RNA–Protein interactions for RNA: ENST00000438581.6

TMEM39A-202, Transcript of transmembrane protein 39A, humanhuman

TSL 1 (best)

Gene TMEM39A, Length 4,393 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-202ENST00000438581 DGAT2L7PQ6IED9 249 aa6.54□□□□□ -1.36
TMEM39A-202ENST00000438581 TMEM170AQ8WVE7 144 aa6.54□□□□□ -1.36
TMEM39A-202ENST00000438581 MGST2Q99735 147 aa6.54□□□□□ -1.36
TMEM39A-202ENST00000438581 LAMTOR3Q9UHA4 124 aa6.54□□□□□ -1.36
TMEM39A-202ENST00000438581 PEX7O00628 323 aa6.54□□□□□ -1.36
TMEM39A-202ENST00000438581 ISLRO14498 428 aa6.54□□□□□ -1.36
TMEM39A-202ENST00000438581 NDUFC2O95298 119 aa6.54□□□□□ -1.36
TMEM39A-202ENST00000438581 PSG9Q00887 426 aa6.54□□□□□ -1.36
TMEM39A-202ENST00000438581 MLST8Q9BVC4 326 aa6.54□□□□□ -1.36
TMEM39A-202ENST00000438581 IFITM10A6NMD0 228 aa6.53□□□□□ -1.36
TMEM39A-202ENST00000438581 OOSP1A8MZH6 123 aa6.53□□□□□ -1.36
TMEM39A-202ENST00000438581 APCSP02743 223 aa6.53□□□□□ -1.36
TMEM39A-202ENST00000438581 GPX1P07203 203 aa6.53□□□□□ -1.36
TMEM39A-202ENST00000438581 RNASE2P10153 161 aaKnown RBP6.53□□□□□ -1.36
TMEM39A-202ENST00000438581 FABP2P12104 132 aa6.53□□□□□ -1.36
TMEM39A-202ENST00000438581 FAM159AQ6UWV7 190 aa6.53□□□□□ -1.36
TMEM39A-202ENST00000438581 OR2K2Q8NGT1 345 aa6.53□□□□□ -1.36
TMEM39A-202ENST00000438581 ITLN2Q8WWU7 325 aaPredicted RBP6.53□□□□□ -1.36
TMEM39A-202ENST00000438581 Q9H3A6 140 aa6.53□□□□□ -1.36
TMEM39A-202ENST00000438581 TPSG1Q9NRR2 321 aa6.53□□□□□ -1.36
TMEM39A-202ENST00000438581 ARHGAP21Q5T5U3 1957 aa6.53□□□□□ -1.36
TMEM39A-202ENST00000438581 FABP5P3A8MUU1 101 aa6.53□□□□□ -1.36
TMEM39A-202ENST00000438581 SRD5A1P18405 259 aa6.53□□□□□ -1.36
TMEM39A-202ENST00000438581 PAX9P55771 341 aa6.53□□□□□ -1.36
TMEM39A-202ENST00000438581 TIRAPP58753 221 aa6.53□□□□□ -1.36
TMEM39A-202ENST00000438581 TWIST1Q15672 202 aa6.53□□□□□ -1.36
TMEM39A-202ENST00000438581 NEGR1Q7Z3B1 354 aa6.53□□□□□ -1.36
TMEM39A-202ENST00000438581 OR4X2Q8NGF9 303 aa6.53□□□□□ -1.36
TMEM39A-202ENST00000438581 ST20Q9HBF5 79 aa6.53□□□□□ -1.36
TMEM39A-202ENST00000438581 C2CD3Q4AC94 2353 aa6.53□□□□□ -1.36
TMEM39A-202ENST00000438581 LOC389332A0A1B0GUA5 103 aa6.53□□□□□ -1.36
TMEM39A-202ENST00000438581 SRRM4A7MD48 611 aaKnown RBP6.53□□□□□ -1.36
TMEM39A-202ENST00000438581 K7EP34 96 aa6.53□□□□□ -1.36
TMEM39A-202ENST00000438581 SLC25A16P16260 332 aa6.53□□□□□ -1.36
TMEM39A-202ENST00000438581 SORL1Q92673 2214 aa6.53□□□□□ -1.36
TMEM39A-202ENST00000438581 LHBP01229 141 aa6.53□□□□□ -1.36
TMEM39A-202ENST00000438581 IGLC1P0CG04 106 aa6.53□□□□□ -1.36
TMEM39A-202ENST00000438581 FCER1GP30273 86 aa6.53□□□□□ -1.36
TMEM39A-202ENST00000438581 SPATA45Q537H7 98 aa6.53□□□□□ -1.36
TMEM39A-202ENST00000438581 ATP6V0E2Q8NHE4 81 aa6.53□□□□□ -1.36
TMEM39A-202ENST00000438581 F11RQ9Y624 299 aaKnown RBP6.53□□□□□ -1.36
TMEM39A-202ENST00000438581 A0A1W2PRE2 83 aa6.52□□□□□ -1.37
TMEM39A-202ENST00000438581 B5MCH6 92 aa6.52□□□□□ -1.37
TMEM39A-202ENST00000438581 VDAC2P45880 294 aaPredicted RBP6.52□□□□□ -1.37
TMEM39A-202ENST00000438581 RPL15P61313 204 aaKnown RBP6.52□□□□□ -1.37
TMEM39A-202ENST00000438581 RNF5Q99942 180 aa6.52□□□□□ -1.37
TMEM39A-202ENST00000438581 AGMATQ9BSE5 352 aa6.52□□□□□ -1.37
TMEM39A-202ENST00000438581 KAAG1Q9UBP8 84 aa6.52□□□□□ -1.37
TMEM39A-202ENST00000438581 PRRC2AP48634 2157 aaKnown RBP6.52□□□□□ -1.37
TMEM39A-202ENST00000438581 OR5AL1P0C617 328 aa6.52□□□□□ -1.37
TMEM39A-202ENST00000438581 MALP21145 153 aa6.52□□□□□ -1.37
TMEM39A-202ENST00000438581 HINT1P49773 126 aaPredicted RBP6.52□□□□□ -1.37
TMEM39A-202ENST00000438581 UBE2E1P51965 193 aa6.52□□□□□ -1.37
TMEM39A-202ENST00000438581 LINC01356Q8N9X3 169 aa6.52□□□□□ -1.37
TMEM39A-202ENST00000438581 Q96MF0 132 aa6.52□□□□□ -1.37
TMEM39A-202ENST00000438581 SCRT1Q9BWW7 348 aa6.52□□□□□ -1.37
TMEM39A-202ENST00000438581 KIAA1549Q9HCM3 1950 aa6.52□□□□□ -1.37
TMEM39A-202ENST00000438581 PMS2P5A8MQ11 134 aa6.52□□□□□ -1.37
TMEM39A-202ENST00000438581 GUSBP1Q15486 140 aa6.52□□□□□ -1.37
TMEM39A-202ENST00000438581 PVRIGQ6DKI7 326 aa6.52□□□□□ -1.37
TMEM39A-202ENST00000438581 Q6Q795 121 aa6.52□□□□□ -1.37
TMEM39A-202ENST00000438581 SDF2L1Q9HCN8 221 aa6.52□□□□□ -1.37
TMEM39A-202ENST00000438581 MTORP42345 2549 aa6.52□□□□□ -1.37
TMEM39A-202ENST00000438581 G3V318 75 aa6.51□□□□□ -1.37
TMEM39A-202ENST00000438581 LYL1P12980 280 aa6.51□□□□□ -1.37
TMEM39A-202ENST00000438581 CBLN1P23435 193 aa6.51□□□□□ -1.37
TMEM39A-202ENST00000438581 RPL23P62829 140 aaKnown RBP6.51□□□□□ -1.37
TMEM39A-202ENST00000438581 CT83Q5H943 113 aa6.51□□□□□ -1.37
TMEM39A-202ENST00000438581 FOXI2Q6ZQN5 318 aa6.51□□□□□ -1.37
TMEM39A-202ENST00000438581 TRAV9-1A0A075B6T8 112 aa6.51□□□□□ -1.37
TMEM39A-202ENST00000438581 SNRPD3P62318 126 aaKnown RBP6.51□□□□□ -1.37
TMEM39A-202ENST00000438581 ZNF833PQ6ZTB9 187 aa6.51□□□□□ -1.37
TMEM39A-202ENST00000438581 RNASE7Q9H1E1 156 aaKnown RBP6.51□□□□□ -1.37
TMEM39A-202ENST00000438581 CDH23Q9H251 3354 aa6.51□□□□□ -1.37
TMEM39A-202ENST00000438581 F8W1H4 67 aa6.51□□□□□ -1.37
TMEM39A-202ENST00000438581 PRSS1P07477 247 aa6.51□□□□□ -1.37
TMEM39A-202ENST00000438581 SPINK8P0C7L1 97 aa6.51□□□□□ -1.37
TMEM39A-202ENST00000438581 CD33P20138 364 aa6.51□□□□□ -1.37
TMEM39A-202ENST00000438581 PAX8Q06710 450 aa6.51□□□□□ -1.37
TMEM39A-202ENST00000438581 DEFB125Q8N687 156 aa6.51□□□□□ -1.37
TMEM39A-202ENST00000438581 OCC1Q8TAD7 63 aa6.51□□□□□ -1.37
TMEM39A-202ENST00000438581 TMEM14BQ9NUH8 114 aa6.51□□□□□ -1.37
TMEM39A-202ENST00000438581 GRIFINA4D1Z8 144 aa6.5□□□□□ -1.37
TMEM39A-202ENST00000438581 MRPL23Q16540 153 aaKnown RBP6.5□□□□□ -1.37
TMEM39A-202ENST00000438581 MRPL18Q9H0U6 180 aaKnown RBP6.5□□□□□ -1.37
TMEM39A-202ENST00000438581 SIGLEC8Q9NYZ4 499 aa6.5□□□□□ -1.37
TMEM39A-202ENST00000438581 IGHV1-69DA0A0B4J2H0 117 aa6.5□□□□□ -1.37
TMEM39A-202ENST00000438581 IGLC7A0M8Q6 106 aa6.5□□□□□ -1.37
TMEM39A-202ENST00000438581 IGHV1-69P01742 117 aa6.5□□□□□ -1.37
TMEM39A-202ENST00000438581 NDPQ00604 133 aa6.5□□□□□ -1.37
TMEM39A-202ENST00000438581 EXOC3-AS1Q8N2X6 119 aa6.5□□□□□ -1.37
TMEM39A-202ENST00000438581 DDB2Q92466 427 aa6.5□□□□□ -1.37
TMEM39A-202ENST00000438581 C1orf43Q9BWL3 253 aa6.5□□□□□ -1.37
TMEM39A-202ENST00000438581 PHLDA3Q9Y5J5 127 aa6.5□□□□□ -1.37
TMEM39A-202ENST00000438581 NCKAP5O14513 1909 aa6.5□□□□□ -1.37
TMEM39A-202ENST00000438581 FN1P02751 2386 aaKnown RBP6.5□□□□□ -1.37
TMEM39A-202ENST00000438581 IGHV4-61A0A0C4DH41 118 aa6.5□□□□□ -1.37
TMEM39A-202ENST00000438581 DIRC3C9JPN6 131 aa6.5□□□□□ -1.37
TMEM39A-202ENST00000438581 FOXA3P55318 350 aaPredicted RBP6.5□□□□□ -1.37
TMEM39A-202ENST00000438581 WT1-ASQ06250 92 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms