RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 MDFIC2A0A1B0GVS7 189 aa2.45□□□□□ -2.02
HMGB1P45-201ENST00000435986 YPEL1O60688 119 aa2.45□□□□□ -2.02
HMGB1P45-201ENST00000435986 MPC2O95563 127 aa2.45□□□□□ -2.02
HMGB1P45-201ENST00000435986 PMP2P02689 132 aa2.45□□□□□ -2.02
HMGB1P45-201ENST00000435986 CD2P06729 351 aa2.45□□□□□ -2.02
HMGB1P45-201ENST00000435986 SPINK8P0C7L1 97 aa2.45□□□□□ -2.02
HMGB1P45-201ENST00000435986 ZNF705BP0CI00 300 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P45-201ENST00000435986 CD24P25063 80 aa2.45□□□□□ -2.02
HMGB1P45-201ENST00000435986 SUPT4H1P63272 117 aaKnown RBP2.45□□□□□ -2.02
HMGB1P45-201ENST00000435986 ZNF90Q03938 601 aa2.45□□□□□ -2.02
HMGB1P45-201ENST00000435986 CDK5R1Q15078 307 aa2.45□□□□□ -2.02
HMGB1P45-201ENST00000435986 DEFB134Q4QY38 66 aa2.45□□□□□ -2.02
HMGB1P45-201ENST00000435986 PATE2Q6UY27 113 aa2.45□□□□□ -2.02
HMGB1P45-201ENST00000435986 SVBPQ8N300 66 aa2.45□□□□□ -2.02
HMGB1P45-201ENST00000435986 TTC9CQ8N5M4 171 aa2.45□□□□□ -2.02
HMGB1P45-201ENST00000435986 C3orf56Q8N813 242 aa2.45□□□□□ -2.02
HMGB1P45-201ENST00000435986 SLC35B3Q9H1N7 401 aa2.45□□□□□ -2.02
HMGB1P45-201ENST00000435986 C16orf95Q9H693 158 aa2.45□□□□□ -2.02
HMGB1P45-201ENST00000435986 LSM2Q9Y333 95 aaKnown RBP2.45□□□□□ -2.02
HMGB1P45-201ENST00000435986 DSCAMO60469 2012 aa2.45□□□□□ -2.02
HMGB1P45-201ENST00000435986 CFTRP13569 1480 aa2.45□□□□□ -2.02
HMGB1P45-201ENST00000435986 IFT140Q96RY7 1462 aa2.45□□□□□ -2.02
HMGB1P45-201ENST00000435986 COL4A4P53420 1690 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P45-201ENST00000435986 NSD3Q9BZ95 1437 aa2.44□□□□□ -2.02
HMGB1P45-201ENST00000435986 KIAA1107Q9UPP5 1409 aa2.44□□□□□ -2.02
HMGB1P45-201ENST00000435986 NUP210LQ5VU65 1888 aa2.44□□□□□ -2.02
HMGB1P45-201ENST00000435986 IGKV1D-37A0A075B6S9 117 aa2.44□□□□□ -2.02
HMGB1P45-201ENST00000435986 IGKV3D-11A0A0A0MRZ8 115 aa2.44□□□□□ -2.02
HMGB1P45-201ENST00000435986 GEMIN2O14893 280 aaKnown RBP2.44□□□□□ -2.02
HMGB1P45-201ENST00000435986 TIMM17BO60830 172 aa2.44□□□□□ -2.02
HMGB1P45-201ENST00000435986 RBP4P02753 201 aa2.44□□□□□ -2.02
HMGB1P45-201ENST00000435986 IFITM1P13164 125 aa2.44□□□□□ -2.02
HMGB1P45-201ENST00000435986 RPL28P46779 137 aaKnown RBP2.44□□□□□ -2.02
HMGB1P45-201ENST00000435986 FOXA1P55317 472 aa2.44□□□□□ -2.02
HMGB1P45-201ENST00000435986 PCBD1P61457 104 aa2.44□□□□□ -2.02
HMGB1P45-201ENST00000435986 ZNF117Q03924 483 aa2.44□□□□□ -2.02
HMGB1P45-201ENST00000435986 Q56UQ5 140 aa2.44□□□□□ -2.02
HMGB1P45-201ENST00000435986 PABPC1L2AQ5JQF8 200 aa2.44□□□□□ -2.02
HMGB1P45-201ENST00000435986 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P45-201ENST00000435986 DYNAPQ8N1N2 210 aa2.44□□□□□ -2.02
HMGB1P45-201ENST00000435986 C10orf111Q8N326 155 aa2.44□□□□□ -2.02
HMGB1P45-201ENST00000435986 PLPP5Q8NEB5 264 aa2.44□□□□□ -2.02
HMGB1P45-201ENST00000435986 FGF13Q92913 245 aa2.44□□□□□ -2.02
HMGB1P45-201ENST00000435986 TVP23CQ96ET8 276 aa2.44□□□□□ -2.02
HMGB1P45-201ENST00000435986 PKMYT1Q99640 499 aa2.44□□□□□ -2.02
HMGB1P45-201ENST00000435986 SEC11CQ9BY50 192 aa2.44□□□□□ -2.02
HMGB1P45-201ENST00000435986 AGPAT4-IT1Q9H0P7 198 aa2.44□□□□□ -2.02
HMGB1P45-201ENST00000435986 BCL2L10Q9HD36 194 aa2.44□□□□□ -2.02
HMGB1P45-201ENST00000435986 NHP2Q9NX24 153 aaKnown RBP2.44□□□□□ -2.02
HMGB1P45-201ENST00000435986 NOP16Q9Y3C1 178 aaKnown RBP2.44□□□□□ -2.02
HMGB1P45-201ENST00000435986 CHCHD2Q9Y6H1 151 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P45-201ENST00000435986 SEC16AO15027 2179 aa2.44□□□□□ -2.02
HMGB1P45-201ENST00000435986 ECM29Q5VYK3 1845 aa2.44□□□□□ -2.02
HMGB1P45-201ENST00000435986 CCDC18Q5T9S5 1454 aa2.44□□□□□ -2.02
HMGB1P45-201ENST00000435986 DNMBPQ6XZF7 1577 aa2.44□□□□□ -2.02
HMGB1P45-201ENST00000435986 COL18A1P39060 1754 aa2.44□□□□□ -2.02
HMGB1P45-201ENST00000435986 ANKRD31Q8N7Z5 1873 aa2.43□□□□□ -2.02
HMGB1P45-201ENST00000435986 SHROOM3Q8TF72 1996 aa2.43□□□□□ -2.02
HMGB1P45-201ENST00000435986 LOC107986453A0A1B0GWG9 222 aa2.43□□□□□ -2.02
HMGB1P45-201ENST00000435986 TMEM235A6NFC5 223 aa2.43□□□□□ -2.02
HMGB1P45-201ENST00000435986 LYRM1O43325 122 aa2.43□□□□□ -2.02
HMGB1P45-201ENST00000435986 OR1I1O60431 355 aa2.43□□□□□ -2.02
HMGB1P45-201ENST00000435986 IGKV4-1P06312 121 aa2.43□□□□□ -2.02
HMGB1P45-201ENST00000435986 CTSDP07339 412 aaPredicted RBP2.43□□□□□ -2.02
HMGB1P45-201ENST00000435986 GZMBP10144 247 aa2.43□□□□□ -2.02
HMGB1P45-201ENST00000435986 COX6A1P12074 109 aa2.43□□□□□ -2.02
HMGB1P45-201ENST00000435986 FABP4P15090 132 aa2.43□□□□□ -2.02
HMGB1P45-201ENST00000435986 FUSP35637 526 aaKnown RBP eCLIP2.43□□□□□ -2.02
HMGB1P45-201ENST00000435986 BLCAPP62952 87 aa2.43□□□□□ -2.02
HMGB1P45-201ENST00000435986 FAM229BQ4G0N7 80 aa2.43□□□□□ -2.02
HMGB1P45-201ENST00000435986 PYDC2Q56P42 97 aa2.43□□□□□ -2.02
HMGB1P45-201ENST00000435986 C9orf153Q5TBE3 101 aa2.43□□□□□ -2.02
HMGB1P45-201ENST00000435986 FOXI2Q6ZQN5 318 aa2.43□□□□□ -2.02
HMGB1P45-201ENST00000435986 Q6ZUT4 128 aa2.43□□□□□ -2.02
HMGB1P45-201ENST00000435986 AQP3Q92482 292 aa2.43□□□□□ -2.02
HMGB1P45-201ENST00000435986 RAB37Q96AX2 223 aa2.43□□□□□ -2.02
HMGB1P45-201ENST00000435986 CHCHD1Q96BP2 118 aaKnown RBP2.43□□□□□ -2.02
HMGB1P45-201ENST00000435986 MRPS24Q96EL2 167 aaKnown RBP2.43□□□□□ -2.02
HMGB1P45-201ENST00000435986 LINC00467Q9BRT7 94 aa2.43□□□□□ -2.02
HMGB1P45-201ENST00000435986 TIMM9Q9Y5J7 89 aa2.43□□□□□ -2.02
HMGB1P45-201ENST00000435986 HSPE1-MOB4S4R3N1 261 aa2.43□□□□□ -2.02
HMGB1P45-201ENST00000435986 MAST2Q6P0Q8 1798 aa2.43□□□□□ -2.02
HMGB1P45-201ENST00000435986 NOTCH2Q04721 2471 aa2.43□□□□□ -2.02
HMGB1P45-201ENST00000435986 RIC1Q4ADV7 1423 aa2.42□□□□□ -2.02
HMGB1P45-201ENST00000435986 MAPKBP1O60336 1514 aa2.42□□□□□ -2.02
HMGB1P45-201ENST00000435986 KDM6BO15054 1643 aa2.42□□□□□ -2.02
HMGB1P45-201ENST00000435986 SIPA1L1O43166 1804 aa2.42□□□□□ -2.02
HMGB1P45-201ENST00000435986 FANCMQ8IYD8 2048 aa2.42□□□□□ -2.02
HMGB1P45-201ENST00000435986 PPRC1Q5VV67 1664 aaKnown RBP2.42□□□□□ -2.02
HMGB1P45-201ENST00000435986 COL1A1P02452 1464 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P45-201ENST00000435986 GAPVD1Q14C86 1478 aa2.42□□□□□ -2.02
HMGB1P45-201ENST00000435986 IGLV3-9A0A075B6K5 115 aa2.42□□□□□ -2.02
HMGB1P45-201ENST00000435986 C3orf85A0A1B0GTC6 90 aa2.42□□□□□ -2.02
HMGB1P45-201ENST00000435986 C17orf98A8MV24 154 aa2.42□□□□□ -2.02
HMGB1P45-201ENST00000435986 H3BPC8 53 aa2.42□□□□□ -2.02
HMGB1P45-201ENST00000435986 APOC4-APOC2K7ER74 178 aa2.42□□□□□ -2.02
HMGB1P45-201ENST00000435986 APOC2P02655 101 aa2.42□□□□□ -2.02
HMGB1P45-201ENST00000435986 CD3DP04234 171 aa2.42□□□□□ -2.02
HMGB1P45-201ENST00000435986 SAA1P0DJI8 122 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P45-201ENST00000435986 SLC25A4P12235 298 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms