RNA–Protein interactions for RNA: ENST00000439512.5

TOM1-207, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-207ENST00000439512 PHLDA1Q8WV24 401 aaPredicted RBP11.9□□□□□ -0.5
TOM1-207ENST00000439512 NEU1Q99519 415 aa11.9□□□□□ -0.5
TOM1-207ENST00000439512 TMEM208Q9BTX3 173 aa11.9□□□□□ -0.5
TOM1-207ENST00000439512 PAXXQ9BUH6 204 aa11.9□□□□□ -0.5
TOM1-207ENST00000439512 TRAV12-2A0A075B6T6 113 aa11.89□□□□□ -0.51
TOM1-207ENST00000439512 NUPR2A6NF83 97 aa11.89□□□□□ -0.51
TOM1-207ENST00000439512 BOLA2-SMG1P6H3BVE0 249 aa11.89□□□□□ -0.51
TOM1-207ENST00000439512 CRXO43186 299 aaPredicted RBP11.89□□□□□ -0.51
TOM1-207ENST00000439512 OR10J4P0C629 311 aa11.89□□□□□ -0.51
TOM1-207ENST00000439512 NBEAP1P0C6P0 100 aa11.89□□□□□ -0.51
TOM1-207ENST00000439512 RNF141Q8WVD5 230 aa11.89□□□□□ -0.51
TOM1-207ENST00000439512 M0R3E3 92 aa11.88□□□□□ -0.51
TOM1-207ENST00000439512 EMP1P54849 157 aa11.88□□□□□ -0.51
TOM1-207ENST00000439512 PDE6HQ13956 83 aa11.88□□□□□ -0.51
TOM1-207ENST00000439512 ZNF266Q14584 549 aa11.88□□□□□ -0.51
TOM1-207ENST00000439512 ACOT6Q3I5F7 207 aaPredicted RBP11.88□□□□□ -0.51
TOM1-207ENST00000439512 BAP18Q8IXM2 172 aa11.88□□□□□ -0.51
TOM1-207ENST00000439512 EXOC3-AS1Q8N2X6 119 aa11.88□□□□□ -0.51
TOM1-207ENST00000439512 HSD17B11Q8NBQ5 300 aa11.88□□□□□ -0.51
TOM1-207ENST00000439512 FXYD5Q96DB9 178 aa11.88□□□□□ -0.51
TOM1-207ENST00000439512 LCE6AA0A183 80 aa11.87□□□□□ -0.51
TOM1-207ENST00000439512 OR7C2O60412 319 aa11.87□□□□□ -0.51
TOM1-207ENST00000439512 EIF3GO75821 320 aaKnown RBP eCLIP11.87□□□□□ -0.51
TOM1-207ENST00000439512 INSP01308 110 aa11.87□□□□□ -0.51
TOM1-207ENST00000439512 HBE1P02100 147 aa11.87□□□□□ -0.51
TOM1-207ENST00000439512 ICAM4Q14773 271 aa11.87□□□□□ -0.51
TOM1-207ENST00000439512 AAMDCQ9H7C9 122 aa11.87□□□□□ -0.51
TOM1-207ENST00000439512 TNFSF18Q9UNG2 199 aa11.87□□□□□ -0.51
TOM1-207ENST00000439512 PRELID1Q9Y255 219 aa11.87□□□□□ -0.51
TOM1-207ENST00000439512 KLK5Q9Y337 293 aaPredicted RBP11.87□□□□□ -0.51
TOM1-207ENST00000439512 A0A1W2PPV4 95 aa11.86□□□□□ -0.51
TOM1-207ENST00000439512 RNF222A6NCQ9 220 aa11.86□□□□□ -0.51
TOM1-207ENST00000439512 PRM2P04554 102 aa11.86□□□□□ -0.51
TOM1-207ENST00000439512 M6PRP20645 277 aa11.86□□□□□ -0.51
TOM1-207ENST00000439512 TAS2R45P59539 299 aa11.86□□□□□ -0.51
TOM1-207ENST00000439512 RAB2AP61019 212 aa11.86□□□□□ -0.51
TOM1-207ENST00000439512 RRN3P1Q2M238 152 aa11.86□□□□□ -0.51
TOM1-207ENST00000439512 RPP25LQ8N5L8 163 aaKnown RBP11.86□□□□□ -0.51
TOM1-207ENST00000439512 MRPL53Q96EL3 112 aaKnown RBP11.86□□□□□ -0.51
TOM1-207ENST00000439512 ZNF503Q96F45 646 aa11.86□□□□□ -0.51
TOM1-207ENST00000439512 CELA1Q9UNI1 258 aa11.86□□□□□ -0.51
TOM1-207ENST00000439512 TMEM189A5PLL7 270 aa11.85□□□□□ -0.51
TOM1-207ENST00000439512 ZNF705GA8MUZ8 300 aaPredicted RBP11.85□□□□□ -0.51
TOM1-207ENST00000439512 G3V3Q6 166 aa11.85□□□□□ -0.51
TOM1-207ENST00000439512 SMLR1H3BR10 107 aa11.85□□□□□ -0.51
TOM1-207ENST00000439512 CT45A10P0DMU9 189 aa11.85□□□□□ -0.51
TOM1-207ENST00000439512 ATP6V0CP27449 155 aa11.85□□□□□ -0.51
TOM1-207ENST00000439512 CDKN1BP46527 198 aa11.85□□□□□ -0.51
TOM1-207ENST00000439512 RANP62826 216 aaKnown RBP11.85□□□□□ -0.51
TOM1-207ENST00000439512 FAM122CQ6P4D5 195 aa11.85□□□□□ -0.51
TOM1-207ENST00000439512 ZNF767PQ75MW2 155 aa11.85□□□□□ -0.51
TOM1-207ENST00000439512 OR10G4Q8NGN3 311 aa11.85□□□□□ -0.51
TOM1-207ENST00000439512 OR10G9Q8NGN4 311 aa11.85□□□□□ -0.51
TOM1-207ENST00000439512 OR10G7Q8NGN6 311 aa11.85□□□□□ -0.51
TOM1-207ENST00000439512 LINC01587Q99440 93 aa11.85□□□□□ -0.51
TOM1-207ENST00000439512 HYDINQ4G0P3 5121 aa11.84□□□□□ -0.51
TOM1-207ENST00000439512 LOC102723971A0A1B0GUV8 181 aa11.84□□□□□ -0.51
TOM1-207ENST00000439512 JTBO76095 146 aa11.84□□□□□ -0.51
TOM1-207ENST00000439512 SPART-AS1P0CW21 52 aa11.84□□□□□ -0.51
TOM1-207ENST00000439512 TSPOP30536 169 aa11.84□□□□□ -0.51
TOM1-207ENST00000439512 UBE2L3P68036 154 aaKnown RBP11.84□□□□□ -0.51
TOM1-207ENST00000439512 ERCC8Q13216 396 aa11.84□□□□□ -0.51
TOM1-207ENST00000439512 KIR3DS1Q14943 382 aa11.84□□□□□ -0.51
TOM1-207ENST00000439512 C12orf74Q32Q52 190 aa11.84□□□□□ -0.51
TOM1-207ENST00000439512 KHDC3LQ587J8 217 aa11.84□□□□□ -0.51
TOM1-207ENST00000439512 RPL7L1Q6DKI1 246 aaKnown RBP11.84□□□□□ -0.51
TOM1-207ENST00000439512 PHYHIPLQ96FC7 376 aa11.84□□□□□ -0.51
TOM1-207ENST00000439512 BORCS7-ASMTA0A0B4J1R7 106 aa11.83□□□□□ -0.52
TOM1-207ENST00000439512 NPIPB6E9PJ23 425 aa11.83□□□□□ -0.52
TOM1-207ENST00000439512 J3KRW8 73 aa11.83□□□□□ -0.52
TOM1-207ENST00000439512 HMGB3O15347 200 aaKnown RBP11.83□□□□□ -0.52
TOM1-207ENST00000439512 ARPC5O15511 151 aa11.83□□□□□ -0.52
TOM1-207ENST00000439512 HTN1P15515 57 aa11.83□□□□□ -0.52
TOM1-207ENST00000439512 Q6ZTC4 211 aa11.83□□□□□ -0.52
TOM1-207ENST00000439512 OR2G3Q8NGZ4 309 aa11.83□□□□□ -0.52
TOM1-207ENST00000439512 PSMG3Q9BT73 122 aaPredicted RBP11.83□□□□□ -0.52
TOM1-207ENST00000439512 AGPAT4-IT1Q9H0P7 198 aa11.83□□□□□ -0.52
TOM1-207ENST00000439512 C11orf94C9JXX5 98 aa11.82□□□□□ -0.52
TOM1-207ENST00000439512 SERF2P84101 59 aa11.82□□□□□ -0.52
TOM1-207ENST00000439512 LINC00477Q96M19 166 aa11.82□□□□□ -0.52
TOM1-207ENST00000439512 SH3BGRL3Q9H299 93 aa11.82□□□□□ -0.52
TOM1-207ENST00000439512 PLA2G2EQ9NZK7 142 aa11.82□□□□□ -0.52
TOM1-207ENST00000439512 YTHDF2Q9Y5A9 579 aaKnown RBP11.82□□□□□ -0.52
TOM1-207ENST00000439512 AZU1P20160 251 aa11.81□□□□□ -0.52
TOM1-207ENST00000439512 LEPP41159 167 aa11.81□□□□□ -0.52
TOM1-207ENST00000439512 FAM222AQ5U5X8 452 aa11.81□□□□□ -0.52
TOM1-207ENST00000439512 LYPD1Q8N2G4 141 aa11.81□□□□□ -0.52
TOM1-207ENST00000439512 TMEM256Q8N2U0 113 aa11.81□□□□□ -0.52
TOM1-207ENST00000439512 C2CD4CQ8TF44 421 aa11.81□□□□□ -0.52
TOM1-207ENST00000439512 Q9H3A6 140 aa11.81□□□□□ -0.52
TOM1-207ENST00000439512 DKK2Q9UBU2 259 aa11.81□□□□□ -0.52
TOM1-207ENST00000439512 IGKV2-40A0A087WW87 121 aaPredicted RBP11.8□□□□□ -0.52
TOM1-207ENST00000439512 TRAV10A0A0B4J240 114 aa11.8□□□□□ -0.52
TOM1-207ENST00000439512 IGKV2D-40P01614 121 aaPredicted RBP11.8□□□□□ -0.52
TOM1-207ENST00000439512 MBP02144 154 aa11.8□□□□□ -0.52
TOM1-207ENST00000439512 CSN1S1P47710 185 aa11.8□□□□□ -0.52
TOM1-207ENST00000439512 CDC34P49427 236 aaPredicted RBP11.8□□□□□ -0.52
TOM1-207ENST00000439512 GFI1BQ5VTD9 330 aa11.8□□□□□ -0.52
TOM1-207ENST00000439512 PQLC2Q6ZP29 291 aa11.8□□□□□ -0.52
TOM1-207ENST00000439512 RAB24Q969Q5 203 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms