RNA–Protein interactions for RNA: ENST00000437811.1

HLA-DPA1-243, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-243ENST00000437811 C2orf70A6NJV1 201 aa10.29□□□□□ -0.76
HLA-DPA1-243ENST00000437811 MT-ND4LP03901 98 aa10.29□□□□□ -0.76
HLA-DPA1-243ENST00000437811 FHL3Q13643 280 aa10.29□□□□□ -0.76
HLA-DPA1-243ENST00000437811 C4orf48Q5BLP8 95 aa10.29□□□□□ -0.76
HLA-DPA1-243ENST00000437811 IGFL4Q6B9Z1 124 aa10.29□□□□□ -0.76
HLA-DPA1-243ENST00000437811 TCF24Q7RTU0 167 aa10.29□□□□□ -0.76
HLA-DPA1-243ENST00000437811 Q86TA4 180 aa10.29□□□□□ -0.76
HLA-DPA1-243ENST00000437811 TMEM75Q8N9X5 138 aa10.29□□□□□ -0.76
HLA-DPA1-243ENST00000437811 MRPL53Q96EL3 112 aaKnown RBP10.29□□□□□ -0.76
HLA-DPA1-243ENST00000437811 DUX3Q96PT4 197 aa10.29□□□□□ -0.76
HLA-DPA1-243ENST00000437811 CTDSP1Q9GZU7 261 aa10.29□□□□□ -0.76
HLA-DPA1-243ENST00000437811 A0A1B0GUS0 222 aa10.28□□□□□ -0.76
HLA-DPA1-243ENST00000437811 A0A1W2PRX2 142 aa10.28□□□□□ -0.76
HLA-DPA1-243ENST00000437811 K7EN84 100 aa10.28□□□□□ -0.76
HLA-DPA1-243ENST00000437811 K7EQM0 130 aa10.28□□□□□ -0.76
HLA-DPA1-243ENST00000437811 IGLV2-11P01706 119 aa10.28□□□□□ -0.76
HLA-DPA1-243ENST00000437811 BAGE2Q86Y30 109 aa10.28□□□□□ -0.76
HLA-DPA1-243ENST00000437811 SMIM12Q96EX1 92 aa10.28□□□□□ -0.76
HLA-DPA1-243ENST00000437811 RAX2Q96IS3 184 aa10.28□□□□□ -0.76
HLA-DPA1-243ENST00000437811 TUBA4BQ9H853 241 aa10.28□□□□□ -0.76
HLA-DPA1-243ENST00000437811 NRN1Q9NPD7 142 aa10.28□□□□□ -0.76
HLA-DPA1-243ENST00000437811 CLEC5AQ9NY25 188 aa10.28□□□□□ -0.76
HLA-DPA1-243ENST00000437811 TRAV8-1A0A0A6YYK1 113 aa10.27□□□□□ -0.76
HLA-DPA1-243ENST00000437811 M0QZ24 198 aa10.27□□□□□ -0.76
HLA-DPA1-243ENST00000437811 SOCS3O14543 225 aa10.27□□□□□ -0.76
HLA-DPA1-243ENST00000437811 GCGP01275 180 aa10.27□□□□□ -0.76
HLA-DPA1-243ENST00000437811 LTAP01374 205 aa10.27□□□□□ -0.76
HLA-DPA1-243ENST00000437811 CBLN1P23435 193 aa10.27□□□□□ -0.76
HLA-DPA1-243ENST00000437811 FLI1Q01543 452 aaPredicted RBP10.27□□□□□ -0.76
HLA-DPA1-243ENST00000437811 PSG3Q16557 428 aa10.27□□□□□ -0.76
HLA-DPA1-243ENST00000437811 RNF182Q8N6D2 247 aa10.27□□□□□ -0.76
HLA-DPA1-243ENST00000437811 DLX4Q92988 240 aaPredicted RBP10.27□□□□□ -0.76
HLA-DPA1-243ENST00000437811 ANAPC16Q96DE5 110 aa10.27□□□□□ -0.76
HLA-DPA1-243ENST00000437811 C16orf92Q96LL3 132 aa10.27□□□□□ -0.76
HLA-DPA1-243ENST00000437811 SGK494Q96LW2 274 aa10.27□□□□□ -0.76
HLA-DPA1-243ENST00000437811 TMEM242Q9NWH2 141 aa10.27□□□□□ -0.76
HLA-DPA1-243ENST00000437811 PEMTQ9UBM1 199 aa10.27□□□□□ -0.76
HLA-DPA1-243ENST00000437811 ADARB2-AS1A8MUL3 147 aa10.26□□□□□ -0.77
HLA-DPA1-243ENST00000437811 H7BYZ3 331 aa10.26□□□□□ -0.77
HLA-DPA1-243ENST00000437811 J3QL48 77 aa10.26□□□□□ -0.77
HLA-DPA1-243ENST00000437811 CCL24O00175 119 aa10.26□□□□□ -0.77
HLA-DPA1-243ENST00000437811 FOLR2P14207 255 aa10.26□□□□□ -0.77
HLA-DPA1-243ENST00000437811 LCN12Q6JVE5 192 aa10.26□□□□□ -0.77
HLA-DPA1-243ENST00000437811 ADAMTSL5Q6ZMM2 481 aa10.26□□□□□ -0.77
HLA-DPA1-243ENST00000437811 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.26□□□□□ -0.77
HLA-DPA1-243ENST00000437811 NHLRC2Q8NBF2 726 aa10.26□□□□□ -0.77
HLA-DPA1-243ENST00000437811 OR9G4Q8NGQ1 327 aa10.26□□□□□ -0.77
HLA-DPA1-243ENST00000437811 SFRP2Q96HF1 295 aa10.26□□□□□ -0.77
HLA-DPA1-243ENST00000437811 PSG8Q9UQ74 426 aa10.26□□□□□ -0.77
HLA-DPA1-243ENST00000437811 FLNBO75369 2602 aaKnown RBP10.26□□□□□ -0.77
HLA-DPA1-243ENST00000437811 NSD1Q96L73 2696 aaPredicted RBP10.26□□□□□ -0.77
HLA-DPA1-243ENST00000437811 IGKV2-40A0A087WW87 121 aaPredicted RBP10.26□□□□□ -0.77
HLA-DPA1-243ENST00000437811 CXorf65A6NEN9 183 aa10.26□□□□□ -0.77
HLA-DPA1-243ENST00000437811 FBLL1A6NHQ2 334 aaKnown RBP10.26□□□□□ -0.77
HLA-DPA1-243ENST00000437811 ZNF705FA8MVS1 300 aaPredicted RBP10.26□□□□□ -0.77
HLA-DPA1-243ENST00000437811 PPP1R2P9O14990 202 aa10.26□□□□□ -0.77
HLA-DPA1-243ENST00000437811 IGKV2D-40P01614 121 aaPredicted RBP10.26□□□□□ -0.77
HLA-DPA1-243ENST00000437811 PRB4P10163 310 aaPredicted RBP10.26□□□□□ -0.77
HLA-DPA1-243ENST00000437811 MGST1P10620 155 aaKnown RBP10.26□□□□□ -0.77
HLA-DPA1-243ENST00000437811 KRTAP10-3P60369 221 aa10.26□□□□□ -0.77
HLA-DPA1-243ENST00000437811 RPL11P62913 178 aaKnown RBP10.26□□□□□ -0.77
HLA-DPA1-243ENST00000437811 OR5I1Q13606 314 aa10.26□□□□□ -0.77
HLA-DPA1-243ENST00000437811 SAMD13Q5VXD3 122 aa10.26□□□□□ -0.77
HLA-DPA1-243ENST00000437811 PRNTQ86SH4 94 aa10.26□□□□□ -0.77
HLA-DPA1-243ENST00000437811 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.26□□□□□ -0.77
HLA-DPA1-243ENST00000437811 OR10G8Q8NGN5 311 aa10.26□□□□□ -0.77
HLA-DPA1-243ENST00000437811 MLST8Q9BVC4 326 aa10.26□□□□□ -0.77
HLA-DPA1-243ENST00000437811 PRAC2D3DTV9 90 aa10.25□□□□□ -0.77
HLA-DPA1-243ENST00000437811 TMEM183AQ8IXX5 376 aa10.25□□□□□ -0.77
HLA-DPA1-243ENST00000437811 C15orf54Q8N8G6 183 aa10.25□□□□□ -0.77
HLA-DPA1-243ENST00000437811 C20orf173Q96LM9 149 aa10.25□□□□□ -0.77
HLA-DPA1-243ENST00000437811 YPEL4Q96NS1 127 aa10.25□□□□□ -0.77
HLA-DPA1-243ENST00000437811 OSTCQ9NRP0 149 aa10.25□□□□□ -0.77
HLA-DPA1-243ENST00000437811 MLXQ9UH92 298 aa10.25□□□□□ -0.77
HLA-DPA1-243ENST00000437811 SELENOKQ9Y6D0 94 aa10.25□□□□□ -0.77
HLA-DPA1-243ENST00000437811 IGKV3-7A0A075B6H7 116 aa10.24□□□□□ -0.77
HLA-DPA1-243ENST00000437811 RBAKDNA6NC62 111 aa10.24□□□□□ -0.77
HLA-DPA1-243ENST00000437811 CSN3P07498 182 aa10.24□□□□□ -0.77
HLA-DPA1-243ENST00000437811 FOXL1Q12952 345 aa10.24□□□□□ -0.77
HLA-DPA1-243ENST00000437811 NDUFA11Q86Y39 141 aa10.24□□□□□ -0.77
HLA-DPA1-243ENST00000437811 DCANP1Q8TF63 244 aa10.24□□□□□ -0.77
HLA-DPA1-243ENST00000437811 ZFP30Q9Y2G7 519 aa10.24□□□□□ -0.77
HLA-DPA1-243ENST00000437811 F8P00451 2351 aa10.23□□□□□ -0.77
HLA-DPA1-243ENST00000437811 COLCA2A8K830 154 aa10.23□□□□□ -0.77
HLA-DPA1-243ENST00000437811 ERVFC1-1P60608 527 aa10.23□□□□□ -0.77
HLA-DPA1-243ENST00000437811 FAM231DQ6ZW35 169 aa10.23□□□□□ -0.77
HLA-DPA1-243ENST00000437811 ZNF738Q8NE65 137 aa10.23□□□□□ -0.77
HLA-DPA1-243ENST00000437811 VGLL1Q99990 258 aa10.23□□□□□ -0.77
HLA-DPA1-243ENST00000437811 MS4A6AQ9H2W1 248 aa10.23□□□□□ -0.77
HLA-DPA1-243ENST00000437811 BIN3Q9NQY0 253 aa10.23□□□□□ -0.77
HLA-DPA1-243ENST00000437811 ZNF492Q9P255 531 aa10.23□□□□□ -0.77
HLA-DPA1-243ENST00000437811 K7EQG2 157 aa10.22□□□□□ -0.77
HLA-DPA1-243ENST00000437811 OVOL1O14753 267 aa10.22□□□□□ -0.77
HLA-DPA1-243ENST00000437811 ID1P41134 155 aa10.22□□□□□ -0.77
HLA-DPA1-243ENST00000437811 NSUN5P1Q3KNT7 163 aa10.22□□□□□ -0.77
HLA-DPA1-243ENST00000437811 IBA57Q5T440 356 aaKnown RBP10.22□□□□□ -0.77
HLA-DPA1-243ENST00000437811 GBGT1Q8N5D6 347 aa10.22□□□□□ -0.77
HLA-DPA1-243ENST00000437811 RNASE7Q9H1E1 156 aaKnown RBP10.22□□□□□ -0.77
HLA-DPA1-243ENST00000437811 V9GYV3 84 aa10.22□□□□□ -0.77
HLA-DPA1-243ENST00000437811 PFN1P07737 140 aaKnown RBP10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms