 aa8.08□□□□□ -1.12
SYNE2-206ENST00000441438 TAS2R4Q9NYW5 299 aa8.08□□□□□ -1.12
SYNE2-206ENST00000441438 SEC61BP60468 96 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms