RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 A0A1B0GW15 77 aa7.18□□□□□ -1.26
COPB1-202ENST00000439561 NDUFS7O75251 213 aa7.18□□□□□ -1.26
COPB1-202ENST00000439561 FXYD2P54710 66 aa7.18□□□□□ -1.26
COPB1-202ENST00000439561 ETDBQ3ZM63 59 aa7.18□□□□□ -1.26
COPB1-202ENST00000439561 DEFB104AQ8WTQ1 72 aa7.18□□□□□ -1.26
COPB1-202ENST00000439561 SIGMAR1Q99720 223 aa7.18□□□□□ -1.26
COPB1-202ENST00000439561 MSRB1Q9NZV6 116 aa7.18□□□□□ -1.26
COPB1-202ENST00000439561 IGLV3-9A0A075B6K5 115 aa7.17□□□□□ -1.26
COPB1-202ENST00000439561 LOC107984156A0A0G2JMH3 177 aa7.17□□□□□ -1.26
COPB1-202ENST00000439561 PRRG2O14669 202 aa7.17□□□□□ -1.26
COPB1-202ENST00000439561 GATA4P43694 442 aa7.17□□□□□ -1.26
COPB1-202ENST00000439561 LGALS9BQ3B8N2 356 aa7.17□□□□□ -1.26
COPB1-202ENST00000439561 LGALS9CQ6DKI2 356 aa7.17□□□□□ -1.26
COPB1-202ENST00000439561 ARL17AQ8IVW1 177 aa7.17□□□□□ -1.26
COPB1-202ENST00000439561 WFDC12Q8WWY7 111 aa7.17□□□□□ -1.26
COPB1-202ENST00000439561 NPFFR1Q9GZQ6 430 aa7.17□□□□□ -1.26
COPB1-202ENST00000439561 BOD1L1Q8NFC6 3051 aa7.17□□□□□ -1.26
COPB1-202ENST00000439561 G3V4G9 280 aa7.17□□□□□ -1.26
COPB1-202ENST00000439561 IGLV2-23P01705 113 aa7.17□□□□□ -1.26
COPB1-202ENST00000439561 GATA1P15976 413 aaPredicted RBP7.17□□□□□ -1.26
COPB1-202ENST00000439561 AZU1P20160 251 aa7.17□□□□□ -1.26
COPB1-202ENST00000439561 SCGB1D4Q6XE38 83 aa7.17□□□□□ -1.26
COPB1-202ENST00000439561 ZNF479Q96JC4 524 aa7.17□□□□□ -1.26
COPB1-202ENST00000439561 A0A1B0GWB2 263 aa7.17□□□□□ -1.26
COPB1-202ENST00000439561 C19orf67A6NJJ6 358 aa7.17□□□□□ -1.26
COPB1-202ENST00000439561 TMEM178BH3BS89 294 aa7.17□□□□□ -1.26
COPB1-202ENST00000439561 TGFAP01135 160 aa7.17□□□□□ -1.26
COPB1-202ENST00000439561 IGKCP01834 107 aa7.17□□□□□ -1.26
COPB1-202ENST00000439561 BMI1P35226 326 aa7.17□□□□□ -1.26
COPB1-202ENST00000439561 ADIPOQQ15848 244 aa7.17□□□□□ -1.26
COPB1-202ENST00000439561 SEM1Q6ZVN7 128 aa7.17□□□□□ -1.26
COPB1-202ENST00000439561 TMEM158Q8WZ71 300 aa7.17□□□□□ -1.26
COPB1-202ENST00000439561 IGHV1-3A0A0C4DH29 117 aa7.16□□□□□ -1.26
COPB1-202ENST00000439561 H3BMG7 143 aa7.16□□□□□ -1.26
COPB1-202ENST00000439561 CIDEAO60543 219 aa7.16□□□□□ -1.26
COPB1-202ENST00000439561 SCGB2A1O75556 95 aa7.16□□□□□ -1.26
COPB1-202ENST00000439561 HLA-DMBP28068 263 aa7.16□□□□□ -1.26
COPB1-202ENST00000439561 SPANXN1Q5VSR9 72 aa7.16□□□□□ -1.26
COPB1-202ENST00000439561 SH2D6Q7Z4S9 175 aa7.16□□□□□ -1.26
COPB1-202ENST00000439561 BOD1L2Q8IYS8 172 aa7.16□□□□□ -1.26
COPB1-202ENST00000439561 SHANK2-AS3Q9BTD1 123 aa7.16□□□□□ -1.26
COPB1-202ENST00000439561 CTSZQ9UBR2 303 aa7.16□□□□□ -1.26
COPB1-202ENST00000439561 TRAV40A0A0B4J280 105 aa7.16□□□□□ -1.26
COPB1-202ENST00000439561 TIMM23O14925 209 aa7.16□□□□□ -1.26
COPB1-202ENST00000439561 IGKV1-17P01599 117 aa7.16□□□□□ -1.26
COPB1-202ENST00000439561 ARPC1AQ92747 370 aa7.16□□□□□ -1.26
COPB1-202ENST00000439561 NCOR1P1Q9H4R4 102 aa7.16□□□□□ -1.26
COPB1-202ENST00000439561 LOC400499M0QZD8 3231 aa7.16□□□□□ -1.26
COPB1-202ENST00000439561 TECTAO75443 2155 aa7.16□□□□□ -1.26
COPB1-202ENST00000439561 NPIPB6E9PJ23 425 aa7.16□□□□□ -1.26
COPB1-202ENST00000439561 CDX4O14627 284 aaPredicted RBP7.16□□□□□ -1.26
COPB1-202ENST00000439561 LOXP28300 417 aaPredicted RBP7.16□□□□□ -1.26
COPB1-202ENST00000439561 SRSF9Q13242 221 aaKnown RBP eCLIP7.16□□□□□ -1.261e-11■■■■□ 22.6
COPB1-202ENST00000439561 ASCL5Q7RTU5 278 aa7.16□□□□□ -1.26
COPB1-202ENST00000439561 ASPMQ8IZT6 3477 aa7.16□□□□□ -1.26
COPB1-202ENST00000439561 TMEM8BA6NDV4 472 aa7.15□□□□□ -1.26
COPB1-202ENST00000439561 APOBEC3AP31941 199 aaPredicted RBP7.15□□□□□ -1.26
COPB1-202ENST00000439561 MFAP4P55083 255 aa7.15□□□□□ -1.26
COPB1-202ENST00000439561 ERCC8Q13216 396 aa7.15□□□□□ -1.26
COPB1-202ENST00000439561 TTC9CQ8N5M4 171 aa7.15□□□□□ -1.26
COPB1-202ENST00000439561 PRSS33Q8NF86 280 aa7.15□□□□□ -1.26
COPB1-202ENST00000439561 ZNF418Q8TF45 676 aaPredicted RBP7.15□□□□□ -1.26
COPB1-202ENST00000439561 IGKV3-7A0A075B6H7 116 aa7.15□□□□□ -1.27
COPB1-202ENST00000439561 MBD3L4A6NDZ8 208 aaPredicted RBP7.15□□□□□ -1.27
COPB1-202ENST00000439561 MBD3L3A6NE82 208 aaPredicted RBP7.15□□□□□ -1.27
COPB1-202ENST00000439561 MBD3L5A6NJ08 208 aaPredicted RBP7.15□□□□□ -1.27
COPB1-202ENST00000439561 H3BVH4 76 aa7.15□□□□□ -1.27
COPB1-202ENST00000439561 DPM2O94777 84 aa7.15□□□□□ -1.27
COPB1-202ENST00000439561 ZNF883P0CG24 379 aa7.15□□□□□ -1.27
COPB1-202ENST00000439561 EGR2P11161 476 aaPredicted RBP7.15□□□□□ -1.27
COPB1-202ENST00000439561 RPL7P18124 248 aaKnown RBP7.15□□□□□ -1.27
COPB1-202ENST00000439561 S100A4P26447 101 aaKnown RBP7.15□□□□□ -1.27
COPB1-202ENST00000439561 CRIP1P50238 77 aa7.15□□□□□ -1.27
COPB1-202ENST00000439561 RPL11P62913 178 aaKnown RBP7.15□□□□□ -1.27
COPB1-202ENST00000439561 WFDC2Q14508 124 aa7.15□□□□□ -1.27
COPB1-202ENST00000439561 SIGLEC15Q6ZMC9 328 aa7.15□□□□□ -1.27
COPB1-202ENST00000439561 MBD3L2Q8NHZ7 208 aaPredicted RBP7.15□□□□□ -1.27
COPB1-202ENST00000439561 ZNF502Q8TBZ5 544 aa7.15□□□□□ -1.27
COPB1-202ENST00000439561 RALYQ9UKM9 306 aaKnown RBP7.15□□□□□ -1.27
COPB1-202ENST00000439561 FSTL3O95633 263 aa7.14□□□□□ -1.27
COPB1-202ENST00000439561 ECSCRQ19T08 205 aa7.14□□□□□ -1.27
COPB1-202ENST00000439561 TEX36Q5VZQ5 186 aa7.14□□□□□ -1.27
COPB1-202ENST00000439561 DEFB123Q8N688 67 aa7.14□□□□□ -1.27
COPB1-202ENST00000439561 FAM215AQ9Y5M1 114 aa7.14□□□□□ -1.27
COPB1-202ENST00000439561 IGKV2D-26A0A0A0MRZ7 120 aa7.14□□□□□ -1.27
COPB1-202ENST00000439561 TRAV26-2A0A0B4J265 109 aa7.14□□□□□ -1.27
COPB1-202ENST00000439561 A0A1B0GV72 72 aa7.14□□□□□ -1.27
COPB1-202ENST00000439561 IGLV2-11P01706 119 aa7.14□□□□□ -1.27
COPB1-202ENST00000439561 VGLL1Q99990 258 aa7.14□□□□□ -1.27
COPB1-202ENST00000439561 CYSLTR1Q9Y271 337 aa7.14□□□□□ -1.27
COPB1-202ENST00000439561 DCHS1Q96JQ0 3298 aa7.14□□□□□ -1.27
COPB1-202ENST00000439561 CREBBPQ92793 2442 aa7.14□□□□□ -1.27
COPB1-202ENST00000439561 TNFRSF6BO95407 300 aa7.14□□□□□ -1.27
COPB1-202ENST00000439561 MGPP08493 103 aa7.14□□□□□ -1.27
COPB1-202ENST00000439561 RBPJQ06330 500 aa7.14□□□□□ -1.27
COPB1-202ENST00000439561 ZNF491Q8N8L2 437 aa7.14□□□□□ -1.27
COPB1-202ENST00000439561 C21orf62Q9NYP8 219 aa7.14□□□□□ -1.27
COPB1-202ENST00000439561 COL6A6A6NMZ7 2263 aa7.14□□□□□ -1.27
COPB1-202ENST00000439561 LY6HO94772 140 aa7.13□□□□□ -1.27
COPB1-202ENST00000439561 FTH1P19P0C7X4 201 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 153.3 ms