RNA–Protein interactions for RNA: ENST00000437654.5

IRF1-203, Transcript of interferon regulatory factor 1, humanhuman

TSL 3

Gene IRF1, Length 832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-203ENST00000437654 MBD3L1Q8WWY6 194 aa13.39□□□□□ -0.27
IRF1-203ENST00000437654 TM2D3Q9BRN9 247 aa13.39□□□□□ -0.27
IRF1-203ENST00000437654 ZMAT4Q9H898 229 aa13.39□□□□□ -0.27
IRF1-203ENST00000437654 RPL35AP18077 110 aaKnown RBP13.38□□□□□ -0.27
IRF1-203ENST00000437654 OR8A1Q8NGG7 326 aa13.38□□□□□ -0.27
IRF1-203ENST00000437654 RXFP4Q8TDU9 374 aa13.38□□□□□ -0.27
IRF1-203ENST00000437654 SPATA25Q9BR10 227 aa13.38□□□□□ -0.27
IRF1-203ENST00000437654 PLA2G2EQ9NZK7 142 aa13.38□□□□□ -0.27
IRF1-203ENST00000437654 TP53TG1Q9Y2A0 90 aa13.38□□□□□ -0.27
IRF1-203ENST00000437654 HMGB3O15347 200 aaKnown RBP13.37□□□□□ -0.27
IRF1-203ENST00000437654 HLA-DMBP28068 263 aa13.37□□□□□ -0.27
IRF1-203ENST00000437654 SULT1A2P50226 295 aa13.37□□□□□ -0.27
IRF1-203ENST00000437654 RANP62826 216 aaKnown RBP13.37□□□□□ -0.27
IRF1-203ENST00000437654 C1QTNF4Q9BXJ3 329 aa13.37□□□□□ -0.27
IRF1-203ENST00000437654 OTORQ9NRC9 128 aa13.37□□□□□ -0.27
IRF1-203ENST00000437654 CSN1S1P47710 185 aa13.36□□□□□ -0.27
IRF1-203ENST00000437654 NKX2-5P52952 324 aaPredicted RBP13.36□□□□□ -0.27
IRF1-203ENST00000437654 ICAM4Q14773 271 aa13.36□□□□□ -0.27
IRF1-203ENST00000437654 GDF5OSQ5U4N7 250 aa13.36□□□□□ -0.27
IRF1-203ENST00000437654 EXOC3-AS1Q8N2X6 119 aa13.36□□□□□ -0.27
IRF1-203ENST00000437654 OR10J6PQ8NGY7 276 aa13.36□□□□□ -0.27
IRF1-203ENST00000437654 NKX6-2Q9C056 277 aaPredicted RBP13.36□□□□□ -0.27
IRF1-203ENST00000437654 Q9H3A6 140 aa13.36□□□□□ -0.27
IRF1-203ENST00000437654 A0A1W2PRE2 83 aa13.35□□□□□ -0.27
IRF1-203ENST00000437654 MAP1LC3B2A6NCE7 125 aa13.35□□□□□ -0.27
IRF1-203ENST00000437654 F6UB75 175 aa13.35□□□□□ -0.27
IRF1-203ENST00000437654 CNN1P51911 297 aaKnown RBP13.35□□□□□ -0.27
IRF1-203ENST00000437654 SSX7Q7RTT5 188 aa13.35□□□□□ -0.27
IRF1-203ENST00000437654 OR4B1Q8NGF8 309 aa13.35□□□□□ -0.27
IRF1-203ENST00000437654 FAM213BQ8TBF2 198 aa13.35□□□□□ -0.27
IRF1-203ENST00000437654 ASCL2Q99929 193 aa13.35□□□□□ -0.27
IRF1-203ENST00000437654 MAP1LC3BQ9GZQ8 125 aa13.35□□□□□ -0.27
IRF1-203ENST00000437654 MEGF8Q7Z7M0 2845 aa13.35□□□□□ -0.27
IRF1-203ENST00000437654 RBAKDNA6NC62 111 aa13.34□□□□□ -0.27
IRF1-203ENST00000437654 ZNF705FA8MVS1 300 aaPredicted RBP13.34□□□□□ -0.27
IRF1-203ENST00000437654 TEX46H3BTG2 121 aa13.34□□□□□ -0.27
IRF1-203ENST00000437654 EIF3GO75821 320 aaKnown RBP eCLIP13.34□□□□□ -0.27
IRF1-203ENST00000437654 AMBPP02760 352 aa13.34□□□□□ -0.27
IRF1-203ENST00000437654 H2AFB1P0C5Y9 115 aa13.34□□□□□ -0.27
IRF1-203ENST00000437654 SFT2D1Q8WV19 159 aa13.34□□□□□ -0.27
IRF1-203ENST00000437654 LINC00477Q96M19 166 aa13.34□□□□□ -0.27
IRF1-203ENST00000437654 TRAV1-1A0A0B4J248 108 aa13.33□□□□□ -0.28
IRF1-203ENST00000437654 PGPA6NDG6 321 aa13.33□□□□□ -0.28
IRF1-203ENST00000437654 CA1P00915 261 aaPredicted RBP13.33□□□□□ -0.28
IRF1-203ENST00000437654 SLC25A5P05141 298 aaKnown RBP13.33□□□□□ -0.28
IRF1-203ENST00000437654 FHITP49789 147 aa13.33□□□□□ -0.28
IRF1-203ENST00000437654 DEFB1P60022 68 aa13.33□□□□□ -0.28
IRF1-203ENST00000437654 HIST1H1AQ02539 215 aaPredicted RBP13.33□□□□□ -0.28
IRF1-203ENST00000437654 CMTM2Q8TAZ6 248 aa13.33□□□□□ -0.28
IRF1-203ENST00000437654 RNF183Q96D59 192 aa13.33□□□□□ -0.28
IRF1-203ENST00000437654 ARL2-SNX15V9GYD0 113 aa13.33□□□□□ -0.28
IRF1-203ENST00000437654 NPIPB6E9PJ23 425 aa13.32□□□□□ -0.28
IRF1-203ENST00000437654 M0R3E3 92 aa13.32□□□□□ -0.28
IRF1-203ENST00000437654 PPT1P50897 306 aa13.32□□□□□ -0.28
IRF1-203ENST00000437654 AMTNQ6UX39 209 aa13.32□□□□□ -0.28
IRF1-203ENST00000437654 C9orf47Q6ZRZ4 202 aa13.32□□□□□ -0.28
IRF1-203ENST00000437654 ODF3Q96PU9 254 aa13.32□□□□□ -0.28
IRF1-203ENST00000437654 PPP1R14DQ9NXH3 145 aa13.32□□□□□ -0.28
IRF1-203ENST00000437654 SERTM2A0A1B0GWG4 89 aa13.31□□□□□ -0.28
IRF1-203ENST00000437654 PRAC2D3DTV9 90 aa13.31□□□□□ -0.28
IRF1-203ENST00000437654 SPRY2O43597 315 aa13.31□□□□□ -0.28
IRF1-203ENST00000437654 HBE1P02100 147 aa13.31□□□□□ -0.28
IRF1-203ENST00000437654 GIG44P09565 113 aaPredicted RBP13.31□□□□□ -0.28
IRF1-203ENST00000437654 RCHY1Q96PM5 261 aa13.31□□□□□ -0.28
IRF1-203ENST00000437654 TRBV7-9A0A0J9YWB2 115 aa13.3□□□□□ -0.28
IRF1-203ENST00000437654 DIRC3C9JPN6 131 aa13.3□□□□□ -0.28
IRF1-203ENST00000437654 IGKV3-20P01619 116 aa13.3□□□□□ -0.28
IRF1-203ENST00000437654 TSPOP30536 169 aa13.3□□□□□ -0.28
IRF1-203ENST00000437654 FGF8P55075 233 aaPredicted RBP13.3□□□□□ -0.28
IRF1-203ENST00000437654 IQCF2Q8IXL9 164 aa13.3□□□□□ -0.28
IRF1-203ENST00000437654 C5orf17Q8NAS9 161 aa13.3□□□□□ -0.28
IRF1-203ENST00000437654 CSNK1G2-AS1Q8NCQ2 148 aa13.3□□□□□ -0.28
IRF1-203ENST00000437654 BOLA1Q9Y3E2 137 aa13.3□□□□□ -0.28
IRF1-203ENST00000437654 NMBP08949 121 aa13.29□□□□□ -0.28
IRF1-203ENST00000437654 ZNF705DP0CH99 300 aaPredicted RBP13.29□□□□□ -0.28
IRF1-203ENST00000437654 ZNF705BP0CI00 300 aaPredicted RBP13.29□□□□□ -0.28
IRF1-203ENST00000437654 SUMO1P63165 101 aaKnown RBP13.29□□□□□ -0.28
IRF1-203ENST00000437654 PMS2P11Q13670 270 aa13.29□□□□□ -0.28
IRF1-203ENST00000437654 OVOL2Q9BRP0 275 aa13.29□□□□□ -0.28
IRF1-203ENST00000437654 TCEAL7Q9BRU2 100 aa13.29□□□□□ -0.28
IRF1-203ENST00000437654 TMPRSS5Q9H3S3 457 aa13.29□□□□□ -0.28
IRF1-203ENST00000437654 FBLL1A6NHQ2 334 aaKnown RBP13.28□□□□□ -0.28
IRF1-203ENST00000437654 BOLA2-SMG1P6H3BVE0 249 aa13.28□□□□□ -0.28
IRF1-203ENST00000437654 CDKN1BP46527 198 aa13.28□□□□□ -0.28
IRF1-203ENST00000437654 BLOC1S1P78537 153 aa13.28□□□□□ -0.28
IRF1-203ENST00000437654 DEFB135Q30KP9 77 aa13.28□□□□□ -0.28
IRF1-203ENST00000437654 TMEM78Q5T7P6 136 aa13.28□□□□□ -0.28
IRF1-203ENST00000437654 AGPAT4-IT1Q9H0P7 198 aa13.28□□□□□ -0.28
IRF1-203ENST00000437654 LENEPQ9Y5L5 61 aa13.28□□□□□ -0.28
IRF1-203ENST00000437654 U3KQK5 164 aa13.28□□□□□ -0.28
IRF1-203ENST00000437654 FAM74A7A6NL05 159 aa13.27□□□□□ -0.29
IRF1-203ENST00000437654 K7EQM0 130 aa13.27□□□□□ -0.29
IRF1-203ENST00000437654 LEPP41159 167 aa13.27□□□□□ -0.29
IRF1-203ENST00000437654 IGF2BP2-AS1Q96M15 143 aa13.27□□□□□ -0.29
IRF1-203ENST00000437654 C20orf144Q9BQM9 153 aa13.27□□□□□ -0.29
IRF1-203ENST00000437654 SLC35B3Q9H1N7 401 aa13.27□□□□□ -0.29
IRF1-203ENST00000437654 XCL2Q9UBD3 114 aa13.27□□□□□ -0.29
IRF1-203ENST00000437654 EPDR1Q9UM22 224 aa13.27□□□□□ -0.29
IRF1-203ENST00000437654 ZNF705EA8MWA4 302 aaPredicted RBP13.26□□□□□ -0.29
IRF1-203ENST00000437654 CT45A10P0DMU9 189 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms